prot_D-dudresnayi_contig10356.377.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10356.377.1
Unique Nameprot_D-dudresnayi_contig10356.377.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length568
Homology
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BLAST of mRNA_D-dudresnayi_contig10356.377.1 vs. uniprot
Match: D8LQQ1_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ1_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 3.130e-15
Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 0 
Query:  518 FIPDKMVSVDMGAAWIHGTSGNPVTALCEKCSLSMFNTGSPTLFVDYNGR 567
            F+PDKMVSVDMGAAWIHGT+ NP+TALCEK SL +FNTGSPT+ VD++GR
Sbjct:  795 FVPDKMVSVDMGAAWIHGTTKNPITALCEKFSLGLFNTGSPTVMVDHDGR 844
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BLAST of mRNA_D-dudresnayi_contig10356.377.1 vs. uniprot
Match: A0A6H5KIY4_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY4_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 3.400e-15
Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 0 
Query:  518 FIPDKMVSVDMGAAWIHGTSGNPVTALCEKCSLSMFNTGSPTLFVDYNGR 567
            F+PDKMVSVDMGAAWIHGT+ NP+TALCEK SL +FNTGSPT+ VD++GR
Sbjct: 1006 FVPDKMVSVDMGAAWIHGTTKNPITALCEKFSLGLFNTGSPTVMVDHDGR 1055
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10356.377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQQ1_ECTSI3.130e-1578.00PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KIY4_9PHAE3.400e-1578.00PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10356contigD-dudresnayi_contig10356:6418..10220 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10356.377.1mRNA_D-dudresnayi_contig10356.377.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10356 6418..10220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10356.377.1 ID=prot_D-dudresnayi_contig10356.377.1|Name=mRNA_D-dudresnayi_contig10356.377.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=568bp
GRGRGRGSGTGKGGGGGRGRGRGRGRGPGGLLAEAAAFIGVVDGQLTKME
VSSDDERGTVRRAGQHTGGSAGGVKRRRTNAISKGSGVASGQVQMGFEGG
CYLSTQIHNRRYLGVMLEADEVIAAVTAATAAASREGRAGANARGPPSLL
DLLILKQIRGSMPDFDPVNLVVLPSPSSPAVPQYQHQQQPPTVAAAVSAS
ASLVSSAAVVRRQSANLLPHAEAPVASAAERDPPAGDTRDLLRSRTDPWV
QQLERQQQQQQQQPQQPESVPNGKRRRPNVPRAAVARQRVGGRCYTKRWI
SSGSQTAAAPQRASSSSSPRAAAAGSRSAPSAKTSGQQQQHQQQQRQQQS
PAGADNRSRAVTTATSTPTPPPPQQPVGSDGAMAGAVPPAGGTEERTAHV
GPRVENVALRPSGGVETAGATAGVGTNGHPPVSAHGGTAPPSVGEQRVSG
ASSSSTGKVLRGEEAVVAAGVTGKAPGSSAGGSSPAATVGGEGKGQGAAV
PVAMDVADVERGVMESPFIPDKMVSVDMGAAWIHGTSGNPVTALCEKCSL
SMFNTGSPTLFVDYNGR*
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