mRNA_D-dudresnayi_contig10350.373.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10350.373.1
Unique NamemRNA_D-dudresnayi_contig10350.373.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig10350.373.1 vs. uniprot
Match: D7FQ06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ06_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 4.600e-103
Identity = 155/192 (80.73%), Postives = 172/192 (89.58%), Query Frame = 1 
Query:  340 SAVLS-PMEVVATEFDSSRPHTRRPNVAYHVVGVDDGLVPRSSWNTAEGLQPTISAFFRRTFLPAGYPSSVRKEYMEYQTWDTVQALCSYLRGVLCLTATLHASGVGDEHASAIAAAMVWVFRDGFGMVGSLLFSYLASSRMDSNIKEWRLFADIANDVGLTLDLIAPIFREHFALVSSLATMCKALCGVAA 912
            S VLS P +VVA EFDSSRP +RRP V+Y V+G D+GLVP++SWN  +  QP++SAF RRTFLP GYPSSVRKEYMEYQTWDTVQALCSYLRGVLCLTA LHASGVGDE+ASAIAAAMVWV RDGFGM+GSLLFSY ASS MDSNIKEWRLFADIANDVGLTLDL+AP+FR +FA+VSSLAT+ KALCGVAA
Sbjct:   10 SGVLSAPPQVVAVEFDSSRPDSRRPVVSYRVLGQDEGLVPQNSWNRVKRFQPSMSAFVRRTFLPTGYPSSVRKEYMEYQTWDTVQALCSYLRGVLCLTAMLHASGVGDENASAIAAAMVWVLRDGFGMIGSLLFSYAASSHMDSNIKEWRLFADIANDVGLTLDLVAPVFRGNFAVVSSLATVFKALCGVAA 201
[Close]
BLAST of mRNA_D-dudresnayi_contig10350.373.1 vs. uniprot
Match: A0A7S2TJN0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TJN0_9EUKA)

HSP 1 Score: 177 bits (450), Expect = 7.180e-52
Identity = 86/139 (61.87%), Postives = 103/139 (74.10%), Query Frame = 1 
Query:  496 ISAFFRRTFLPAGYPSSVRKEYMEYQTWDTVQALCSYLRGVLCLTATLHASGVGDEHASAIAAAMVWVFRDGFGMVGSLLFSYLASSRMDSNIKEWRLFADIANDVGLTLDLIAPIFREHFALVSSLATMCKALCGVAA 912
            I+  FR  FLP GYPSSV  EY+EYQ WDTVQALCSYLRGVL   A     GVG+  A+A AA + WV +DGFGMVGSLLF+ L     D+N+K WRLFAD+ N+VGL LD+IAP+ +E+F LV   AT+CKA+CGVAA
Sbjct:    8 ITDVFRSVFLPIGYPSSVATEYLEYQAWDTVQALCSYLRGVLAAKAWFEGVGVGNTEATAAAATLQWVMKDGFGMVGSLLFASLCGPYFDTNVKSWRLFADLINNVGLFLDMIAPLTQEYFLLVVCFATICKAMCGVAA 146
[Close]
BLAST of mRNA_D-dudresnayi_contig10350.373.1 vs. uniprot
Match: A0A7R9UTE8_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UTE8_DIALT)

HSP 1 Score: 177 bits (450), Expect = 9.510e-51
Identity = 88/155 (56.77%), Postives = 110/155 (70.97%), Query Frame = 1 
Query:  448 LVPRSSWNTAEGLQPTISAFFRRTFLPAGYPSSVRKEYMEYQTWDTVQALCSYLRGVLCLTATLHASGVGDEHASAIAAAMVWVFRDGFGMVGSLLFSYLASSRMDSNIKEWRLFADIANDVGLTLDLIAPIFREHFALVSSLATMCKALCGVAA 912
            L PR S +  E L     + F R FLP G+P SVR EY  YQ +DT+QALCSYLRG+L  TA L ASGVG+E AS +AAA+ WV RDGFGM+GSL+F++   SR D  +KEWRLFAD+ NDVGL+LD++AP+      L++S   MCK +CGVAA
Sbjct:   36 LSPRISASARERLW----SLFARVFLPDGFPHSVRPEYATYQLYDTLQALCSYLRGILTTTAILEASGVGNETASPLAAAVAWVLRDGFGMLGSLIFAFCVGSRFDGGVKEWRLFADLINDVGLSLDMVAPLLPHRVLLLTSCGAMCKTMCGVAA 186
[Close]
BLAST of mRNA_D-dudresnayi_contig10350.373.1 vs. uniprot
Match: A0A7S2CTD9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTD9_9STRA)

HSP 1 Score: 171 bits (434), Expect = 5.970e-49
Identity = 83/132 (62.88%), Postives = 102/132 (77.27%), Query Frame = 1 
Query:  520 FLPAGYPSSVRKEYMEYQTWDTVQALCSYLRGVLCLTATLHASGVGDEHASAIAAAMVWVFRDGFGMVGSLLFSYLASSRMDSNIKEWRLFADIANDVGLTLDLIAPIF-REHFALVSSLATMCKALCGVAA 912
            FLP G+P SVR EY+ YQ WDTVQALCSYLRG+    A L + GVGD +ASA++AA+ W+ RDG GMVGSLL SY A S  D+++KEWRLFAD+ NDVGLTLD++AP   R +F LV  L T+CKA+CGV+A
Sbjct:   17 FLPVGFPGSVRPEYLTYQIWDTVQALCSYLRGIFSTRAVLVSVGVGDSNASAMSAAVTWILRDGAGMVGSLLLSYGAGSSFDAHLKEWRLFADVINDVGLTLDMLAPHTPRRYFGLVLGLGTVCKAMCGVSA 148
[Close]
BLAST of mRNA_D-dudresnayi_contig10350.373.1 vs. uniprot
Match: W7U4R7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4R7_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.770e-48
Identity = 88/134 (65.67%), Postives = 104/134 (77.61%), Query Frame = 1 
Query:  517 TFLPAGYPSSVRKEYMEYQTWDTVQALCSYLRGVLCLTATLHASGVGDEHASAIAAAMVWVFRDGFGMVGSLLFSYLASSRMDSNIKEWRLFADIANDVGLTLDLIA--PIFREHFALVSSLATMCKALCGVAA 912
            TFLP GYP SVR+EY+ YQ WDTVQALCSYLRG+L   A L  SGVG E ASA++AAM WVFRDG GM  SLLFS +AS   D N+KEWRLFADI+NDVGLTLD++   P  + HF L++ L+T+CK +CGVAA
Sbjct:   62 TFLPVGYPYSVREEYLTYQIWDTVQALCSYLRGILTTKAILEGSGVGSEAASALSAAMNWVFRDGVGMACSLLFSSMASISFDCNVKEWRLFADISNDVGLTLDMLTGLPSLKGHFLLLTCLSTVCKTMCGVAA 195
[Close]
BLAST of mRNA_D-dudresnayi_contig10350.373.1 vs. uniprot
Match: A0A662WPM7_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WPM7_9STRA)

HSP 1 Score: 172 bits (437), Expect = 5.380e-47
Identity = 92/197 (46.70%), Postives = 123/197 (62.44%), Query Frame = 1 
Query:  361 EVVATEFD--------SSRPHTRR-----PNVAYHVVGVDDGLVPRSSWNTAEGLQPTISAFFRRTFLPAGYPSSVRKEYMEYQTWDTVQALCSYLRGVLCLTATLHASGVGDEHASAIAAAMVWVFRDGFGMVGSLLFSYLASSRMDSNIKEWRLFADIANDVGLTLDLIAPIFREHFALVSSLATMCKALCGVAA 912
            +V ATEFD         +R + R+     P+V    V    GL   S+  T  GL   +    +  FLPAGYP SV ++Y+ +Q WDT+QA+CSYLRGVL   + L + GVGDEHA+ +AAA+ WV RDG GM+G L F+YL   + D N+K WRLFAD+ NDVGLTLD++AP F      V  ++++CK +CGVAA
Sbjct:   33 DVCATEFDVRPVCAGEPARRYLRQGERLTPSVHGRTVTRASGLASLSTCFTLAGLTREL----QEMFLPAGYPDSVSEDYLAFQFWDTMQAMCSYLRGVLATQSVLQSVGVGDEHATPLAAALQWVLRDGSGMIGGLTFAYLVGPKFDVNVKRWRLFADVINDVGLTLDMVAPYFPTLVTEVLCVSSVCKTMCGVAA 225
[Close]
BLAST of mRNA_D-dudresnayi_contig10350.373.1 vs. uniprot
Match: A0A813KE75_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KE75_POLGL)

HSP 1 Score: 171 bits (432), Expect = 5.240e-46
Identity = 95/201 (47.26%), Postives = 123/201 (61.19%), Query Frame = 1 
Query:  328 EPNGSAVLSPMEVVATEFDSSRPHTRRPNVAYHVVG----VDDGLVPRSSW--NTAEGLQPTISAFFRRTFLPAGYPSSVRKEYMEYQTWDTVQALCSYLRGVLCLTATLHASGVGDEHASAIAAAMVWVFRDGFGMVGSLLFSYLASSRMDSNIKEWRLFADIANDVGLTLDLIAPIFREHFALVSSLATMCKALCGVAA 912
            EP  S   S + +  +EFD +RP + +  + Y        V D   PR S   + A     ++ A     FLP GYP SV KEY  YQ WDTVQA+CSYLRGVL   A L   GVG E A+A+AA ++WV +DG GMVG L F+   S   D N+K WRLFAD+AN+VGLTLDL+AP+  ++F LV  +A + KA+CGV+A
Sbjct:   12 EPVSSGSSSWVGLKVSEFDETRPSSAKALLLYGSKAQGTFVQDSR-PRGSGAGSAANDYLDSLKASLAGAFLPVGYPHSVSKEYFSYQAWDTVQAMCSYLRGVLATQALLRGVGVGKEGATALAATIIWVLKDGSGMVGGLGFATFCSVGFDVNVKTWRLFADVANNVGLTLDLLAPMAGDYFLLVICVANVFKAMCGVSA 211
[Close]
BLAST of mRNA_D-dudresnayi_contig10350.373.1 vs. uniprot
Match: A0A8J6CEJ6_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CEJ6_DIALT)

HSP 1 Score: 167 bits (424), Expect = 3.090e-45
Identity = 83/148 (56.08%), Postives = 104/148 (70.27%), Query Frame = 1 
Query:  448 LVPRSSWNTAEGLQPTISAFFRRTFLPAGYPSSVRKEYMEYQTWDTVQALCSYLRGVLCLTATLHASGVGDEHASAIAAAMVWVFRDGFGMVGSLLFSYLASSRMDSNIKEWRLFADIANDVGLTLDLIAPIFREHFALVSSLATMCK 891
            L PR S +  E L     + F R FLP G+P SVR EY  YQ +DT+QALCSYLRG+L  TA L ASGVG+E AS +AAA+ WV RDGFGM+GSL+F++   SR D  +KEWRLFAD+ NDVGL+LD++AP+      L++S   MCK
Sbjct:   29 LSPRISASARERLW----SLFARVFLPDGFPHSVRPEYATYQLYDTLQALCSYLRGILTTTAILEASGVGNETASPLAAAVAWVLRDGFGMLGSLIFAFCVGSRFDGGVKEWRLFADLINDVGLSLDMVAPLLPHRVLLLTSCGAMCK 172
[Close]
BLAST of mRNA_D-dudresnayi_contig10350.373.1 vs. uniprot
Match: A0A3R7JV14_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JV14_9STRA)

HSP 1 Score: 169 bits (427), Expect = 3.500e-45
Identity = 92/209 (44.02%), Postives = 125/209 (59.81%), Query Frame = 1 
Query:  298 GAGDMDNRPGEPNGSAVLSPMEVVATEFDSSRPHTRRPNVAYHVVGVDDGLVPRSSWNTAEGLQP-TISAFFRRT---FLPAGYPSSVRKEYMEYQTWDTVQALCSYLRGVLCLTATLHASGVGDEHASAIAAAMVWVFRDGFGMVGSLLFSYLASSRMDSNIKEWRLFADIANDVGLTLDLIAPIFREHFALVSSLATMCKALCGVAA 912
            G   +D+     +G   L P +V  TEFD+       P   Y  +G  D L+P         +   T+S F R     FLPAGYP SV ++Y+ +Q WDT+QA+CSYLRGVL   + L + GVGD+ A+ +AAA+ WV RDG GM+G L F+Y    + D N+K WRLFAD+ NDVGLTLD++AP F      V  ++++CK +CGVAA
Sbjct:   10 GPSPVDSPRASESGKNAL-PNDVRVTEFDTRPVCALEPPRRYVQLG--DQLLPTGHGRARNAVGCLTLSGFSRELQEMFLPAGYPDSVSEDYLAFQFWDTMQAMCSYLRGVLATQSVLQSVGVGDDKATPLAAALQWVLRDGSGMIGGLTFAYFVGPKFDVNVKRWRLFADVINDVGLTLDMVAPYFPTLVTEVLCVSSVCKTMCGVAA 215
[Close]
BLAST of mRNA_D-dudresnayi_contig10350.373.1 vs. uniprot
Match: A0A3F2RWJ4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWJ4_9STRA)

HSP 1 Score: 171 bits (432), Expect = 2.090e-44
Identity = 96/211 (45.50%), Postives = 129/211 (61.14%), Query Frame = 1 
Query:  298 GAGDMDNRPGEPNGSAVLSPMEVVATEFDSSRPHTRRPNVAYHVVGVDDGLVPRS---SWNTAEGLQPTISAFFRRT---FLPAGYPSSVRKEYMEYQTWDTVQALCSYLRGVLCLTATLHASGVGDEHASAIAAAMVWVFRDGFGMVGSLLFSYLASSRMDSNIKEWRLFADIANDVGLTLDLIAPIFREHFALVSSLATMCKALCGVAA 912
            G   +D+     +G   L P +V  TEFD+       P   Y  +G  D L+P     + N A  L  T+S F R     FLPAGYP SV ++Y+ +Q WDT+QA+CSYLRGVL   + L + GVGD+ A+ +AAA+ WV RDG GM+G L F+YL   + D N+K WRLFAD+ NDVGLTLD++AP F      V  ++++CK +CGVAA
Sbjct:   10 GPSPVDSPRASESGKNAL-PNDVRVTEFDTRPVCASEPPRRYVQLG--DQLLPTGHGRARNAAGCL--TLSGFSRELQEMFLPAGYPDSVSEDYLAFQFWDTMQAMCSYLRGVLATQSVLQSVGVGDDKATPLAAALQWVLRDGSGMIGGLTFAYLVGPKFDVNVKRWRLFADVINDVGLTLDMVAPYFPTLVTEVLCVSSVCKTMCGVAA 215
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10350.373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ06_ECTSI4.600e-10380.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2TJN0_9EUKA7.180e-5261.87Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A7R9UTE8_DIALT9.510e-5156.77Hypothetical protein (Fragment) n=1 Tax=Diacronema... [more]
A0A7S2CTD9_9STRA5.970e-4962.88Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
W7U4R7_9STRA1.770e-4865.67Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A662WPM7_9STRA5.380e-4746.70Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A813KE75_POLGL5.240e-4647.26Hypothetical protein n=3 Tax=Polarella glacialis T... [more]
A0A8J6CEJ6_DIALT3.090e-4556.08Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A3R7JV14_9STRA3.500e-4544.02Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A3F2RWJ4_9STRA2.090e-4445.50Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10350contigD-dudresnayi_contig10350:3024..8975 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.2
Seed ortholog evalue9.1e-83
Seed eggNOG ortholog2880.D7FQ06
Preferred nameC16orf58
EggNOG free text desc.response to UV-B
EggNOG OGsKOG4249@1,KOG4249@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size914
Cds size603
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10350.373.1prot_D-dudresnayi_contig10350.373.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10350 3333..8975 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927533.3445907-UTR-D-dudresnayi_contig10350:3023..33321622927533.3445907-UTR-D-dudresnayi_contig10350:3023..3332Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10350 3024..3332 +
1690556796.3644233-UTR-D-dudresnayi_contig10350:3023..33321690556796.3644233-UTR-D-dudresnayi_contig10350:3023..3332Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10350 3024..3332 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927533.3631644-CDS-D-dudresnayi_contig10350:3332..35351622927533.3631644-CDS-D-dudresnayi_contig10350:3332..3535Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10350 3333..3535 +
1690556796.3765755-CDS-D-dudresnayi_contig10350:3332..35351690556796.3765755-CDS-D-dudresnayi_contig10350:3332..3535Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10350 3333..3535 +
1622927533.3849907-CDS-D-dudresnayi_contig10350:4300..43791622927533.3849907-CDS-D-dudresnayi_contig10350:4300..4379Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10350 4301..4379 +
1690556796.3897653-CDS-D-dudresnayi_contig10350:4300..43791690556796.3897653-CDS-D-dudresnayi_contig10350:4300..4379Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10350 4301..4379 +
1622927533.4022737-CDS-D-dudresnayi_contig10350:5464..55341622927533.4022737-CDS-D-dudresnayi_contig10350:5464..5534Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10350 5465..5534 +
1690556796.408476-CDS-D-dudresnayi_contig10350:5464..55341690556796.408476-CDS-D-dudresnayi_contig10350:5464..5534Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10350 5465..5534 +
1622927533.4202714-CDS-D-dudresnayi_contig10350:6993..72231622927533.4202714-CDS-D-dudresnayi_contig10350:6993..7223Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10350 6994..7223 +
1690556796.4206665-CDS-D-dudresnayi_contig10350:6993..72231690556796.4206665-CDS-D-dudresnayi_contig10350:6993..7223Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10350 6994..7223 +
1622927533.4350376-CDS-D-dudresnayi_contig10350:8954..89751622927533.4350376-CDS-D-dudresnayi_contig10350:8954..8975Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10350 8955..8975 +
1690556796.4306302-CDS-D-dudresnayi_contig10350:8954..89751690556796.4306302-CDS-D-dudresnayi_contig10350:8954..8975Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10350 8955..8975 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10350.373.1

>prot_D-dudresnayi_contig10350.373.1 ID=prot_D-dudresnayi_contig10350.373.1|Name=mRNA_D-dudresnayi_contig10350.373.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=201bp
MDNRPGEPNGSAVLSPMEVVATEFDSSRPHTRRPNVAYHVVGVDDGLVPR
SSWNTAEGLQPTISAFFRRTFLPAGYPSSVRKEYMEYQTWDTVQALCSYL
RGVLCLTATLHASGVGDEHASAIAAAMVWVFRDGFGMVGSLLFSYLASSR
MDSNIKEWRLFADIANDVGLTLDLIAPIFREHFALVSSLATMCKALCGVA
A
back to top

mRNA from alignment at D-dudresnayi_contig10350:3024..8975+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10350.373.1 ID=mRNA_D-dudresnayi_contig10350.373.1|Name=mRNA_D-dudresnayi_contig10350.373.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=5952bp|location=Sequence derived from alignment at D-dudresnayi_contig10350:3024..8975+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCCAGAAGCCAGGGCTACGAATGCCATATTCTCTTAATACCGTTGCTTGC
TACTGTCTTGGGTGGATAGCTAGAATAGTCCAACGGAAGGGGGGAGCATA
GGAAATTGGCTGTAAATTGTGCAGGTTGCCCCATCGTGCGCTGTTGTTCT
TCTCTCTGTGTGCTGCATGTTGCACCAAACGTCAACTCCAGGTAGTGCAT
GTTCCACAACCAAACGTTGAGTGCGGAGTTTAACACAACAACACATTAAG
GGCAGGAAGTCGCCTGTCCCGCCACTACGTTGTTGGGAGCCTGCCGTGGT
GCTGGTGACATGGACAACCGTCCAGGAGAACCTAATGGGAGCGCTGTGCT
GAGCCCAATGGAGGTGGTTGCGACAGAGTTCGACTCTTCGAGGCCCCATA
CGCGTCGTCCTAACGTGGCCTATCACGTCGTTGGGGTCGATGATGGGCTG
GTGCCGCGCAGCAGTTGGAACACGGCTGAAGGGCTTCAGCCGACTATTTC
TGCCTTCTTCAGGTTGGTTCAGGCGTCGGGTTGGTGTGTTGTTGGTGTGT
TTTCTTTGGAAGGTGTGCAGTATGCATGCTTCCACAACATGACACTGACA
TGTTGCCGCAGGGGTTTACTACTATTGTGCTCCCGATACTACTGTCGGGC
CTTCAGAGCCCTGGCAGTTGGTGATATTTCATTAGCCGTACACAGATCTA
TGACTCTTTTGTGTGTATCGTACATCAAAATGTTGAGGCTATTGTGGTCA
CGATATGAAGCCTATTGTTTCGCAACGAAAGCTATCTATCCTTTTGCCAA
CCTATCGCTAGGGCAATAGTCTACCCTTTTGAATAGCTTTCGTCCAGGGT
GTAATACACACCCGGTATCATACCTGGTATAGTCTATGCATCTACGAAAA
ATGTTGGCAGGCAAGCCGTACCTTCGTTTATCTACAGTTTGTGCGCTTCG
ATGGTGTAAATGAGGTACACTGTTGTTCGAGTACAGCATCAACGGGACGA
AGCTATGGCCTTCAATTGAGTTAGGCGACGCCCTTGCAGCAATCCTGCAC
AGCAGACACCTACCGCACTCCGCCGTTCACACTTAGGTCAGGAGCGCCCC
TTTTGCAGAACCCCCTCAAGGCAGCAGTAGATACACAAGAAGCAAAAATC
GAAAACGGCGCACCAATACACACCCAGAGTCAAAGTATGTGTCCCGCTAC
AGGTACTGTACGGTAAAGCACACGGAACCCCCGAACTCCCATGCGTGTGC
TTTCGTGATGTCGCGGTGCTGTTTCAGACGTACGTTTCTACCCGCCGGCT
ACCCGTCCTCCGTGCGGAAGGAGTACATGGAGTACCAGACTTGGGACACA
GTTCAGGTATATGCGGCAACTACTCTTAACTACATTGATATACGTAGTGC
AACGAGCAAGCGATGCGCATGCGCGTCTTGTTGCGTAATGATAAAAAAGT
GGCACTCGTGTTTTGTACAAGCACGTCGCCAGGGGGGGCGAGGGGGTAGT
GTGCAGATTACATTGTTTCAGCAGTATGCCGAGGTGTGTGGAGCGCCGGA
TCTGTTAAATGAATCGAGAACAGCGTCGTCGCATGTTTTGATGAAACGGT
AGTCAGGCGTGCATATGCGTTGCAAAATTCGTGAACATGCATGTACTGCG
CTCTCGAAACAAATAATGTGCGTGCAGTGAGTGTGTAAGCACCAGGAGTA
TGTTTTTGGGTCAGAGTCCGTTTTTTGTTTTTTGGGTTTCGAAAGACGGC
GTGTTTGACGGGAGGGGAGGAGGGGGGGGGGGGGGATACGCATGGATGTA
TTGTGCTGTTGACGTGGCACTACTTATTTTTTGTTACGGTTGTCTTTGCG
TTTCGTCGAGCACTGCGCAGGATGCTTTTGACGCCGCCATAGATATTTTG
AAGACACACCAGTGTCAATTTTGCTCGTGTTGTTTTTTGCATCAAGTGCT
GTTATCTCCGCCCTATTCTTCTCCAGCTCCATCTCTCTTTGTAACTCAGA
TCCGGAGTCACATAGCAGGCGCTCTTCCCCCCTCCCCACTACGGGGTGCC
TCCATTTTTATCACGAGAAGGGTGCAGCACTTTCTTCCCTCGCCATATTT
CATCGAATTGTGCATACACACGCTAGCTTTCTGCAGTCGATTTGTTGCAC
AAGAGGAAGTCCTTCAGGGGGGGGCTCGAACTCACGACCTCGACCGTAGT
AGATTTAAGCTAATCTACGACTAGACCACGGGGGTGCCGTGTTGCACCCG
TCAATACTATCTACAGTAATAATATTGTGCTTGTTCGTGTTAAGTGTTTG
TCATAGTCGCGAGCTTTTACTCGTGCCCAAGGGCGTCTTTTCTCTGTTCT
TGCCCCGAATCAGGTTGCGCGGTGATAGCCCCTCTTTTAAAACCTCCTTC
TCGCGCCCCTCGTGTGTCTTCGTTTATCCTCCCATTGGCAGGCTCTCTGC
AGCTATCTTCGAGGCGTGCTGTGCCTCACTGCCACGCTTCACGCCTCGGG
CGTAGGGGATGGTAAGCTGAGAACGTACGAGCAATACTTTCGTGACTTGA
AAAAAAAAGGTACATACATACACCGAAATCACAGGTACACCGCCCAGCAA
ACCAAGTTGTGTTTACAGGTAGCGCAGCACAAGTATCATAGCAGTGACGC
ACCAAAAACATACCAGTGGCCGACAGGCAAGCCCCTCCATGTGTGCGTGC
GTGCGTGTGTGTGTGTGTGTGTGTTTTAATATATATCATGATAGAATATA
CGCAACCGAAGAAGATTAACGAGCCGCTTTAATTTTGGTATAATAGCTCG
GATCTTTGGGATGCGCGTTTTATTTATACTATTATTAATAGTAACAACGC
GAGCTGTTCAGCAGTTCGGAAAATTCTATCTACTAACCCTAACCCGAACC
CTAACGACCACACTGTAGTCTAATGATATAGAGTCAAAACCTCTCTAACG
ATCCGAGCTACCAACCATAGTGGTAAACCTACTGAGTTTTTATCGCACAG
TCAGTATAATAGCGAAGTTGCCGATTATGACACCCTGGGTTCCCTGAACC
AGTTTGGAACGTCACGGCTTATGTATATTTTTTGTAAATTGCACAATCTT
GTGATTGTGTTGGTGGTAGCAAGCTATAAGCTATCCCATTGCAAGGCTTT
CTCGGTCCCCCGTCTATCGCTATTGCTGTCGGTGTCTTTGCCTCTCTTTC
CCGCCGGCCACGAGTGAGTGTCGTTGTTGTGTGTATCGATTCTCGCCAAC
TCATTGTGTCGTACCAGGTGACTACCCTGATTATTCCCTTATAGCATCGG
GACACCCGGGCGGTCTACACAAACGTACAGTAGTAGTAGTAGTAGTAGTA
CAGTACCGCGGCGACAGGGTATGAGTGTTTATTTGCAAGCTAATAATCTA
GTAATGATAGCCACTGACTGATGCATATCAGTCAGTGCTGACTGCGGCAG
TCCTTACACGTTTGTTCGACAGGATCTTTATCGATAGTGTGTTTACTCCC
TGTTATTATAGTGTGGTCGTTAGCGTTAGGTTAGGTTTAGCTATATCAAA
TTGCCGGACTGCTGAACTGCCCACGTTGTTGGTACTATAATATTAGTGTA
ATAATACACACATCCTAAAATACCCATCCTGTTGAACAAGGTGTGTAAAT
GAGGCTCACTGAACCGATTAATAGCCTGGTGGTTGTGGTGTTTTACTCAG
ATTCTCTTGTACCAGGTGTGTGGCCTGTTTCAAGCTTTGTTGAGATAGCG
CAGTATCTGACATCGACACCGTCCCCCCGCCCACCCAATGTAAGATATGG
AAAAAAACGTAAAGAGCGCCCAAATAATGGAGGTGTCTCTACTGGGAGTA
GGAACGGTGCTTCGTCTCGAAAGGGATGCGTGGTCAATGGTAAAATCACT
AAGGCAAGCAACAGATGAGTACCACCGCCGCCCCTCCTCCTCCTCCTATC
CCCCTATTCCCCCACCTCAGAACACGCCTCCGCGATCGCAGCGGCCATGG
TGTGGGTCTTCCGCGATGGCTTCGGAATGGTCGGCAGCCTTCTGTTTTCC
TACCTAGCGTCCTCACGTATGGACAGCAACATCAAGGAGTGGAGGCTGTT
TGCCGACATCGCCAACGATGTGGGGCTAACGCTTGACCTCATCGCTCCCA
TATTCCGGGAACATTTTGCGCTCGTGTCTTCCTTGGCCACCATGTGCAAG
GCAAGGGGTGGATTGTGGTGTGGTCGGGTGGGGTGGGGTGGGGTGGGTGG
GACGTACTCATTTGTTGCGTGCCTTAGTCACGCATCCCTTTCGAGACGGA
GCACGGTTCCTACTCCTAATAGAGACACCTCCAACAGTTGGGCGCTCTTT
TACGTTTTTTGCCATATCGTATATAAAACCACTTTTTGCTCATCTTATCC
CCTTCCTGTTTCGCCTTTTGTGGCGATCATCCATCTGCTAGGATAACAAT
CGTTTTCTGGGTATTAGCTAGTGTATCAAAACTCTCCATGTCACACTCGT
CTATTTTTCTCATCTCCTCTTCCAACACATCCTGTTCCTCATTGTACAGT
CCATAATATCCCACTATGTGAGTTCTCCTCTCTTCAGCCTTGCCACAGGG
GCACATCTGTTCATCTTGTCCCTCCGGCTCCCGAGTACTGGTGTACATCT
TTATTCTTTCTGGCAAAGTCCAGGTCCCCTACACGAAATTACAGTTTCAG
CATTTTCGCGTAGTCCATTGGGACGTGTAATTACGTTTTCATTCCTACCT
CTTCTCTTAATCTCCCGTATACCTATAAATGTTCTTCCCCTTCCATCTTG
TTTTTAACACTCATCTTTCCCTTATTTATATCCTTTCTTACGTCTGCCTT
GTACTCCCCAAACTTGGCTATGGACAACATAGCTTCTTGGTTTCCTCCTA
TTTCGTTCCATACTTTCTCGATTACATTATCCCACCTTATTCCAGATCGA
CCGTTTGTTACTTTCTCCCATACAACCCTGTCGATTATGGCTGGAAGCCT
CTTTTCTGGCATGCTCCTTGTCGACTATGGCTGGAAGCTTCTTTTGTGGC
ATGCTCCTTGCTTTATATTGCCATTCAACTTTCTCCCGTCTCTATTTTTT
TAAGCGGGTACATTCCCAGTTGCTGCTCTTAAAAATACTGTATTGTTCGT
CGTACATTGGCATCCTAGAACGTTTTTTAGCTGCTGTCATCTGTACTGTT
TCCAGCTGTTTTATGAACTTCGCGTTTCCTTCTCACACTTCTCCAGCACA
TATTTTAGCTTTGGTACGATCACATTCATCATCACAATACATGTTTTAAT
CCCAGTGTCAAGGTGCGAGTCTGTTAACATCGCGTCCATCTTGACTACGT
GTGCTTCACCCTTTCCCCGTTACTTTTATACTATTTGTTCATCCCAAGAG
CAGTATTTTGAGACCTCTACGCCAAGATACGTATATCGGTCTACGATCGG
AAGCTTATCTTCTCCCTCGCTTCAAATTGAATGTTGCGGGGTTGTTCTTA
TATAAGATATTAATATGCGTTTGGCGTTTGGGGGTTTAAGACAGTAAAGA
GGAGAAGGAAAATCAGCAGGACGAGCAACGATCTAAGCTGGCAGCTGTCG
ATTGATTTGAAGATCTTCCACTTTTTGATGATGTGCAAGAAAACAAAAAT
CAGAAAATCGGAGGAGTCGGGACGCACCACTGATATGCGTCAAAGGTCAT
CGGGGGATCGCACGGCGGAGCAGCACCGACCTTGTCCCCCCCGCGCTCGC
TATCTCTCGCTTTTAGTGGTCTTGCCGGTCGACTTTGCTTCCCCACAGCG
ATTTTGACTCTGATTTATTCTGTTGTTCCTACTGATGGTGTGATCCATGA
TTTGCTCATCATGGAAGCATGCCGCGTACCCTCTGTTTTTTTGTTTTGTT
GTTGGTTTGTTGGTTTTTTCGTGCGTGGCAGGCGCTATGCGGGGTGGCGG
CG
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig10350:3024..8975+

>mRNA_D-dudresnayi_contig10350.373.1 ID=mRNA_D-dudresnayi_contig10350.373.1|Name=mRNA_D-dudresnayi_contig10350.373.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1206bp|location=Sequence derived from alignment at D-dudresnayi_contig10350:3024..8975+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGACAACCGTCCAGGAGAACCTAATGGGAGCGCTGTGCTGAGCCCAAT
GGAGGTGGTTGCGACAGAGTTCGACTCTTCGAGGCCCCATACGCGTCGTC
CTAACGTGGCCTATCACGTCGTTGGGGTCGATGATGGGCTGGTGCCGCGC
AGCAGTTGGAACACGGCTGAAGGGCTTCAGCCGACTATTTCTGCCTTCTT
CAGATGGACAACCGTCCAGGAGAACCTAATGGGAGCGCTGTGCTGAGCCC
AATGGAGGTGGTTGCGACAGAGTTCGACTCTTCGAGGCCCCATACGCGTC
GTCCTAACGTGGCCTATCACGTCGTTGGGGTCGATGATGGGCTGGTGCCG
CGCAGCAGTTGGAACACGGCTGAAGGGCTTCAGCCGACTATTTCTGCCTT
CTTCAGACGTACGTTTCTACCCGCCGGCTACCCGTCCTCCGTGCGGAAGG
AGTACATGGAGTACCAGACTTGGGACACAGTTCAGACGTACGTTTCTACC
CGCCGGCTACCCGTCCTCCGTGCGGAAGGAGTACATGGAGTACCAGACTT
GGGACACAGTTCAGGCTCTCTGCAGCTATCTTCGAGGCGTGCTGTGCCTC
ACTGCCACGCTTCACGCCTCGGGCGTAGGGGATGGCTCTCTGCAGCTATC
TTCGAGGCGTGCTGTGCCTCACTGCCACGCTTCACGCCTCGGGCGTAGGG
GATGAACACGCCTCCGCGATCGCAGCGGCCATGGTGTGGGTCTTCCGCGA
TGGCTTCGGAATGGTCGGCAGCCTTCTGTTTTCCTACCTAGCGTCCTCAC
GTATGGACAGCAACATCAAGGAGTGGAGGCTGTTTGCCGACATCGCCAAC
GATGTGGGGCTAACGCTTGACCTCATCGCTCCCATATTCCGGGAACATTT
TGCGCTCGTGTCTTCCTTGGCCACCATGTGCAAGAACACGCCTCCGCGAT
CGCAGCGGCCATGGTGTGGGTCTTCCGCGATGGCTTCGGAATGGTCGGCA
GCCTTCTGTTTTCCTACCTAGCGTCCTCACGTATGGACAGCAACATCAAG
GAGTGGAGGCTGTTTGCCGACATCGCCAACGATGTGGGGCTAACGCTTGA
CCTCATCGCTCCCATATTCCGGGAACATTTTGCGCTCGTGTCTTCCTTGG
CCACCATGTGCAAGGCGCTATGCGGGGTGGCGGCGGCGCTATGCGGGGTG
GCGGCG
back to top