mRNA_D-dudresnayi_contig1035.372.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig1035.372.1
Unique NamemRNA_D-dudresnayi_contig1035.372.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig1035.372.1 vs. uniprot
Match: B1N8E9_9PHAE (Glutathione S-transferase 4 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E9_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 3.810e-69
Identity = 122/216 (56.48%), Postives = 152/216 (70.37%), Query Frame = 2 
Query:  101 MAIILNYFDLPGRGEPTRVALSIAGVDYVDKRLSFEEYGASSFKHLPVLEMDGAEYTQSTALLRYAGKLGGLYPADPLVAMKVDEIVMAAEDVNITLFSTMAIKDPQEQASDSCCIHTSFKFTLLKTRKELSAGKLKTMLEGLAAKLAANPSSPYFVGDSLTIADLQVQSIVLNVELGLLEGFPPSLVSDVAPTIKAHYDAVMKHPKVKAYYASKA 748
            M  + NYF +P RGE TRVAL++AGVDY DKR+SFEE+GA  FK LPV +MDG +YTQSTALLRYAGKLGG YP  PL ++KVDEIVM AEDV I LFSTM  KD  ++               L+  + L AGK+K +LE +A K+ AN  S + VG SLTIAD+QV +++  V+ G L G P ++V D+ P++KA   AVM+HPKVKAYYASKA
Sbjct:    1 MPAVFNYFGIPARGEATRVALAVAGVDYEDKRMSFEEFGACEFKTLPVYQMDGTDYTQSTALLRYAGKLGGQYPECPLASLKVDEIVMIAEDVFINLFSTMGEKDEAKK---------------LEKCQTLMAGKIKDLLEDIARKVEANKCSTFCVGASLTIADIQVHAVIATVQAGFLTGIPTTMVEDICPSLKALDHAVMEHPKVKAYYASKA 201
[Close]
BLAST of mRNA_D-dudresnayi_contig1035.372.1 vs. uniprot
Match: D7G537_ECTSI (Glutathione S-transferase n=4 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G537_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 5.350e-62
Identity = 119/214 (55.61%), Postives = 142/214 (66.36%), Query Frame = 2 
Query:  113 LNYFDLPGRGEPTRVALSIAGVDYVDKRLSFEEYGASSF--KHLPVLEMDGAEYTQSTALLRYAGKLGGLYPADPLVAMKVDEIVMAAEDVNITLFSTMAIKDPQEQASDSCCIHTSFKFTLLKTRKELSAGKLKTMLEGLAAKLAANPSSPYFVGDSLTIADLQVQSIVLNVELGLLEGFPPSLVSDVAPTIKAHYDAVMKHPKVKAYYASKA 748
            LNYF LPGRGE TRVAL+ AG D+ D R+ F EYGA  +  K LPVLEMD AEYTQSTALLRYAGKLGGLYP D L A+KVDEIVM AEDV   +F  M  +D                       KE+  GK+KT++  L AKLAANPSS +FVG+S TIADLQV +++ N E   L G P + ++D APT+     A+++ PKVKAYYASKA
Sbjct:    7 LNYFGLPGRGEATRVALAYAGKDFEDNRMGFPEYGACKWAGKGLPVLEMDDAEYTQSTALLRYAGKLGGLYPDDALAALKVDEIVMIAEDVMANMFKCMGQEDDT-------------------VAKEVLEGKIKTLVGMLVAKLAANPSSKFFVGNSPTIADLQVHAVIKNFEANFLTGLPTTHIADTAPTLMEMQAALLEDPKVKAYYASKA 201
[Close]
BLAST of mRNA_D-dudresnayi_contig1035.372.1 vs. uniprot
Match: D7G5G1_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G1_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 1.140e-46
Identity = 103/207 (49.76%), Postives = 127/207 (61.35%), Query Frame = 2 
Query:  113 LNYFDLPGRGEPTRVALSIAGVDYVDKRLSFEEYGASSFKH--LPVLEMDGAEYTQSTALLRYAGKLGGLYPADPLVAMKVDEIVMAAEDVNITLFSTMAIKDPQEQASDSCCIHTSFKFTLLKTRKELSAGKLKTMLEGLAAKLAANPSSPYFVGDSLTIADLQ--VQSIVLNVELGLLEGFPPSLVSDVAPTIKAHYDAVMKHPK 721
            L+YFD PGR E TRVAL+ AG D+ D  + F EYGAS +    LPVLEMD AEYTQSTALLRYAGKLGGLYP D L A+KVDEIVM AEDV   +F  +  KD                         L  GK+KT++E L ++LAAN SS +FVG   TIADLQ  V +++ N E   L G P + ++D APT+     A+++ PK
Sbjct:    7 LHYFDDPGRAEATRVALAYAGKDFEDNIMGFPEYGASKWAGIGLPVLEMDDAEYTQSTALLRYAGKLGGLYPDDALAALKVDEIVMIAEDVMANMFKCVDQKDDT-------------------MANGLLEGKIKTLVEMLTSRLAANASSKFFVGHPPTIADLQARVHAVIKNFEANFLTGLPTTHIADTAPTLMEMQAALLEDPK 194
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BLAST of mRNA_D-dudresnayi_contig1035.372.1 vs. uniprot
Match: A0A6H5JNS9_9PHAE (GST C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS9_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 6.160e-45
Identity = 99/202 (49.01%), Postives = 126/202 (62.38%), Query Frame = 2 
Query:  131 PGRGEPTRVALSIAGVDYVDKRLSFEEYGASSF--KHLPVLEMDGAEYTQSTALLRYAGKLGGLYPADPLVAMKVDEIVMAAEDVNITLFSTMAIKDPQEQASDSCCIHTSFKFTLLKTRKELSAGKLKTMLEGLAAKLAANPSSPYFVGDSLTIADLQVQSIVLNVELGLLEGFPPSLVSDVAPTIKAHYDAVMKHPKVKA 730
            PGRGE T VAL+  G D+VD  + F E+GA  +  K LPVLEMD AEY QSTALLRYAGK+GGLYP D L A++VDEIVM AEDV   +F  M       Q  D+               K +  GK+KT++E L AKLA N SS +FVG+S TIA+LQV +++ N E   L   P +L++D APT+     A+++ PK KA
Sbjct:   55 PGRGEATGVALAYGGKDFVDNTMGFSEHGACKWAGKGLPVLEMDDAEYFQSTALLRYAGKMGGLYPDDALAALEVDEIVMIAEDVLTNMFKCMG------QTDDTVA-------------KGVLEGKIKTLVEMLVAKLATNQSSKFFVGNSPTIANLQVHAVIKNFEANFLTDLPTTLIADTAPTVMEMEVALLQDPKEKA 237
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BLAST of mRNA_D-dudresnayi_contig1035.372.1 vs. uniprot
Match: D7G5G0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G0_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 6.830e-44
Identity = 93/165 (56.36%), Postives = 110/165 (66.67%), Query Frame = 2 
Query:  113 LNYFDLPGRGEPTRVALSIAGVDYVDKRLSFEEYGASSF--KHLPVLEMDGAEYTQSTALLRYAGKLGGLYPADPLVAMKVDEIVMAAEDVNITLFSTMAIKDPQEQASDSCCIHTSFKFTLLKTRKELSAGKLKTMLEGLAAKLAANPSSPYFVGDSLTIADLQ 601
            LNYF+LPGR E TRVAL+ AG ++ DKRL+F EYGA  +  K LPVL+MDGAEYTQSTALLRYAGKLGGLYP D L A+KVDEIVM  ED+   +F  M  +D                       K +  GK+K ++E L +KLAANPSS +FVG S TIADLQ
Sbjct:    7 LNYFELPGRAEATRVALAYAGKEFDDKRLTFPEYGACKWAGKGLPVLQMDGAEYTQSTALLRYAGKLGGLYPDDALAALKVDEIVMIGEDILANMFKCMGAEDDT-------------------VAKGVLEGKVKGLVELLVSKLAANPSSKFFVGTSPTIADLQ 152
[Close]
BLAST of mRNA_D-dudresnayi_contig1035.372.1 vs. uniprot
Match: D8VMN8_9ZZZZ (Glutathione S-transferase n=1 Tax=uncultured organism TaxID=155900 RepID=D8VMN8_9ZZZZ)

HSP 1 Score: 141 bits (355), Expect = 8.260e-35
Identity = 87/214 (40.65%), Postives = 117/214 (54.67%), Query Frame = 2 
Query:  113 LNYFDLPG-RGEPTRVALSIAGVDYVDKRLSFEEYG----ASSFKHLPVLEMDGAEYTQSTALLRYAGKLGGLYPADPLVAMKVDEIVMAAEDVNITLFSTMAIKDPQEQASDSCCIHTSFKFTLLKTRKELSAGKLKTMLEGLAAKLAANPSSPYFVGDSLTIADLQVQSIVLNVELGLLEGFPPSLVSDVAPTIKAHYDAVMKHPKVKAYYA 739
            L+YFD+ G RGEP R+AL+I GV + D R SF E+     A+ F  +PVLE++G   TQS A+LRYAG+L GLYPAD   A+  DE+    E+ N+ L  T  +KD + +A+                R  L +G + T L  L  +L       YF  + LT+ADL+V   V  +  G L+  P  LV  VAP + AH   V +HP V AYYA
Sbjct:    6 LSYFDMHGGRGEPVRLALAIGGVAFEDHRFSFPEFAEVRKAAPFGQVPVLEVNGVTITQSDAMLRYAGQLAGLYPADAYQALLCDEVSYVVEEANVKLGPTFRMKDEELKAA----------------RLALVSGSITTYLGWLQKRLVEQ-GGEYFADNRLTVADLKVFVDVRGLNSGRLDHVPTDLVEQVAPALNAHMQRVSQHPAVVAYYA 202
[Close]
BLAST of mRNA_D-dudresnayi_contig1035.372.1 vs. uniprot
Match: A0A848U2W4_9GAMM (Glutathione S-transferase n=1 Tax=Granulosicoccus sp. TaxID=1943584 RepID=A0A848U2W4_9GAMM)

HSP 1 Score: 137 bits (346), Expect = 1.350e-33
Identity = 83/217 (38.25%), Postives = 119/217 (54.84%), Query Frame = 2 
Query:  113 LNYFDLPG-RGEPTRVALSIAGVDYVDKRLSFEEYGASS----FKHLPVLEMDGAEYTQSTALLRYAGKLGGLYPADPLVAMKVDEIVMAAEDVNITLFSTMAIKDPQEQASDSCCIHTSFKFTLLKTRKELSAGKLKTMLEGLAAKLAANPSSPYFVGDSLTIADLQVQSIVLNVELGLLEGFPPSLVSDVAPTIKAHYDAVMKHPKVKAYYASKA 748
            L YFD+ G RGEP R+A   AG+ + D RLSF ++G       F  +PVLE+DGA +TQS A+ RY GK  GLYPAD L AM  DE++ A ED++  +  T  ++                   L + RK L  G+L   L+G   +L       YF G++L+IAD+++      +  G L+  P  LV +VAPT+ AH   +   P+++AYY S+A
Sbjct:    6 LTYFDVDGGRGEPIRIAFHAAGIAFEDNRLSFADFGNQRVNFRFNAVPVLEIDGAAFTQSNAISRYVGKQAGLYPADDLQAMYCDEVLGALEDLSHYVVQTFGLEGE----------------ALKQARKTLVEGRLTVFLKGFD-QLLTRGGGQYFAGNTLSIADIKMFVQTRGLCSGRLDHIPTDLVDNVAPTLIAHQQEIAADPRIQAYYDSRA 205
[Close]
BLAST of mRNA_D-dudresnayi_contig1035.372.1 vs. uniprot
Match: A0A523PBZ5_9PROT (Glutathione S-transferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PBZ5_9PROT)

HSP 1 Score: 135 bits (341), Expect = 6.520e-33
Identity = 83/216 (38.43%), Postives = 117/216 (54.17%), Query Frame = 2 
Query:  113 LNYFDLPG-RGEPTRVALSIAGVDYVDKRLSFEEYG----ASSFKHLPVLEMDGAEYTQSTALLRYAGKLGGLYPADPLVAMKVDEIVMAAEDVNITLFSTMAIKDPQEQASDSCCIHTSFKFTLLKTRKELSAGKLKTMLEGLAAKLAANPSSPYFVGDSLTIADLQVQSIVLNVELGLLEGFPPSLVSDVAPTIKAHYDAVMKHPKVKAYYASK 745
            L YFD  G R EP R+A   AG+D+ D R+SF E+G    ++ F  +PVLE+DGAE TQS AL RY GK+ GLYP D L A+  DE++ A ED++  +  T  ++D +                L   R++L  G L   L GL  KL A     YF  + LT+ADL+      ++  G L+  P  LV  +AP +  H + +   P+V AYYA++
Sbjct:    6 LTYFDFDGGRAEPIRIAFHAAGIDFEDNRISFPEFGEMRQSTRFNSVPVLEIDGAEVTQSNALSRYVGKMAGLYPEDDLQALYCDEVLGALEDLSHYIVQTFGLQDEE----------------LRLAREKLVDGWLSVYLRGLD-KLLARGGGEYFADNGLTVADLKSFVQTRSLRSGNLDYVPKDLVQRLAPGLVEHQERIESDPRVVAYYATR 204
[Close]
BLAST of mRNA_D-dudresnayi_contig1035.372.1 vs. uniprot
Match: A0A2G2IU36_9GAMM (Glutathione S-transferase n=1 Tax=Moritella sp. TaxID=78556 RepID=A0A2G2IU36_9GAMM)

HSP 1 Score: 134 bits (336), Expect = 3.150e-32
Identity = 80/217 (36.87%), Postives = 120/217 (55.30%), Query Frame = 2 
Query:  113 LNYFDLPG-RGEPTRVALSIAGVDYVDKRLSFEEYGA----SSFKHLPVLEMDGAEYTQSTALLRYAGKLGGLYPADPLVAMKVDEIVMAAEDVNITLFSTMAIKDPQEQASDSCCIHTSFKFTLLKTRKELSAGKLKTMLEGLAAKLAANPSSPYFVGDSLTIADLQVQSIVLNVELGLLEGFPPSLVSDVAPTIKAHYDAVMKHPKVKAYYASKA 748
            L YFD+ G R EP R+A   AG+++ DKR+SF E+G     + F  +PVL++DGA+ TQS A+ RY GK+GGLYPAD L A+  DE++ A ED++  +  T  ++  +                L   R++L  G L   L GL  KL       YF  + LT+ADL+V     ++  G L+  P  +V  +AP++  H   +   P+V AYYA+++
Sbjct:    6 LTYFDIDGGRAEPLRIAFHTAGINFEDKRISFPEFGEMRSDTRFNSVPVLDIDGAQITQSNAISRYVGKMGGLYPADDLQALYCDEVLDALEDISHYIVQTFGLQGEE----------------LKLAREKLVDGWLSIYLRGLD-KLLTRGGGKYFADNQLTVADLKVFVQTRSLCAGNLDYVPTDIVQRMAPSLVEHQKRISADPRVVAYYATRS 205
[Close]
BLAST of mRNA_D-dudresnayi_contig1035.372.1 vs. uniprot
Match: A0A7Y3ADL8_9DELT (Glutathione S-transferase n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7Y3ADL8_9DELT)

HSP 1 Score: 134 bits (336), Expect = 3.240e-32
Identity = 78/217 (35.94%), Postives = 122/217 (56.22%), Query Frame = 2 
Query:  113 LNYFDLPG-RGEPTRVALSIAGVDYVDKRLSFEEYG----ASSFKHLPVLEMDGAEYTQSTALLRYAGKLGGLYPADPLVAMKVDEIVMAAEDVNITLFSTMAIKDPQEQASDSCCIHTSFKFTLLKTRKELSAGKLKTMLEGLAAKLAANPSSPYFVGDSLTIADLQVQSIVLNVELGLLEGFPPSLVSDVAPTIKAHYDAVMKHPKVKAYYASKA 748
            L YFD+ G R EP R+A   AG+D+ D R+SF E+G     + F  +PVLE+DGA+ +QS AL RY GK+ GLYPA+ L A+  DE++ A ED++  +  T  + + + Q +                R++L  G L T L+GL  +L       YF  + LT+ADL+    + ++  G+L+  P  +V  VAP +  H + +   P+V+AYY +++
Sbjct:    6 LTYFDIDGGRAEPIRIAFHTAGIDFEDNRISFAEFGEMRSGTPFNSVPVLEIDGAQISQSNALSRYIGKMAGLYPANDLQALYCDEVLGALEDLSHHIVRTFGLPEEELQLA----------------REKLVDGWLSTYLKGLD-QLLIRGGGEYFADNQLTVADLRAFVQMRSLSDGILDYVPTDIVQQVAPGLFDHQERISAEPRVRAYYTTRS 205
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1035.372.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B1N8E9_9PHAE3.810e-6956.48Glutathione S-transferase 4 n=1 Tax=Laminaria digi... [more]
D7G537_ECTSI5.350e-6255.61Glutathione S-transferase n=4 Tax=Ectocarpus silic... [more]
D7G5G1_ECTSI1.140e-4649.76Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
A0A6H5JNS9_9PHAE6.160e-4549.01GST C-terminal domain-containing protein n=1 Tax=E... [more]
D7G5G0_ECTSI6.830e-4456.36Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
D8VMN8_9ZZZZ8.260e-3540.65Glutathione S-transferase n=1 Tax=uncultured organ... [more]
A0A848U2W4_9GAMM1.350e-3338.25Glutathione S-transferase n=1 Tax=Granulosicoccus ... [more]
A0A523PBZ5_9PROT6.520e-3338.43Glutathione S-transferase n=1 Tax=Proteobacteria b... [more]
A0A2G2IU36_9GAMM3.150e-3236.87Glutathione S-transferase n=1 Tax=Moritella sp. Ta... [more]
A0A7Y3ADL8_9DELT3.240e-3235.94Glutathione S-transferase n=1 Tax=Desulfobacterale... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig1035contigD-dudresnayi_contig1035:21276..28241 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score134.8
Seed ortholog evalue4.8e-29
Seed eggNOG ortholog1117647.M5M_17045
Preferred nameyfcF
KEGG rclassRC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418
EggNOG free text desc.Glutathione S-transferase, C-terminal domain
EggNOG OGs1QEZP@1224,1S3EZ@1236,COG0625@1,COG0625@2
EC2.5.1.18
COG Functional cat.O
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000
Hectar predicted targeting categoryother localisation
Exons7
Model size2051
Cds size651
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927533.1713676-UTR-D-dudresnayi_contig1035:21275..213621622927533.1713676-UTR-D-dudresnayi_contig1035:21275..21362Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1035 21276..21362 +
1690556796.2571712-UTR-D-dudresnayi_contig1035:21275..213621690556796.2571712-UTR-D-dudresnayi_contig1035:21275..21362Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1035 21276..21362 +
1622927533.1929889-UTR-D-dudresnayi_contig1035:23824..238371622927533.1929889-UTR-D-dudresnayi_contig1035:23824..23837Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1035 23825..23837 +
1690556796.2774537-UTR-D-dudresnayi_contig1035:23824..238371690556796.2774537-UTR-D-dudresnayi_contig1035:23824..23837Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1035 23825..23837 +
1622927533.296411-UTR-D-dudresnayi_contig1035:26941..282411622927533.296411-UTR-D-dudresnayi_contig1035:26941..28241Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1035 26942..28241 +
1690556796.349224-UTR-D-dudresnayi_contig1035:26941..282411690556796.349224-UTR-D-dudresnayi_contig1035:26941..28241Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1035 26942..28241 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927533.2110007-CDS-D-dudresnayi_contig1035:23837..239871622927533.2110007-CDS-D-dudresnayi_contig1035:23837..23987Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1035 23838..23987 +
1690556796.2865572-CDS-D-dudresnayi_contig1035:23837..239871690556796.2865572-CDS-D-dudresnayi_contig1035:23837..23987Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1035 23838..23987 +
1622927533.227247-CDS-D-dudresnayi_contig1035:24484..245801622927533.227247-CDS-D-dudresnayi_contig1035:24484..24580Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1035 24485..24580 +
1690556796.2936704-CDS-D-dudresnayi_contig1035:24484..245801690556796.2936704-CDS-D-dudresnayi_contig1035:24484..24580Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1035 24485..24580 +
1622927533.2454505-CDS-D-dudresnayi_contig1035:25043..251691622927533.2454505-CDS-D-dudresnayi_contig1035:25043..25169Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1035 25044..25169 +
1690556796.3013825-CDS-D-dudresnayi_contig1035:25043..251691690556796.3013825-CDS-D-dudresnayi_contig1035:25043..25169Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1035 25044..25169 +
1622927533.2602727-CDS-D-dudresnayi_contig1035:25905..260341622927533.2602727-CDS-D-dudresnayi_contig1035:25905..26034Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1035 25906..26034 +
1690556796.3092873-CDS-D-dudresnayi_contig1035:25905..260341690556796.3092873-CDS-D-dudresnayi_contig1035:25905..26034Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1035 25906..26034 +
1622927533.2740533-CDS-D-dudresnayi_contig1035:26546..266661622927533.2740533-CDS-D-dudresnayi_contig1035:26546..26666Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1035 26547..26666 +
1690556796.317834-CDS-D-dudresnayi_contig1035:26546..266661690556796.317834-CDS-D-dudresnayi_contig1035:26546..26666Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1035 26547..26666 +
1622927533.2852852-CDS-D-dudresnayi_contig1035:26911..269411622927533.2852852-CDS-D-dudresnayi_contig1035:26911..26941Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1035 26912..26941 +
1690556796.3311188-CDS-D-dudresnayi_contig1035:26911..269411690556796.3311188-CDS-D-dudresnayi_contig1035:26911..26941Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1035 26912..26941 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig1035.372.1prot_D-dudresnayi_contig1035.372.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig1035 23838..26941 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig1035.372.1

>prot_D-dudresnayi_contig1035.372.1 ID=prot_D-dudresnayi_contig1035.372.1|Name=mRNA_D-dudresnayi_contig1035.372.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=217bp
MAIILNYFDLPGRGEPTRVALSIAGVDYVDKRLSFEEYGASSFKHLPVLE
MDGAEYTQSTALLRYAGKLGGLYPADPLVAMKVDEIVMAAEDVNITLFST
MAIKDPQEQASDSCCIHTSFKFTLLKTRKELSAGKLKTMLEGLAAKLAAN
PSSPYFVGDSLTIADLQVQSIVLNVELGLLEGFPPSLVSDVAPTIKAHYD
AVMKHPKVKAYYASKA*
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mRNA from alignment at D-dudresnayi_contig1035:21276..28241+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig1035.372.1 ID=mRNA_D-dudresnayi_contig1035.372.1|Name=mRNA_D-dudresnayi_contig1035.372.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=6966bp|location=Sequence derived from alignment at D-dudresnayi_contig1035:21276..28241+ (Desmarestia dudresnayi DdudBR16 monoicous)
CTCACAACCTACCAGTGCCACCACCACCACTACCTACCACTCATACCCAT
CTCTACACCCCAGCCTCACAGATCCTATTACCAGCAGGTGCGAATACAGA
GAGCTTGCGAGCTTGCCATGATGTAATAATACACAGTACAACAGTAGTAG
TAGTGTAGCGAGCTGTACGATACACTATCGATACATACATACCCATCATT
ATAGTCACAACAGTAGTCGTAGTACAGTAGTAGTACAATATTGCACCACT
GCTGTTGTTGTACTCGTTGTATTGAGGGGCCGCCCGTGAGTTGTATCATG
CAACGTTGGAACAGCAGGAATGCTACAATAGGTTGTTGGTAGCTTGGGGA
GAGCATGGGATGCATGATAACGTTTGTGCGAGTTATGGCACGAGAAACAC
GCGACACGCTCTGTGCGAAGCAATTGCAACGGTCCACGCTGTCTGTACCA
CCATCAGAGCAGACCATGTATCCAGCACCGCACCGTACGCGACAAAACGT
TCAGCAAGCGCCCGTTTGTTGACGATGCGATGCTGGCGGCCGTCCGTGTG
TTCTTTGTACGCGACTATGGCGACACATATAGGTACAAGAGCTCCGAAAA
CAGAACCAACGGCAGCAGCGTTTCGCTGCGTGTTATACTACTGCTGCGCT
GTCTGTTGTGGTATGAAATAGATTGGGATTGGGTGCCCCTAGAGCTCTAT
GCGTCCTATTATGCTTGTGCATAGCGGCGAAGAGTAGTGCATGTCACGAG
AAGAGGGCCGGGGAAGCCCGAAGTAGCAAGATGGGGACCGGAGAGGGGCA
GTAGTAGCAGTAATAATATTACTGCTGCCGATGAGAGTAAGGAGGAGATG
GCAAACCGGGCAGAATGTTTCAGTGTGACTAACAGCCCCCGTACCTCCCT
CCCGTAGCCCCAAGTATCGTTGACGTTCTGCTCTTCGTTCTGTCTTCGTT
CTGCCTCGTTTGTCCTGTGCGTGTTTTGCTCGCTTCTTTATTTTTTCTTC
CCATCTTTTTTCTTTCTGTTCTTCTCTCTTTTTTATTTTGTTTTATTTAT
TTTTCTTTTTTATATGTTTTTGCGATTTGTTTGGTATGTTAGCCTGTGAC
CGCGGAATTTCGCGTCTTTCTAGGATGGAGGATCCAGTACAGACTCTGAG
TACGCTACTGGATGCCGTAGGGTAGAATGGACGACTTTTAATGTGAAGAC
AACAGCAACAACAACAACACAGTGACAGGGGTGGCGCAGTGGTCTAATGG
TTAGGGTGTTAACTCTGTTGGCGGAAGTTGGTGGTTCGATTCCGGGTGGC
ACTTTTCTGTGCCATCTTCAGTCGCGGAAAACGCGAGAGCATGAGTAAGC
ACAATTCGATGAAAGTCGACGAGGGAAGAAAGTGCTGCACTCTTCTCGCG
ACAAAAATGTAGGCACGTACTGTAGTGGGAAGGAGGGAGGAGCGCCTACT
ATGTGACCCCGGATCTGAGTTACGAAGAGAGATGGAGCTAGAGACGTAAT
AGAGCGAACATAATAAATGGGACGGGAAAAAAATAAAATAAAAAATAGTA
GTAGCTTCGCTGTTGCCACGGCTGGTACACGGTCGCCTGGGTCATGAATA
TGGCATACACACGCACTGTGTATAGCTATCATACGTGAACATAACAAACC
AGAACGTACCCCCGCCTGACATAGCAAAAAAATCCGCATACTGTACTATA
TAGTAACTGCGTGCGACAAACTCATGATACGTTTGTTCGTTTTCGTGCAT
GTTTTACACATTATTATGTTCCATACGCCCTCCGCCTTTCCTCACATGGC
ACACGTAAGTCCTGTTTCGTGAAGGACTTAGTCTACCCCCTGGGCTACCG
TAGTGGTACAACGTCGACCAACCGTCTACCCTGCCAATATAATAATAGTT
ATCTCTTATAACAATATCGAAAAGAAAAACATCAAGGCAGCTCTTATTTG
GTACTCGTATCATACAACAGTAGTAGCAGTGACGAAAAGCACAAAAAAAA
ATGTAGTAATGTTTCTTTGGGATTTTCCCTTCTTGGCACTTACTTTTTTA
CGAGTACGAGTACGAGTATGGAAACAAAATTCTTGTACTGGTACGAGTAC
CATTTTATAGTAATAAGTCCTGCAGTACGAAGGGAACCGCTTTCCACGTT
TGCCTCACTTAGTTAACCGCCGCCTGTTGTGTGACGAAAATATTTTGCTT
CATGATGTTTTCTTTAAGGGGCAAGAACAATCAATCTCAAAGAAAAATGC
ATCAACCATCACTTTTCTTTGGGGGGGGGGGGGGGGGGCGCTTTTCTTTT
CATCGTGCGTTTTCGTATAAAAAGAGGCCTCGTCACGGTGTGGTTGTTGT
TTAGTTTTTTGTGTCTGTCTCTGGTTAAAACCTCAAGTTCTTACTGTTCT
TCTCTTTTCAATAGCATCATGCCTAAAATAATACCGTAGGTACTGACTTT
TACTTCGTCCTTCCCTTATGTGCGTGAACCTATCCTATTGTCGTGTTTGT
ATTTTTGTGTCCGTCGCGTGAAAACCTACACCTTTTGTTATTGTTTTAGC
TCCCGTAACATCATGGCTATCATCCTGAACTACTTCGACCTTCCCGGACG
CGGCGAGCCCACCCGAGTCGCCCTCTCAATTGCCGGAGTTGATTACGTGG
ACAAGCGTTTGTCGTTCGAGGAGTATGGAGCGTCCTCGTTCAAGCATCTT
CCGGTTCTGGAGGTGAGTTTATTGAAGTGCGCTGCCGCAATGCAGCACCC
CAATGCGCGTAAAAAGCAATCCGTACAGCCGGGTGGTCGAAGCCTCTTTT
GTAGGATACCAACCAGGTACTGTACCGCAAGTATGAAATTATTATTTCGG
AACGTCCCGTCTCATCATCGCTCAGATGCTTAATGCATTGAGTTTTTGTC
GCGCAGTGGGTGTAGCACCTCCCCTCCGCAGTTCGCTGCCGTTCATCGTT
TTATTTTATTTGTGCTATTAATAGCGCTCTCGCGCTTGTCTCTCCACGAC
AACCACAAGCAGAAGATGTCGACAAAAAAGTGTACTTTTGGTAGTGCCAG
GATTCGATCCACTGAAATCCCGCAAACTGGGGCGTTCGTGCCACCAGATG
GACCAAATTATTACGGTGGCCGCAGCATATGGTGCTACACGGAGACACGA
TAATCATTGAACAGTAGTCCTTCGCCCGCCCTGCCCTCCCGGATTATTCC
CTCCAACAGATGGACGGCGCCGAGTACACCCAATCCACCGCCCTTCTACG
TTACGCTGGGAAGCTTGGTGGCCTATACCCCGCAGATCCGCTCGTCGCCA
TGAAGGTGATATAGATAGATCCATTATTTTATGCTTTCATGGAATAGCAA
TAGGGCAGCCTTTTTTTATAAGCGTATATTTACATAGACACGCAGGCAAC
CATGCCATGCATGAGCCGGCGTCTAACTGTTTTTGTTGCGATGCGGTTCG
TATTTCTAGGGCTGTGACATGGTATCTGGTTTGCCGGTGCGCAAGTATTT
CGCGCCCCGCCCTTGAGAAGGCAGATAGCCCAGATATTGCTGAAACCACA
GGGGACTCATCGATGGTTGTGGTCGTGGTTGTCTGTACGTTTACTTATTT
TTAAAGAATAATTTCGAGTTGATGTACAATTTTAGTGGCCGACATTGCCT
TGTTGTAGCAACCGTAGTATAGAAAAAAAATGCTAAGAATAATACTGATG
AACGGCCGTTTTTCATTATTCCGCTCCGCCTCCCTCGGTGCTGCTGTATA
TATATCGTCATACAACAGGTGGACGAGATCGTGATGGCTGCAGAAGACGT
CAACATCACCTTGTTCTCTACCATGGCCATCAAAGACCCCCAAGAGCAGG
CAAGCGATTCATGTTGTATACATACCTCGTTTAAATTTACGTTAGTTATT
ATGTGGTTTTACACAAAATTCACCAATCATCATCATCAGCCGTGACGTTG
TAGCGTGGTTCGGGACCAAGAGAACAATCGTCAACTTCAACTGTCTGTCT
TGTCTGTTTGTCGCAGTGTGACGTCTTGGTTGTGCGTATGCTATCAATTC
TCACATATTTTACATTGGGGGATGCATAACGCAGCAGAGGTTTTGCTGGG
TAGCTGTCGTCATGACTTTCCTATGGCCACAATGAATTGCCACTCGTATT
ATACCTGGGTTTGAGACACCGTGCTGAAGCAACTGAACGGGCGGTGGAGG
GGGCGGGTTCCAAGAATACATGCTGTGCACAATGGTCGTTCCGTTCGAAT
ATTGTTCTGTTGTACTGTAAATACTTGTTACAGTGCTATTATATTCTACC
TAATGTGTTACAGTATGAACACTCGTCAAAATACTCTGTTTCTATTGCCC
CCATACTATTACTGCAATAGTTATGAGCGTTTTTCGTCCAGCTTCTTGCT
CCTGTCCGTGTATGGGGGTGCTACATATCAGCGTTTTTCGTGCATCGACC
CGCCCCCCCCCCCTTATTAAGGGTATCTTCAACTATACATAGTAGAGCAC
TTGGATTGTTATCTGTTGTTGAAATGAGATATATAGCTCTATCGTACACG
GGTTTGGGGTTTGGTTAGGTCTGACTCTCACGCCTCCCCCACCCCCCTCC
CCCGCACATCGCTCCTTGCTTTGGCAACAGTTGAAAACCCGGAAGGAGTT
GTCGGCCGGGAAGCTGAAGACTATGCTGGAGGGGCTCGCGGCCAAACTGG
CAGCAAACCCTTCGTCGCCCTACTTCGTCGGCGACTCTCTCACCATCGCC
GACCTGCAGGTAGCTATAATATGTACTGTAACTTGAACTTTCCCTGGTTC
GAATCCCGGTGAACAACAACATGTCGCTTGTTTTTCTGTGCTCCCTTCTT
CGTCTTCGACTCTCTCACCATCGCCGATCTGCAGGTATAGGATACGTCAA
GCCAACGGTGGACGGATTGCCGAGTCGGTCGTCTTTTGTTTTATCTTCGA
CTTGATCAGCCCTCGCAGAAAACATGTGGTCATAAGAGTGCGAGCTAGCA
TGCTCTATTTGTTGGTGGTGTGGGTGTTGTTGCTTGCCTCCACATTAAAA
CCTCGATATTTCATATTTTTGCCCTCCTACAACATCCAGAGTACCTATGT
AGTGTGTATACTGTGATAGTGATGATACCTTGGGATAGAGACATTCTGTG
ATGACAAGCAAGCTATCTATCACATACCAGGTATGCTCTGAGAAACAGAC
AAAAACCGATTCTGATCCAGCATGCGTACGTCCGATATATTCACTCGTTA
TTTTTCACCGTCTACTGGCAGGTGCAATCGATAGTCCTTAACGTGGAGCT
AGGGTTGCTCGAGGGCTTCCCGCCCAGTCTAGTGTCGGACGTAGCTCCCA
CGATCAAGGCACACTACGACGCCGTCATGAAGCACCCCAAGGTCAGAGCG
ATCCCGACTCTACATGTTGCATGTGGTGCTCAATTTGTTGGTGATGCTTG
TTGTATCGAGTCGTTGCGGCGAGCTGTATATGATGTGACGATTATTAGAC
CACAGAGAGAGGCAACTACTGTAGTATCCAATAGGCATGTACCCCTTTAT
TTGCCTTGTTTGCCGATTTGATAATTCTATGTCCGATTCCACCACACGTC
ACACGTCTGTCTTTCCATGTCGGTTTTCGATTTCAGGTGAAGGCGTACTA
CGCTTCCAAGGCTTGAGGGATCGGGGGGAGGACTCCGCAGTAGACCGCAC
GAAGAGTATACCATCGTATTTTCTCGGCCTATTATTGTCACACGTAGACG
CTTTGACGGCAGGCAGTGCATCGTGCGCTTGTTGTATTTGTGTGTTTAGC
TGCTGCATCCTCTATTCAGCGGTAAGTAGTCTCTCGCTGATGTTTGTCCG
GCATGTTGCATGAGGCTTTCCTGTTATGTCATTCGCCGTTGAAGCGGTTG
ATATGTTTGTTGCTTCGGTATCTATCTTGGTTACAGTGTTGCTTTAGAAG
CTACTTCCTGGGGGCAGCATTGATAACGCGGTAGCCCTGTTCCGCAAGCC
GTAGGTGTCGGGAGTGTGGAATAGTCTCTTGTAAGGACAGAGTAGTATTT
CACGAAGCACCAATTGTCGTGGCTCTTCCCAGCACAAACTGGGAACGCGA
TTGAGCGGCATCCATACCTACCTGTCTTGCCTGCTCCTTCGGTCAAGCAT
CTCTTGCCACTACTACTGTACCGAAGTATATGTGGTTCCTATTGGCTTGG
GTTGGCGTTACTGTACGAGTTGTCGTCATCGTACCTTGTAGGCATATCGG
CCGCTATTATAATACCACCACGCTGGTATTCCGACCCGACTAAAAAAACA
GGCGCAGAGGTGTTGGTATAGCCTGGCATAGCCTACATTTTGAGTAAGGC
TTGTGTTATTGCTGTTAGCTGCAATCGGGGAGGTACTCATTTGTTGTTTA
TCTTAGTCATTTGAAGTTTGTCCAGGCATCCCTTTCGAGACGGAGCATGT
GGGGGGATCAACATGTTACAAAGTTTGTTGTTATCTTCTTTTTTTGTTTA
GGCGCCGTTGTTATCACGTCACACACTCGGATTTCGTGCATCGTGTTCTC
TTCTTGTGTTGTTTTGAGTGATCAGCTTGCTTGGTGTGTTTTGTCACAGG
GTGCCGCAGGAGGGGTTATTTGCTGCTCGTCGCTTCAATACGCTGATGAT
GATGATGTTGTGGTGGTGCTGTACTACTGTATGTTGTAGTAGTAGTATTT
CAGCTTTCGGTGGTCTAGCGTCGCCGTGGAGACTGTTAGGTTATGCACGA
GTTGTGCTTCTTTGCATTGAGACCATCGATTGTGGAGTGGACACTATTAT
AACAATGAAGATCTTTATTATTGAGCTACGAAGTATAAACTGCCATGATG
CTTCCTTATCGCAGGGGCGGGCGGGGGCATCAACTTTTATCTTCTTTTTT
TGTTTAGGCGCCGTTGTTATCACGTCACACACTCGGATTTCGTGCATCGT
GTTCTCTTCTTGTGTT
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Coding sequence (CDS) from alignment at D-dudresnayi_contig1035:21276..28241+

>mRNA_D-dudresnayi_contig1035.372.1 ID=mRNA_D-dudresnayi_contig1035.372.1|Name=mRNA_D-dudresnayi_contig1035.372.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1302bp|location=Sequence derived from alignment at D-dudresnayi_contig1035:21276..28241+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGCTATCATCCTGAACTACTTCGACCTTCCCGGACGCGGCGAGCCCAC
CCGAGTCGCCCTCTCAATTGCCGGAGTTGATTACGTGGACAAGCGTTTGT
CGTTCGAGGAGTATGGAGCGTCCTCGTTCAAGCATCTTCCGGTTCTGGAG
ATGGCTATCATCCTGAACTACTTCGACCTTCCCGGACGCGGCGAGCCCAC
CCGAGTCGCCCTCTCAATTGCCGGAGTTGATTACGTGGACAAGCGTTTGT
CGTTCGAGGAGTATGGAGCGTCCTCGTTCAAGCATCTTCCGGTTCTGGAG
ATGGACGGCGCCGAGTACACCCAATCCACCGCCCTTCTACGTTACGCTGG
GAAGCTTGGTGGCCTATACCCCGCAGATCCGCTCGTCGCCATGAAGATGG
ACGGCGCCGAGTACACCCAATCCACCGCCCTTCTACGTTACGCTGGGAAG
CTTGGTGGCCTATACCCCGCAGATCCGCTCGTCGCCATGAAGGTGGACGA
GATCGTGATGGCTGCAGAAGACGTCAACATCACCTTGTTCTCTACCATGG
CCATCAAAGACCCCCAAGAGCAGGCAAGCGATTCATGTTGTATACATACC
TCGTTTAAATTTACGTTAGTGGACGAGATCGTGATGGCTGCAGAAGACGT
CAACATCACCTTGTTCTCTACCATGGCCATCAAAGACCCCCAAGAGCAGG
CAAGCGATTCATGTTGTATACATACCTCGTTTAAATTTACGTTATTGAAA
ACCCGGAAGGAGTTGTCGGCCGGGAAGCTGAAGACTATGCTGGAGGGGCT
CGCGGCCAAACTGGCAGCAAACCCTTCGTCGCCCTACTTCGTCGGCGACT
CTCTCACCATCGCCGACCTGCAGTTGAAAACCCGGAAGGAGTTGTCGGCC
GGGAAGCTGAAGACTATGCTGGAGGGGCTCGCGGCCAAACTGGCAGCAAA
CCCTTCGTCGCCCTACTTCGTCGGCGACTCTCTCACCATCGCCGACCTGC
AGGTGCAATCGATAGTCCTTAACGTGGAGCTAGGGTTGCTCGAGGGCTTC
CCGCCCAGTCTAGTGTCGGACGTAGCTCCCACGATCAAGGCACACTACGA
CGCCGTCATGAAGCACCCCAAGGTGCAATCGATAGTCCTTAACGTGGAGC
TAGGGTTGCTCGAGGGCTTCCCGCCCAGTCTAGTGTCGGACGTAGCTCCC
ACGATCAAGGCACACTACGACGCCGTCATGAAGCACCCCAAGGTGAAGGC
GTACTACGCTTCCAAGGCTTGAGTGAAGGCGTACTACGCTTCCAAGGCTT
GA
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