mRNA_D-dudresnayi_contig10354.374.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10354.374.1
Unique NamemRNA_D-dudresnayi_contig10354.374.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10354.374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10354contigD-dudresnayi_contig10354:8645..10067 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score69.3
Seed ortholog evalue9.6e-10
Seed eggNOG ortholog2880.D7FVI2
Preferred namePEX1
KEGG koko:K05093,ko:K13338,ko:K13525
KEGG TC3.A.16.1,3.A.20.1
KEGG Pathwayko01521,ko04010,ko04014,ko04015,ko04141,ko04144,ko04146,ko04151,ko04550,ko04810,ko05134,ko05200,ko05215,ko05226,ko05230,map01521,map04010,map04014,map04015,map04141,map04144,map04146,map04151,map04550,map04810,map05134,map05200,map05215,map05226,map05230
KEGG ModuleM00400,M00403
GOsGO:0000003,GO:0000166,GO:0001881,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005829,GO:0006605,GO:0006625,GO:0006810,GO:0006886,GO:0006996,GO:0007017,GO:0007031,GO:0007275,GO:0007276,GO:0007283,GO:0007399,GO:0007417,GO:0007422,GO:0008022,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0010001,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016043,GO:0016462,GO:0016558,GO:0016562,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017038,GO:0017076,GO:0017111,GO:0019953,GO:0021782,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0030154,GO:0030554,GO:0031090,GO:0031903,GO:0032501,GO:0032502,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0033036,GO:0033365,GO:0034613,GO:0035639,GO:0036094,GO:0042063,GO:0042579,GO:0042623,GO:0042886,GO:0043112,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043574,GO:0044237,GO:0044260,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044743,GO:0044877,GO:0045184,GO:0046907,GO:0046982,GO:0046983,GO:0048137,GO:0048232,GO:0048468,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0051179,GO:0051234,GO:0051301,GO:0051640,GO:0051641,GO:0051649,GO:0051704,GO:0055085,GO:0060151,GO:0060152,GO:0065002,GO:0065007,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072662,GO:0072663,GO:0097159,GO:0097367,GO:0098588,GO:0098805,GO:1901265,GO:1901363
EggNOG free text desc.establishment of protein localization to peroxisome
EggNOG OGsCOG0464@1,COG0554@1,KOG0728@2759,KOG0735@2759
EC2.7.10.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00536,ko01000,ko01001,ko01020,ko03019,ko04050,ko04090,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Exons2
Model size254
Cds size252
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927533.4889348-CDS-D-dudresnayi_contig10354:8644..87021622927533.4889348-CDS-D-dudresnayi_contig10354:8644..8702Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10354 8645..8702 +
1690556796.4414613-CDS-D-dudresnayi_contig10354:8644..87021690556796.4414613-CDS-D-dudresnayi_contig10354:8644..8702Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10354 8645..8702 +
1622927533.519396-CDS-D-dudresnayi_contig10354:9873..100671622927533.519396-CDS-D-dudresnayi_contig10354:9873..10067Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10354 9874..10067 +
1690556796.453988-CDS-D-dudresnayi_contig10354:9873..100671690556796.453988-CDS-D-dudresnayi_contig10354:9873..10067Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10354 9874..10067 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10354.374.1prot_D-dudresnayi_contig10354.374.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10354 8645..10067 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10354.374.1

>prot_D-dudresnayi_contig10354.374.1 ID=prot_D-dudresnayi_contig10354.374.1|Name=mRNA_D-dudresnayi_contig10354.374.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=84bp
EVAVSPKPRRRPRANHGKEARPHFFRASGLLRIAPSPPRRQNTFYGGDDG
AGAGCVGRPAVLAHPSTLVEIDGWNARYLFIYW*
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mRNA from alignment at D-dudresnayi_contig10354:8645..10067+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10354.374.1 ID=mRNA_D-dudresnayi_contig10354.374.1|Name=mRNA_D-dudresnayi_contig10354.374.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1423bp|location=Sequence derived from alignment at D-dudresnayi_contig10354:8645..10067+ (Desmarestia dudresnayi DdudBR16 monoicous)
GAAGTGGCTGTCTCGCCCAAGCCTCGGCGTAGGCCGCGTGCGAATCATGG
GAAAGAAGGTGAAACGACGTTTTTTGTTTTTTGTTTTGTATCGTTTATTT
TTATACTTGTTTCTGTGTAGACTCCTTGCACCACTTTGTGGCCACGGAAC
TTATATCTCTATTGATAGGAGGAAGAAGTGGGATCAGAACGTACAATGGA
ATATGGACGTGCGGGGTGTTAAGATAACAACAGCAACGACAATAACAGTA
ACAAGTATCATACTTCGTACTTCAGTATCACTTTTAAGCTATCACTTTCT
CTTCTGAGCGGTTGAATTCGATGAAATGTCATTGTTTTCCCCGTAAGCAG
GAGATATGGTGAGGTGGGTATGGTTCCCAACCTTTGATATTCTTCGACGT
CTTTTTCGGACAAAAAAAAAATATCGTGAGAGCGCGATTTGTTTTCGTTA
ACTGCTTCTTCCGACGAGAGTCCCGTGAACTGTCTGTGGCAAGGGTTGAC
CAATAAAACTCCCACGTTGCGAAAAAGCGAAGGCTCGAAGGATGCTGTTG
TCCTATCCTAGCGCGCTATTAGGACTGAATGTATAGGCACAAAATTCGTT
CCATCACTGGCACACCAGAAAAATCGTCGCGAGCAGTGATAAAAAATTGA
CACACGTGGTATACAGTATGACGCCATGACACCATTTGTATGTATTTTTA
CTCCGGCCCGCATGTATATTTTCTACTTTCTATTCTGCACGTTGTATTTT
GACGTTATACGTTGTATTTTGTACTGTTGACGTCGTAAACAACAATTTGC
GAAGCGTACGACTGGGCGAATTGTCCGACCATACACGGAGTTAGTTGCAT
TGTAGCCCTCCCCCCCCCCCTCCCTCGATTAAACGACCAAGGCAAGCAAA
AACTGAGTACCCCCCCCCCCCTCCCCTCGTATGGCAGCCCGTGCTGCGGT
GTATGCTCGCCTGTCTTGTTGTCCTGCGACTCTATCGTGACAACCCGACG
AGGTGCAATAGAGTGAGAAAGAGAGAACCTCATTGGTTGATTAATTCATT
CATGCTTTCATTTATTCATTTACCCCTTCGTTTACTCCTTCATTCAGCCA
GGAATGGCGGATCTTAATTTGAGCGGCTTACTAGATTCGTGGGCTTCTAT
TGGCACATTTCGCTTGTTTATCCCCCATCGAATGTTTTGGTGTTGTTGTT
TGTCTGACATGTGCCCCGGCGCGACCAAGCCCGACCGCATTTTTTCCGCG
CTAGCGGCCTGCTGAGGATCGCTCCGTCGCCTCCCCGACGACAAAACACC
TTTTACGGTGGTGACGATGGAGCTGGAGCTGGGTGCGTGGGTCGGCCGGC
CGTGCTCGCCCACCCGTCTACCTTGGTGGAGATAGACGGCTGGAACGCCA
GGTATTTATTTATATACTGGTAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10354:8645..10067+

>mRNA_D-dudresnayi_contig10354.374.1 ID=mRNA_D-dudresnayi_contig10354.374.1|Name=mRNA_D-dudresnayi_contig10354.374.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=504bp|location=Sequence derived from alignment at D-dudresnayi_contig10354:8645..10067+ (Desmarestia dudresnayi DdudBR16 monoicous)
GAAGTGGCTGTCTCGCCCAAGCCTCGGCGTAGGCCGCGTGCGAATCATGG
GAAAGAAGGAAGTGGCTGTCTCGCCCAAGCCTCGGCGTAGGCCGCGTGCG
AATCATGGGAAAGAAGCCCGACCGCATTTTTTCCGCGCTAGCGGCCTGCT
GAGGATCGCTCCGTCGCCTCCCCGACGACAAAACACCTTTTACGGTGGTG
ACGATGGAGCTGGAGCTGGGTGCGTGGGTCGGCCGGCCGTGCTCGCCCAC
CCGTCTACCTTGGTGGAGATAGACGGCTGGAACGCCAGGTATTTATTTAT
ATACTGGTAACCCGACCGCATTTTTTCCGCGCTAGCGGCCTGCTGAGGAT
CGCTCCGTCGCCTCCCCGACGACAAAACACCTTTTACGGTGGTGACGATG
GAGCTGGAGCTGGGTGCGTGGGTCGGCCGGCCGTGCTCGCCCACCCGTCT
ACCTTGGTGGAGATAGACGGCTGGAACGCCAGGTATTTATTTATATACTG
GTAA
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