|
|
Homology
BLAST of mRNA_D-dudresnayi_contig1033.350.1 vs. uniprot
Match: A0A6H5L1H4_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1H4_9PHAE) HSP 1 Score: 233 bits (594), Expect = 1.350e-69 Identity = 115/181 (63.54%), Postives = 136/181 (75.14%), Query Frame = 1
Query: 313 AATSDVITITSENFADTVKQGTWFVKFYTDWCKYCQRLQPTWEELATGLKGKVNVGQVNCDREKALCNRFHVKVYPTLVHVHNRKGRVYKNSRELEALVAFAERGYITAKAYSSLRSPFGLLENFKAALLKLSMQAKDSFVEQMEMGTPMWMLCLAVVIGLVSITVIAALILVGAKPIKQD 855
A SD+IT+TSENF +T+K+GTWFVKFYTDWC +CQRLQPTWEELAT LKGKVNVGQVNCDR+ +LC RFHV YPTLVHVHNR+ RVYK SR EALVAFA GY A S+L+SPFG LENFKA + + +++AK V +E GTPMWM+CL V L + A +LV K K+D
Sbjct: 72 APASDIITVTSENFKETIKEGTWFVKFYTDWCPHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVTGYPTLVHVHNRRSRVYKKSRGKEALVAFALNGYKKQVAVSALKSPFGPLENFKALIAREALRAKKFVVSTIEKGTPMWMVCLCAVAVLXXXXXVVASVLVSIKRPKED 252
BLAST of mRNA_D-dudresnayi_contig1033.350.1 vs. uniprot
Match: A0A7S2WDG4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDG4_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.890e-22 Identity = 55/140 (39.29%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 307 LGAATSDVITITSENFADTVKQGT------WFVKFYTDWCKYCQRLQPTWEELATGLKGKVNVGQVNCDREKALCNRFHVKVYPTLVHVHNRKGRVYKNSRELEALVAFAERGYITAKAYSSLRSPFGLLENFKAALLKL 708
+ A SDV+ +TS+NF + T WFVKFY WC +C++L P W+ELAT LKG VNV +V+ + +L RF ++ YPTL+ K Y+ R LE+LVAFA+ GY + +P L+ K L
Sbjct: 23 VAAEESDVVVLTSQNFEHDTQASTGATTGDWFVKFYAPWCGHCKKLAPVWDELATELKGVVNVAKVDAEAHSSLRKRFRIRGYPTLIFFSQGKMYKYEEKRSLESLVAFAKGGYKDDTEAVDVPAPPDLIATLKGEFFGL 162
BLAST of mRNA_D-dudresnayi_contig1033.350.1 vs. uniprot
Match: A0A0G4FAB9_VITBC (Thioredoxin domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FAB9_VITBC) HSP 1 Score: 100 bits (249), Expect = 1.460e-20 Identity = 58/147 (39.46%), Postives = 82/147 (55.78%), Query Frame = 1
Query: 304 GLGAATSDVITITSENFADTVKQ------GTWFVKFYTDWCKYCQRLQPTWEELATGLKGKVNVGQVNCDREKALCNRFHVKVYPTLVHVHNRKGRVYKNSRELEALVAFAERGYITAKAYSSLRSPFGLLENFKA-ALLKLSMQAK 723
G A S V +T NF + G WF++FY +WC +CQRLQPTWEELA LKG+V V +V+CD + +RF+++ +PTL+ + + YK +R+L AL AFA GY + P LL+ K A+L L M +
Sbjct: 22 GDSTAKSAVRVLTDANFEHDTQASSGATTGDWFIEFYANWCGHCQRLQPTWEELAANLKGRVVVAKVDCDANTSTRSRFNIQGFPTLLLLRQGRMYEYKGARDLAALEAFATGGYKKTPG-KPVPPPESLLDQLKKEAMLLLDMSMR 167
BLAST of mRNA_D-dudresnayi_contig1033.350.1 vs. uniprot
Match: A0A1Y1WL38_9FUNG (Thioredoxin-domain-containing protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WL38_9FUNG) HSP 1 Score: 106 bits (264), Expect = 2.190e-20 Identity = 45/99 (45.45%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 325 DVITITSENFADTVKQGTWFVKFYTDWCKYCQRLQPTWEELATGLKGKVNVGQVNCDREKALCNRFHVKVYPTLVHVHNRKGRVYKNSRELEALVAFAE 621
+ + +T ENFA+ G WF+KFY WC +CQ L P W EL L+GK+NVG VNCD +LC++++V+ YPTL + + + YK REL+AL F +
Sbjct: 367 EAVVLTKENFAERTASGPWFIKFYAPWCPHCQHLAPVWAELGGKLRGKMNVGSVNCDEASSLCSKYNVQGYPTLKLLWDGETADYKGERELKALEKFVD 465
BLAST of mRNA_D-dudresnayi_contig1033.350.1 vs. uniprot
Match: A0A2G5B9K3_COERN (Thioredoxin-like protein (Fragment) n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B9K3_COERN) HSP 1 Score: 104 bits (259), Expect = 3.870e-20 Identity = 46/98 (46.94%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 328 VITITSENFADTVKQGTWFVKFYTDWCKYCQRLQPTWEELATGLKGKVNVGQVNCDREKALCNRFHVKVYPTLVHVHNRKGRVYKNSRELEALVAFAE 621
V+ +T ENFA +G WFVKFY WC +CQ L P WE+++ LKG+VNVG+VNCD LC +V+ +PTL + + V+K SR+LE +V F +
Sbjct: 134 VVVLTKENFAKETAEGPWFVKFYAPWCPHCQTLAPVWEQVSERLKGRVNVGKVNCDENGKLCAEHNVQGFPTLQLLWEGEPTVFKGSRDLENMVNFVD 231
BLAST of mRNA_D-dudresnayi_contig1033.350.1 vs. uniprot
Match: A0A7S2V1W0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1W0_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 8.860e-20 Identity = 76/230 (33.04%), Postives = 112/230 (48.70%), Query Frame = 1
Query: 208 LFFTIAVVGQVAGFAFAGTTTTSHGKTVKAYVGLGAATSDVITITSENFADTVKQGT------WFVKFYTDWCKYCQRLQPTWEELATGLKGKVNVGQVNCDREKALCNRFHVKVYPTLVHVHNRKGRVYKNSRELEALVAFAERGYITAKAYSSLRSPFGLLENFKAALLKLSMQAKDSFVEQM--EMGTPMWMLCLAVVIGLVSITVIAALILVGAKPIKQD*RGKIQ 873
LF + + Q A F+FA T + V SDVI + +++F + T WFV+FY WC +C+RL P WEE+AT LKG VNV +V+ + + L RF V +PTL H+ K YK +R EAL F + GY ++ P F A+ K AKD + ++ E P+ +L +++ +G V+ AL+ G K K+ R K Q
Sbjct: 10 LFVGLLCISQHATFSFAQDDTVEETEKV----------SDVIVLDNDSFEHLTQASTGATTGDWFVEFYAPWCGHCKRLTPVWEEIATELKGTVNVAKVDGTQNRKLLKRFGVSGFPTLKFFHHGKMYSYKGARTAEALTEFVKAGYAEQDG-EAVPPPPSFWSEFVEAIKKARGLAKDLIIHKITGEFNRPVVIL-VSLCVGSSLCIVVFALVF-GIKSGKEHARRKKQ 226
BLAST of mRNA_D-dudresnayi_contig1033.350.1 vs. uniprot
Match: UPI000644C2D5 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644C2D5) HSP 1 Score: 97.1 bits (240), Expect = 1.810e-18 Identity = 44/108 (40.74%), Postives = 68/108 (62.96%), Query Frame = 1
Query: 322 SDVITITSENFADTVKQG-TWFVKFYTDWCKYCQRLQPTWEELATGLKGKVNVGQVNCDREKALCNRFHVKVYPTLVHVHNRKGRVYKNSRELEALVAFAERGYITAK 642
SDVI +T +NF VK G +W ++FY WC +C++L P +EELAT +KG VN+ +++C E++ C R+ + YPTL V + ++ R LEAL + GY ++K
Sbjct: 34 SDVIVLTDKNFDQNVKSGGSWLIEFYAPWCSFCKKLAPIYEELATKVKGNVNIAKIDCTVERSTCQRYEIMGYPTLKFVSSGVVYEHQGERTLEALEQYVLEGYKSSK 141
BLAST of mRNA_D-dudresnayi_contig1033.350.1 vs. uniprot
Match: G9P3W6_HYPAI (Thioredoxin domain-containing protein n=5 Tax=Trichoderma TaxID=5543 RepID=G9P3W6_HYPAI) HSP 1 Score: 98.2 bits (243), Expect = 7.110e-18 Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = 1
Query: 280 GKTVKAYVGLGAATSDVITITSENFAD--TVKQGTWFVKFYTDWCKYCQRLQPTWEELATGLKGKVNVGQVNCDREKALCNRFHVKVYPTLVHVHNRKGRVYKNSRELEALVAFAER 624
GKT K V + +T+ENF T+ Q WF+KFY WC +CQ + PTWE+LA +KGK+N+G+VNCD+E LC + YPT++ + Y+ R L + +AE+
Sbjct: 175 GKTPKKPVATANEEGTSVALTAENFQRLVTMTQDPWFIKFYAPWCPHCQDMAPTWEQLAKTMKGKLNIGEVNCDKETRLCKDVGARAYPTILFFKGGERSEYEGLRGLGDFIQYAEK 291
BLAST of mRNA_D-dudresnayi_contig1033.350.1 vs. uniprot
Match: A0A084QUT2_STAC4 (Uncharacterized protein n=3 Tax=Stachybotrys TaxID=74721 RepID=A0A084QUT2_STAC4) HSP 1 Score: 97.8 bits (242), Expect = 1.110e-17 Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 331 ITITSENFAD--TVKQGTWFVKFYTDWCKYCQRLQPTWEELATGLKGKVNVGQVNCDREKALCNRFHVKVYPTLVHVHNRKGRVYKNSRELEALVAFAE 621
I +T+E+F T Q WF+KFY WC +CQ + PTWE+LA ++GK+N+G+VNCD+E LC H + YPTL+ + Y+ R L V +AE
Sbjct: 308 IALTAESFQKLVTTTQDPWFIKFYAPWCPHCQAMGPTWEQLAKNMRGKLNIGEVNCDKESRLCKDVHARSYPTLLFFKGGERAEYQGLRGLGDFVQYAE 406
BLAST of mRNA_D-dudresnayi_contig1033.350.1 vs. uniprot
Match: G3JEC6_CORMM (Disulfide isomerase, putative n=9 Tax=Cordycipitaceae TaxID=474943 RepID=G3JEC6_CORMM) HSP 1 Score: 97.1 bits (240), Expect = 1.760e-17 Identity = 40/99 (40.40%), Postives = 63/99 (63.64%), Query Frame = 1
Query: 331 ITITSENFAD--TVKQGTWFVKFYTDWCKYCQRLQPTWEELATGLKGKVNVGQVNCDREKALCNRFHVKVYPTLVHVHNRKGRVYKNSRELEALVAFAE 621
+++T+E+F T+ WF+KFY WC +CQ L+PTWE+LA ++GK+N+G+VNCD+EK LC H K +PTL+ + Y+ R + +A+
Sbjct: 207 VSLTAESFQKHVTLSHDPWFIKFYAPWCSHCQALKPTWEQLAKSMRGKLNIGEVNCDQEKRLCKDVHAKAFPTLLFFKGGERVEYRGLRGIGDFTKYAD 305
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 240.7 |
| Seed ortholog evalue | 6.6e-61 |
| Seed eggNOG ortholog | 2880.D8LKF4 |
| KEGG ko | ko:K13984 |
| KEGG Pathway | ko04141,map04141 |
| GOs | GO:0003674,GO:0003756,GO:0003824,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0005793,GO:0005829,GO:0006457,GO:0006464,GO:0006807,GO:0006810,GO:0006897,GO:0006909,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0010033,GO:0012505,GO:0015036,GO:0015037,GO:0016020,GO:0016192,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0019538,GO:0023052,GO:0030968,GO:0031974,GO:0031984,GO:0032991,GO:0033554,GO:0034620,GO:0034663,GO:0034976,GO:0035966,GO:0035967,GO:0036211,GO:0036498,GO:0042175,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043277,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055114,GO:0065007,GO:0070013,GO:0070887,GO:0071310,GO:0071704,GO:0098657,GO:0098827,GO:0140096,GO:1901564 |
| EggNOG free text desc. | cell redox homeostasis |
| EggNOG OGs | COG0526@1,KOG0191@2759 |
| Ec32 ortholog description | Thioredoxin-like fold |
| Ec32 ortholog | Ec-16_002760.1 |
| COG Functional cat. | CO |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03110,ko04131 |
| Hectar predicted targeting category | signal peptide |
| Exons | 6 |
| Model size | 1634 |
| Cds size | 693 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927530.9233973-UTR-D-dudresnayi_contig1033:15057..15833 | 1622927530.9233973-UTR-D-dudresnayi_contig1033:15057..15833 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig1033 15058..15833 - |
| 1690556795.136705-UTR-D-dudresnayi_contig1033:15057..15833 | 1690556795.136705-UTR-D-dudresnayi_contig1033:15057..15833 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig1033 15058..15833 - |
| 1622927531.0609767-UTR-D-dudresnayi_contig1033:25576..25741 | 1622927531.0609767-UTR-D-dudresnayi_contig1033:25576..25741 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig1033 25577..25741 - |
| 1690556795.214207-UTR-D-dudresnayi_contig1033:25576..25741 | 1690556795.214207-UTR-D-dudresnayi_contig1033:25576..25741 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig1033 25577..25741 - |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig1033.350.1 >prot_D-dudresnayi_contig1033.350.1 ID=prot_D-dudresnayi_contig1033.350.1|Name=mRNA_D-dudresnayi_contig1033.350.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=231bp
MHAARLMSLVAGCYLFFTIAVVGQVAGFAFAGTTTTSHGKTVKAYVGLGA
ATSDVITITSENFADTVKQGTWFVKFYTDWCKYCQRLQPTWEELATGLKG
KVNVGQVNCDREKALCNRFHVKVYPTLVHVHNRKGRVYKNSRELEALVAF
AERGYITAKAYSSLRSPFGLLENFKAALLKLSMQAKDSFVEQMEMGTPMW
MLCLAVVIGLVSITVIAALILVGAKPIKQD* back to topmRNA from alignment at D-dudresnayi_contig1033:15058..25741- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-dudresnayi_contig1033.350.1 ID=mRNA_D-dudresnayi_contig1033.350.1|Name=mRNA_D-dudresnayi_contig1033.350.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=10684bp|location=Sequence derived from alignment at D-dudresnayi_contig1033:15058..25741- (Desmarestia dudresnayi DdudBR16 monoicous)
ACTCGCTGGCCGTCTGAGAGAGAGCCTGTCTACCAACCCGAGGCGCAGCA
TTGCGTGCATAGCAGTCACATCCACGCAGCATAGATCAGATTCTCAATCA
GGATCGTAATTTGTCACTTGGTCCTCGGGCAGGACTAAAGTATAGCGCAC
ACAATCATTAGCAACATGCATGCGGCGAGACTAATGTCGTTAGTGGCAGG
CTGCTACTTGTTCTTCACAATCGCTGTAGTTGGCCAGGTGGCAGGGTTTG
CTTTCGCAGGCACCACCACCACCAGCCACGGCAAGACGGTGAAGGCCTAC
GTTGGACTCGGCGCGGCGACCAGTGACGTGATCACGATCACATCAGAGAA
TTTTGCTGACACGGTGAGCTACGCAGAGTTGTGGTTGTTGTACTGCTTGA
ACTGCTGATAGCCTTTTAGTGCTGACTGATGGCGCGAGATCCGAACAAAT
GACAATACAACAGACAACAGAGAGTAGTACGTACAACAACTGTACAACTG
CCTGTAGTGTTGTTGTACAGTAGTACAGTAGTACGAGTAGTAGGTGCTTG
TTTGGTTGATATCACAAACATAGACGGCTTTTTTTTCACTAGGTAAGACA
GGTATTGCCTTGTGTCAGATCGATACTACTACTTGTACTACTGTTGTGCG
TACCTCCAGCTCGTGTGTGTGATGTCGTCGTGTTGTCAGTCATGCATCAC
CGAACGATCCCAAACCGCAGCGGAGTGATCGATCGCTATGATGGCACAAC
AATGATCCACCCCCCTCGTAGTGCCCAGGATTGTCAAACGAAACACCGTC
AGGTGATTATGTTTCAGCTTAGCACTTCCCGGATAAGATAACCACACAAG
CACACAAGGCAAGTCCTTTTGCCGCTCTCGGTCACGTCCCGCGTTCTTCT
TGACGCTTTTTTTATTATACGAGTCATAGAGCTAACATGTTGAGAGCGTG
GGGGTGGCGCCGCTCGGCTTCGGCCCTTGTTGGCAAGCAAGCGTGCTGCA
GTACTGTATGAGTACTGTACCGGACTGCACGCATACTAATATTTTGTGCG
GAGCGAGGTAGATGGTCGTACAGTACGAGTACTTGATTTTGTATCTGGCG
TGTTCGTACCCTAGCCAATGAGATCGCTCCGCGTTGCAGTGTGATTGCGC
AGCATGTTCGAAGGTGGTTTGTCGGTGTGTTTGTGGGCCTACAGGGGCCA
CTCCTTCTGCCTCTACATTGCGAGAACCAATATTACACAAGCTAAAACAT
ATATCCATGTACTGCACTGCAATATACACTACAGTACCACTACGGTAACA
GTAGCTGGTGGGAGGTCCTTGAACAATAGACACTGCTGTTCGTGTAAAAT
ACGAAGTAGCACAATAGCTATGTGACAATAGGATAAACGACTGAAACAGG
TACACCCGGTGCGTGTTCGGCCACTAATAGGTACATTTTCGACCACCTGG
CCGCGAAAGCCACTACCACGACCAAACTCCATGTTTTCATCAAAACTCTT
TCGCACACACCAGGTCCTCGCCCCATCGCAGTCATCCCCCCAACAATTGT
GGCAAACGGTAGTGTATCCCTGTCTCAAACTGTCGCGGCAAAGAAGGGGT
TACCCCATGCGATATCGATAGTAACTGTTTTTGGTCCGTGTAACTTATTA
AGGACTTTTATGGAGGACTGGGTACGTAGATACCAGATATCTCCGAACAC
GTCTGCCAACGGTAGGACAAGATACATCAATCCTGACAGTCATGGGTCAC
CGGCTGCATATGACGTAAGGTCGACCAAGTAGCCCGGTCGCAACTGGATC
CTGTTCGGCGGATTCGGCATAAGCCGTCCCAACCTCAGGGAACCTAATTA
CGGTGAGCCTCGAGCGCGTGCCCCATTATCAGTCGTAGACATAGCGTCTC
CCTGCTACATTACACAAAGGGAATGACAGCCGAGACTACAACAAGGGAAG
TGGCTTCTACAATGGTGACGTTGATGATCTACATCCCCACCTTGAGCTAG
GCTGTCACCCTTGATAGTTACATTATTTTGCTAAGTGTACCTGTTATAAT
CGGAAGTTACGCGTTTATTCACCTGTCACCCATGTCAACTATAAATACCG
CAGAAAAGGCATACCGCGTTCCAGAACCAGGCTCTTCGCAGATACTGCTG
TAGTAGAAGGCGAGTTTATGCAGACTACACCAACCACGGTTTTTGCCGGC
AGCGGGTTGCCAACATGTATGTGTACACTGTATGGACTGTATCACCACCA
TGTCTGCTATGACTTGCCACGACAACAGAAACATTGTTACTGCTGCTGAT
GAGAGTAAGGAAGGAGATGGCAGACTGGGTAGCGACGTTTCAGTTTGACT
ACAGTACGTCGTGATAACAGCCCCGTACCTCTCTTCTTGCTGTTGAATTA
TCGGTAGCACCAAATCTCGTTGTTTTTTTCTTCTTCTTGTTGTTTCTTTC
CATCCTTATCTATGTCGTTTTTCTTTCTTTTTGCTCTCTTTTTTCGAGTA
CATACATGTGTACGCACGCACAGTAACTGCGAGTACTAAGAACCATTCGC
CTGTGACGACCACACCCGCCCCGAAAATATAGCCTCCATAGACTTTTGTG
TTGCTCGTCGATCGACACACGACTCAGAGAGAGACAGAGAGAGGCGATTG
CCCACGAATCGAGTGGTGTGTGCGTGTTCTATAGTGGGTGCTGGGTACAC
AAGCAAGCACGAAAACCAAAAATGATGGCGAACGTAAAAGGTTGTACAAC
ATATATGTATGTATTTATTCGTGGTGTGATCGAGAACCTTAAACCCACAT
TCAATATCGTATCGTGATTTACACGAGCTGCAGCATCGTACAGCATAAGC
ATTGTTTCGGATGGGTGACAGCTTTAGCACACACCTCTTATTTTGTCACT
ATTGATTAAACGTGAGCATACGAACGCGCTCTCCCCCACTATAACAAAAC
GAAGCCACGGAGAAGTGACTGACTCACAGTTAGACAACCACCTACTTGAG
CTTGTCCACATACCACACACAGATACACAGCATGCCTCGAATGCTTGAGG
TATAGATAGACCTCGGTACATGACATAGCAATATGGTAAGGTACAGGAGA
AGCAGTCGCACTCTCGGGGACTCGTTTTGTTTGGTTTGTCTTCACCGAAC
CAAAAGTAACATGGTACCTTTCTTGCTGCGACCTTAGGAGGAGTTCCGTC
TCCAAAATAGTAACAACGCAGCCTAGCTTCTCGCAAAAATGCTTTTCTCC
AATCATAATACGCGTTCTTTTATCGGTTAGTGTACTCTGCGGATTGGATG
GCACTTTAGCAAGAGATGTGTGCGTAGTCTATTTTTCACGAGGAAAAAAC
AAAAACGACATAGATGAAGAACATGGAAAGAAACAAGGGGAAAGGAAGTC
GAAAACAAGGACATCAAGAAGACAAAAAACCAACGATAATTGGGGCTACG
AGTACTCAGCAGCAAGGAAGGGGGGTATGGGGACTGTTACTGTAGTCAGA
CTGAAACGGCGCCACCTCCTTCCTATCCTCTCATCTGCAGCAGTAATTAT
GTTACTACTGTTGTCGTGACAGGTCGTGGCAGACATGGTGATGCGGTCTG
CACACATATCCTGGCTACGCGCTACCGGATCCATGTGGAGATCGTAAATC
GAGGCTCATAACCTGTTGGAATGGTGTCTTTGTCGTTGCTTTGTAGTGGC
TCTGTCTCAGTAGTAAGAGATTTCGCACAGGTGGCACCAGAGACTGAAGT
TCTCCTTGGTTGTTCAGGAGAAGGATGGGTTTTTTTTTATTTTTCATCAT
TGTTACAACTATGATACATCAGCCGTGACGTTCTAAACTGGTTCGGGATC
GAATTGGCGGTTATTGTATATAGTGATGAAAAAGGAAGAAACCAGAAGAT
ATTCGGGAGCGTGGTCAAGGGGCGGTAACCACACTCGACCATCTCGGGAA
TATGCACACGCTACGGTCTAATGGGCCTCACCGGCTAGTGTACTTCTCCA
CCTGTCCGACCTATAACAACCTTCCTTGATATCTGCTGTGCTGTGGCGGT
TCACTATCGTTGCAGTACCGCTGTACTACGGGGGGGAGGTGAGGGGGGGG
GGGTAACTTTATATGTTCATACATTGCCTCTTTGGGTGGCTGCCTCCAAT
GGTTGATACTCCTACAGGAGCAGAAGAGCGACCGACATACTTGGGTTATA
ATGACAACGTCACAAGAAGCATCGCAGTCTTATACTCACTGTATATCGCC
GGTGGCACGTTGAGGTGTGGGGTGCGACGTGTGACAACTGTCTGTTGTCT
GTTTCTCGGACGCCGGCGCTGGCCTCTCAGGATTTTGTTTTACAATGGTC
TCTCTCTACATGTTTTTATTTACACCACTGTCGACACACACACAGCACAC
AGCCTATGTTCGATGCTGTCACCCAACGGGTACTACTTGGAGTCCTTGGT
CTGTCGGTCGCACGCCGATGATCTACAGTATCCAATGGCATAATAACCCG
GAGTGATATACCCACCCCTCTCCACCCCGGCCACCCCGATCTATGATAAT
AATTTTGTACTACTACTGTTGGTTTTTGTCCCATACACCATGCTGGACAG
GTGAAACAGGGCACGTGGTTCGTGAAGTTTTACACGGACTGGTGGTGAGT
TTCTCGTCCCTTTGGGCAGACCTTACATATACAATGATTCCAAGTACTAC
GTGTACCACTTATTTTTGGCTTGTCCGTATGACATGTCGAGGACTGTGAT
GTTTACCGAAGCTCGCACGTAATGTCAATGTATATATTTGAAGGGGTATC
TCACGTTGGAAGGCCAACTGTCTACATACCTACGAGGTATATTTTTCTCG
GGGGCGTATATCTTGGGACGGCGCTGCGGTGGCTGCCGCAGCAAAAGCAC
CAATTTTTGCACCGCCTGATTCTTGTTTTTAGCACACATGTTTGCGGCAG
GAGATACAACATAACTCGTAGAATACAAAAAACCAGACACAATAGCATAA
CACATAGCTAGCTTTAGAGCTCTTAACCTACGAAGAGGTCTAGCATATAC
CTGGTATAGAGAGTAGGGACTTTTTGTGATTAGTTGTTGAGTGTTTCAAG
AAACGTAAAAATAAGTTAAGTTGCTTCTTTTTTATCCCATGGTACGCCCA
GCAGGTCATGCGTGTACCAATTTTTGCGTTTGTTTGTTGGCCCTCCTCAT
GGTCGTGGCTCTACAAACCTCCTTATTCTGTTTTATGAGGCCAGAGCAGC
CCCCCCCCCCCCCGCCCCTCTCCCTCCCCACTGCCATCGCCACCATCGCT
CCCCAAGTTGGCGTTGTACGGTGTACATATTACAAAGTAATAGAGAGGGG
ATTTTTCTGGAGTTTTGTGCTCCCTACTATTTCGCGTGTGGGTTGGGTTA
GGGTTCGGGTTGATGCTGGGAAATTTCCTGCCTGCCTGCGTACCCCCACG
GTCGTACTATTTATATTTATTGATGGTACCGTAAACTAAACGATACCCCA
AAGATCTGTTGCACCATTGTAATCCAACCTCGTTGTACACCCTCATGGCT
CATTACTCATTACCTTCCTCGCACGCGATCTGCTGCTATTGCTGTGTGTG
TGTGTGTTTGTGGCGTCTCGTGTGTGATGCGGCCGTGGACCTTGCAGCAA
GTACTGCCAACGATTGCAACCTACGTGGGAAGAGTTGGCGACGGGTCTCA
AGGGAAAGGCGAGTGGGGTTCACGAGTAGTAGACGATTCTATCATGCTGA
ACTGTTGCTGTGTTGCTGTTGTTACATAAACTGAAAAAGCAAGCAATAAT
CATAACAATCATCGGCATCATCATCATCACCATCTTCATCATGATGATCA
TCATCGTCATCGTCATCATCGTTATCATCATCATAACCACAATCATCATC
ATTATCATCATAACCCCAATCACCGTCATTATCATCACCGTCAACATCAT
CGTCGTCGTCATCATCATCATCATCATCATCATCATCGTCATCACCATCG
TCTTGATCATCGTAACCATCACGATCTTCACCATCGTGCCCGGAAGTCCA
GACTGTTGTCTGCTGTTTGTACGTGGTAACTAGTACTCTATGCGTGTATT
GACAGGCGAGCGAGCAGGCAGGCTCTCGTCCCTCCCTCGTGTATCCCTCA
CCCTTTGCCTCTCTCGTATCATTCCAGTGACATCATCATTTTGCTTTTTG
TCTACAAAAATGTTTCAATTTCAAGTTGCAATTTTGGTGCTCTGATGTAG
CATGTGACCACGGAAGTATTTTGAAATATCTCTACTCGTATGTATCATTT
ATGGTAGGATAGGATAATCAGAACAATCCGTGAGTGCGCTGCTGGATGTC
GTACATGTCGTACTCGTAGGACATTTTTCTTTAACGTTTTTCTTTAATGT
GAAGACAACAATATCAACAACAACAACAACAACAAATACTTGGGCCGTGA
CCTATTTTATCCGGTCCACTCTCTCTCACACACACACATGCACGCACTCA
TGCATGCACACTATACACAGGTGAACGTGGGGCAGGTGAACTGCGACCGT
GAAAAGGCGCTCTGCAATCGGTTTCACGTGAAGGTGTACCCCACTCTGGT
CCACGTGCACAACCGCAAGGGTCGGGTTTACAAGGCGAGGAAAATATATA
ACGGTCGTGATACGAGCGTATCTTAAGCTTTGATACTGTACTCTTTTTGA
GGTATGAGCGTATCTTAAGCGCGTTGATATTGAACTCTTGTTGACGGACC
GCCGCCGCAGCATTAGCATCCTTTATGAGGGGAGTCGAGGTCACACGGAC
ACACGACACAAGACATGCGGCCCCGCTGAAAACTTGAAGTCTTCGTCTCG
TCTCATAGAGCATGTTTCGAAGTATAATTGGTACTACTGATTGTTGTACG
AAGTACTACTTTTCGTGATGCCACAAAAAAAAAACATATATCTGCATTGT
TGTTGTTGTCAACACATTACGCATACTATTGTAGGTCATGACCTGTAATA
TAACCCGTGGTCGCAGGACATGCTCAGCGCTATCTGGATGGAAGGGAAGA
AAGGCAAAATGTAAAATATCCCTCACTGAGATAACATCATACACAGATGA
TGTGTTTTTGCTATTTGTACCTTAGCTATTGTTGTACTCGTACCTCAGAA
AAAAAAAACTCATATCATGCAAATATACGTCTATTAATACTACTGCCTGG
TAGTATGCTCCACTTATAGTGAAGTTTGAGATCGAATCGCTCTGAAAACA
CCTTTCTTTTATTAACAGTTCGATTTTTGAGATTTTGAGATCACGATTTT
CGATTATTGGGCGCTGATCTTCGATCCTTATTGAGATCGAGATTCACGAT
TCTCGGTGTTTTGTGTCCTCGCTCAAAAAATAGCATCCATATCTTCCGCG
GCGGAAAACGCGAGAGCGCGAGTAAGCACAATTCGATGAAAGTCAGCGAG
GGAAGGAAGTGCTGCACCCTTCTCGCGATAAAAATGTAGGCACGTACCAC
AGTAGTGGGGAGGGGAGAGGAGCGCCTACTATGTGACCCCGGATCTGAGT
TACGAAGAGAGATGGAGCTAGATAACGAATAGGGCGAAGATAATAAATGG
GATGAATAACAAGCAAAAACAAACGTTAAAATGCAGGTAAGAAAAACATA
GCATGTGATGCCTGTGTGTCACACTGCTGCGTTGCGAGGATTGATACCTG
CGATGATGGCAGTCGTGCAGGTGTGCTGCGATGCACGGATGATACTGTGG
CTGCAATTCGCAGAAGAGAATCGATGCGATCATGAGAAGAGCACGGTGTC
TTGATGTGTACTACTACTGTACTGTAGTTTTACATTTCACTTCACATCGC
TTTGATTAACGTTGATGCATCAAGCGCAGGCAGGCCAAGCTAAGGCAGCA
ACAAGAGTGTTGAAATCTAAAGAAGAAGCCATTATAGTGCTCAAGTACTG
GGGTACACACAAATGCGGCATAACTCAAATATGCGGTACAATAATAGACC
AATAAGCTTGAAGCCATATACAAGAGAATCTGCCTGGCCTCCGAACCAGT
TTTAGAACGTATCGGCTGTTGTATGTGGAATTAAAAAATAACAAGAGAAT
CTGAATCTGAGATAGCGCCATGTCTGACACCTCCTCCCCCCTCCCCAAAC
ATGTCGATTAACTGTCAAATATCAAGCCGTCAAGGCCTCTCTTGACGTTA
ATATACTATTTTTAGTATAGGGCTTCCTTGACGGACCGTCGGTCAACGGG
TAAAACGTAAAACTGCCGTCAACCAACATGTTTGCCCCCTCCCTCACTGA
ACCGGTTTAAATGAAACGGCAGAATTCTCGCGAATTAGAGGCGTTAGTGG
CGTTTGCCGAGAGGGGATACATAACGGCAAAGGCGTACTCATCGCTGAGG
TCCCCGTTCGGCCTCCTGGAGAACTTTAAGGCTGCGTTGTTGAAGCTAAG
CATGCAGGCTAAGGATTCCTTCGTGGAGCAAATGGAAATGGGCACGCCAA
TGTAAGCCACGGCCGGCTGGTGGTCTATTCTGTCTGTTCTTTGTTTCTGT
CTGTCTGTCACAGTAGGTTTTGGCACTATGGTTGGTAGCTTGGATCTTTT
AGAGCGGTTTTGACTCTCTATTATTACAGTGTCTTCGGGTTCGGGTTCGT
GATATAATTCTCCGAATTGCTCAACAGTCCACGTTGGTACTAATATCATA
TATACTAAAACGAAAATCCAGAAAGATCCGAGCTACCGGAACGCTAGCGC
GCGGCTCGTCTATGTCTCTATCTCTCTCTCTCTTTCTGTGTGTGTGGTTG
TTTCGTTACTTTTGTGCACTATGATGTAGTACTATATAATCCGATACATT
TTTGCGAAGATGAAATTCACAACAAGTTGATTTTGAGATGAGCCCAGTTT
CTTGCCGGTTTCTTGCTGTAGGCCCAAGTGTTTTTTGTCAGAGTGAGCAT
CGTGTTTTTGTGCGTGTTTTTTTTTATATATATACACGCAGAAGTCCTCG
GGGGTTCGCATCCCAGTATCCCAGCAAAATATTTTAGTTGTATGTGTCGT
CCTCTGTTGTTGCGGAAGGCGCGCGAGCGTAAGTAAACGTTTTTTTGTAA
TTGAAAGTTGACGAGCTACGAAAATGCCGAACCCTGTGCGTGATGATAAA
CTGGGGCATTTATCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGCCCCGT
TGGCACCGGCTGGCCGCCGGGTGAGGGGGCTGTGAAGAGAAGGACCACAA
ATTTTTGTGGCGGGGAAGTGNNNNNNNNNNGAGGGTGGGGGGGGGGGGGG
GCGGGTGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAGACCCCTGT
TAGCACGGCTTGCTCTCAGATAAGCGCGCTTTGAAAGATGAGTACAACAG
CTTCTGTGAGCTGGATTTGGAAGCTAAAGTGATGCGTGTATAAAACAAAC
ATAAAGAATGCCTTGGTGCATCGAAGTGTATATATATTGGTTTCTTGATG
ACGGGCCGCCCTCCCCACCGAAAGAGAGCCAACCAGTCTCGAATTGATGG
CCGTTTTTTTGGTTTGTTGGGAGCGCGGGAGGGGGGGGGGGGGGGTTTGT
TGATGCGTTGCGCATCTTACATGGTGATAACAAGATCGCTGCTACTGCAC
TAATATTGTTATTAGCTGAAAAACAAGTATTCTTTGATGATTTTCTCATG
TTTATTCTTTTTTGTGTTTGTAGTTATTGTTGTTTCTCCTCCTCCTTTCT
TGTTCTCCTCTTCTTGTGTTCGTTCACGTTGACACCCCTCCCCCCCCCCC
CCGTATTTTAGGTGGATGCTGTGCCTGGCGGTTGTGATCGGCCTGGTGTC
CATTACGGTGATCGCTGCGCTTATCCTAGTGGGAGCAAAACCAATAAAGC
AAGACTGAAGGGGGAAAATTCAACCGAATTATCGGTCGCGCTCTTACCGT
ACCTTGATAGATAGCATCATACCTTTTGATGGAGGCTATTCTACGCTGCG
ATGCTTTACACGCCGCGTGCTGTACCTGCTATGATTTCGATACGATCAGA
TAAGATACGCTGTCTGTCTGCTGTGCATTGTGCTCTTTCTCGTGTCAAGC
CGTGTTGTCGGTTTGAACCAATGATGTAGATATCGTTGTTGCGATTGATG
GTGATGACGGTAGTGTCTTGCTGTACTTGTAGCCTTAGTATATTAGAGCG
ATATCATGCAAACGCTGAAATGAAATGAAGTGAGATGATACCCGCGCCGT
CGGTTCCCATGTTCTGTTTGTGCCGCTTTGCCCCCGCCCCCCTTCATGGA
GGCGTTATTGATGGGTTGGTTTGTGGGAGTAATTATCAGATGAATACGCA
TGCATGCCTATGCGGTAGCATCATACCTAATGGCGGCATTGTCAGTAGCG
ATACGGGCCCTCTCAAGGAGATTCAAGAGGAGACAGAGGGGAAGGTGCTA
GAATTCGTATGATACAGTGGTAGTGTGAGGATAGTGTGTGCTTTGCTTTG
TTTTGTTATAAGCAGAGCGTTCGTGGCAGTACACAGCAGAAACGGGATGC
ATACGTAGGGTTGGGGTTAGCAATAGGCTCTAGAGCTCTATATTTGTAAA
TATACTATTTCCTTGATTGCGAATGGATGTTGTATGACGGCGGGTTATAA
ATATCATATCATGGCTGTTTGATGACGACGACAG back to topCoding sequence (CDS) from alignment at D-dudresnayi_contig1033:15058..25741- >mRNA_D-dudresnayi_contig1033.350.1 ID=mRNA_D-dudresnayi_contig1033.350.1|Name=mRNA_D-dudresnayi_contig1033.350.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1386bp|location=Sequence derived from alignment at D-dudresnayi_contig1033:15058..25741- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCATGCGGCGAGACTAATGTCGTTAGTGGCAGGCTGCTACTTGTTCTT
CACAATCGCTGTAGTTGGCCAGGTGGCAGGGTTTGCTTTCGCAGGCACCA
CCACCACCAGCCACGGCAAGACGGTGAAGGCCTACGTTGGACTCGGCGCG
GCGACCAGTGACGTGATCACGATCACATCAGAGAATTTTGCTGACACGAT
GCATGCGGCGAGACTAATGTCGTTAGTGGCAGGCTGCTACTTGTTCTTCA
CAATCGCTGTAGTTGGCCAGGTGGCAGGGTTTGCTTTCGCAGGCACCACC
ACCACCAGCCACGGCAAGACGGTGAAGGCCTACGTTGGACTCGGCGCGGC
GACCAGTGACGTGATCACGATCACATCAGAGAATTTTGCTGACACGGTGA
AACAGGGCACGTGGTTCGTGAAGTTTTACACGGACTGGTGGTGAAACAGG
GCACGTGGTTCGTGAAGTTTTACACGGACTGGTGCAAGTACTGCCAACGA
TTGCAACCTACGTGGGAAGAGTTGGCGACGGGTCTCAAGGGAAAGCAAGT
ACTGCCAACGATTGCAACCTACGTGGGAAGAGTTGGCGACGGGTCTCAAG
GGAAAGGTGAACGTGGGGCAGGTGAACTGCGACCGTGAAAAGGCGCTCTG
CAATCGGTTTCACGTGAAGGTGTACCCCACTCTGGTCCACGTGCACAACC
GCAAGGGTCGGGTTTACAAGGTGAACGTGGGGCAGGTGAACTGCGACCGT
GAAAAGGCGCTCTGCAATCGGTTTCACGTGAAGGTGTACCCCACTCTGGT
CCACGTGCACAACCGCAAGGGTCGGGTTTACAAGAATTCTCGCGAATTAG
AGGCGTTAGTGGCGTTTGCCGAGAGGGGATACATAACGGCAAAGGCGTAC
TCATCGCTGAGGTCCCCGTTCGGCCTCCTGGAGAACTTTAAGGCTGCGTT
GTTGAAGCTAAGCATGCAGGCTAAGGATTCCTTCGTGGAGCAAATGGAAA
TGGGCACGCCAATAATTCTCGCGAATTAGAGGCGTTAGTGGCGTTTGCCG
AGAGGGGATACATAACGGCAAAGGCGTACTCATCGCTGAGGTCCCCGTTC
GGCCTCCTGGAGAACTTTAAGGCTGCGTTGTTGAAGCTAAGCATGCAGGC
TAAGGATTCCTTCGTGGAGCAAATGGAAATGGGCACGCCAATGTGGATGC
TGTGCCTGGCGGTTGTGATCGGCCTGGTGTCCATTACGGTGATCGCTGCG
CTTATCCTAGTGGGAGCAAAACCAATAAAGCAAGACTGAGTGGATGCTGT
GCCTGGCGGTTGTGATCGGCCTGGTGTCCATTACGGTGATCGCTGCGCTT
ATCCTAGTGGGAGCAAAACCAATAAAGCAAGACTGA back to top
|