mRNA_D-dudresnayi_contig9999.28809.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9999.28809.1
Unique NamemRNA_D-dudresnayi_contig9999.28809.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9999.28809.1 vs. uniprot
Match: A0A6H5LEA1_9PHAE (Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEA1_9PHAE)

HSP 1 Score: 417 bits (1073), Expect = 6.630e-139
Identity = 223/280 (79.64%), Postives = 238/280 (85.00%), Query Frame = 1
Query:   19 GVSHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHERCVQMGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQ-------------ILSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEVCMPIPLPDRTGREQILAIHLRKARDAGLVSPDVDDATLASKTVSFSGADLAGLVRSATSFAIADWRARRAMVENGEGGGARLL-VTVDNFERAMLEVGMTSGGGGRGRLGMLGGRLR 816
            GV HVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAEL+HERCVQMGEDPAGLPLNL+CFDEIDALCR RGSLSGDTSGVRDSVVNQ             ILSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEVCMPIPLPD  GREQILAIHLRKAR+AGLVSP+V DA L  KT  FSGADLAGLVRSATSFAIADWR R  +  +GE  G + + +T +NFE+A+ EV  +SGGG RGRL  + G +R
Sbjct:  462 GVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHERCVQMGEDPAGLPLNLICFDEIDALCRSRGSLSGDTSGVRDSVVNQARQIKRRGGGVEVILSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEVCMPIPLPDDAGREQILAIHLRKAREAGLVSPEVTDAALGKKTGGFSGADLAGLVRSATSFAIADWRGR--LDGDGEANGEQAVEITAENFEQALREVN-SSGGGRRGRLSAIVGAVR 738          
BLAST of mRNA_D-dudresnayi_contig9999.28809.1 vs. uniprot
Match: A0A836CBN6_9STRA (Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN6_9STRA)

HSP 1 Score: 303 bits (776), Expect = 2.580e-94
Identity = 185/360 (51.39%), Postives = 212/360 (58.89%), Query Frame = 1
Query:    4 LRQALGVSHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHERCVQMGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQILSKMDGLVNLQNV------------------------------------------------LVVGMTNRKELLDEA-------------------------------------------LLRPGRMEVCMPIPLPDRTGREQILAIHLRKARDAGLVSPDVDDATLASKTVSFSGADLAGLVRSATSFAIADW------RARRAMV-----------ENGEGGG-ARLLVTVDNFERAMLEV 756
            +RQALGVSHVRGLLL+GPPGCGKTLLAREL+RRL ARPP+LVSGPE+LDKWVGEAERKVR LF  AE EHERCV+ G DPA LPL+++CFDE+DALCR RGSL GDTSGVRDSVVNQIL+KMDGLV LQN+                                                L VGMT R++LLD A                                           LLRPGR+EV + +PLPD  GR QILAIHLR+AR +GLV  DV DA LAS+T  FSGADLAGLVRSA SFA+A W      RA   +            E+ +    A + VTV +FERA+LEV
Sbjct:  390 VRQALGVSHVRGLLLYGPPGCGKTLLARELARRLKARPPQLVSGPEVLDKWVGEAERKVRALFAAAEEEHERCVRGGGDPADLPLHVICFDELDALCRTRGSLLGDTSGVRDSVVNQILAKMDGLVGLQNLVSGGTKWVTCRNGFCCHAVVVLVTRYSAFGASVVLAKMDGLVMSLQNPLAVGMTERRDLLDAAPLTDYSFAHQYNQSDQHDAHFNTISMRALXXXXXXXXXXXXXXLLRPGRLEVAVFVPLPDEQGRRQILAIHLRQARSSGLVDDDVSDALLASRTAGFSGADLAGLVRSAISFAVARWQDLHFTRAAGGVAIATSTSDSTANESADSAATAGVRVTVADFERALLEV 749          
BLAST of mRNA_D-dudresnayi_contig9999.28809.1 vs. uniprot
Match: A0A7S2EHK2_TRICV (Vesicle-fusing ATPase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EHK2_TRICV)

HSP 1 Score: 254 bits (649), Expect = 2.400e-79
Identity = 143/256 (55.86%), Postives = 185/256 (72.27%), Query Frame = 1
Query:   10 QALGVSHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHERCVQMGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQILSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEVCMPIPLPDRTGREQILAIHLRKARDAGLVSPD-------VDDATLASKTVSFSGADLAGLVRSATSFAIADWRARRAMVENGEGGGARLLVTVDNFERAMLEV 756
            + LG+SHVRG+LL GPPGCGKTLLAREL+  LG R PK+V+GPEILDK++GEAERKVR LF  AE+E+       E      L+++  DE+DA+ R+RGS+  DTSGVRDSVVNQ+L+KMDG+  + NVLV+G+TNR ELLD ALLRPGR+EV + I +PD  GR  IL IH R+ R+ G +S D       +++  L ++T SF+GA+LAGLVRSA SFA+A     RA VE+G+ G    +VTV + ERA+ EV
Sbjct:  111 ERLGISHVRGILLSGPPGCGKTLLARELADVLGVRKPKIVNGPEILDKYIGEAERKVRELFAPAEVEYAASGDKSE------LHIIIMDEMDAIARKRGSVGSDTSGVRDSVVNQLLAKMDGVREVPNVLVIGLTNRPELLDPALLRPGRLEVQLRIEMPDLEGRRDILRIHTRRMREKGGISDDSEALIEDLEEGGLPARTQSFTGAELAGLVRSAASFALA-----RA-VEDGDEG----VVTVADLERALGEV 350          
BLAST of mRNA_D-dudresnayi_contig9999.28809.1 vs. uniprot
Match: A0A7S0Z2V3_9CRYP (Vesicle-fusing ATPase (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z2V3_9CRYP)

HSP 1 Score: 248 bits (632), Expect = 2.210e-78
Identity = 146/261 (55.94%), Postives = 181/261 (69.35%), Query Frame = 1
Query:   19 GVSHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHERCVQMGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQILSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEVCMPIPLPDRTGREQILAIHLRKARDAGLVSPDVDD----------ATLASKTVSFSGADLAGLVRSATSFAIADWRARRAMVENGEGGGARLLVTVDNFERAMLEVGMTSG 771
            GV HVRG+LL GPPGCGKTLLAREL+R LGAR P++V+GPEILDK+VGEAER+VR LF  AE E       G+  A   L+++  DE+DA+ R+RGSL GDTSGVRDSVVNQ+LSKMDG+   +N LVVG+TNR ELLD+ALLRPGR+EV + + LPD  GR  IL IH R  R AG +SP   +            LA++T  FSGA+LAGLVRSA SF++A     R+ V+   GG A LL    + E+++ EV   SG
Sbjct:    1 GVGHVRGVLLSGPPGCGKTLLARELARSLGAREPQVVNGPEILDKFVGEAERRVRALFEPAEAEWGAA---GDKSA---LHVIILDEMDAIARKRGSLGGDTSGVRDSVVNQLLSKMDGVNQAENFLVVGLTNRPELLDQALLRPGRLEVHLRVELPDLLGRRDILRIHTRAMRAAGALSPSASEFIDSREQGEQGGLAARTEHFSGAELAGLVRSAASFSLA-----RSTVD---GGSAELLR--QDLEQSLGEVSAASG 245          
BLAST of mRNA_D-dudresnayi_contig9999.28809.1 vs. uniprot
Match: A0A267F858_9PLAT (Vesicle-fusing ATPase (Fragment) n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267F858_9PLAT)

HSP 1 Score: 246 bits (628), Expect = 5.000e-75
Identity = 129/213 (60.56%), Postives = 165/213 (77.46%), Query Frame = 1
Query:    4 LRQALGVSHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHERCVQMGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQILSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEVCMPIPLPDRTGREQILAIHLRKARDAGLVSPDVDDATLASKTVSFSGADLAGLVRSAT 642
            L + LG+ HVRGLLL+GPPG GKTL+AR++ + L AR PK+V+GP ILDK+VGE+E K+R LF DAE E +R   +G + A   L+++ FDEIDA+C+ RGS+ G T  V D+VVNQ+LSK+DG+  L N+LV+GMTNRK+++DEALLRPGR EV M I LPD  GR QIL+IH  K RD G +SPDVD   LA+KT +FSGA+LAGLVR+AT
Sbjct:  241 LVEQLGMCHVRGLLLYGPPGTGKTLMARQIGKMLNAREPKIVNGPSILDKYVGESEAKIRQLFADAEEEFKR---VGNNSA---LHIIIFDEIDAICKARGSVGGGTQ-VHDTVVNQLLSKIDGVETLNNILVIGMTNRKDMIDEALLRPGRFEVQMEISLPDEHGRHQILSIHTSKIRDNGKLSPDVDVRELAAKTKNFSGAELAGLVRAAT 446          
BLAST of mRNA_D-dudresnayi_contig9999.28809.1 vs. uniprot
Match: A0A7S2M5J1_9STRA (Vesicle-fusing ATPase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M5J1_9STRA)

HSP 1 Score: 254 bits (650), Expect = 7.440e-75
Identity = 139/254 (54.72%), Postives = 185/254 (72.83%), Query Frame = 1
Query:   16 LGVSHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHERCVQMGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQILSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEVCMPIPLPDRTGREQILAIHLRKARDAGLVSPDVDDAT-------LASKTVSFSGADLAGLVRSATSFAIADWRARRAMVENGEGGGARLLVTVDNFERAMLEV 756
            LGVSHVRG+LL GPPGCGKTLLARELSR LGAR P++V+GPEILDK++GEAER+VR LF+ AE E+E   ++G+  A   L+++  DE+DA+ R+RGS+S DT+GVRDSVVNQ+L+K+DG+  + NVL+VG+TNR ELLD ALLRPGR+EV + + LPDR GR  IL IH R+ ++   +S D  D+        + ++T  F+GA+LAGLVRSA SFA+A         EN +G     +VT ++ E A+ EV
Sbjct:  395 LGVSHVRGILLSGPPGCGKTLLARELSRLLGAREPQIVNGPEILDKFIGEAERRVRELFIPAEREYE---EVGDSSA---LHIIILDEMDAIARKRGSMSSDTTGVRDSVVNQLLAKIDGVKEVPNVLIVGLTNRPELLDPALLRPGRLEVQLRVELPDRAGRRDILRIHTRRMKEENALSQDAIDSIEDMSDNGMGARTDYFTGAELAGLVRSAASFALAK-AVESGFDENNDG-----MVTAEDLELALKEV 636          
BLAST of mRNA_D-dudresnayi_contig9999.28809.1 vs. uniprot
Match: A0A0G4IS92_PLABS (Vesicle-fusing ATPase n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IS92_PLABS)

HSP 1 Score: 250 bits (639), Expect = 1.770e-74
Identity = 133/253 (52.57%), Postives = 186/253 (73.52%), Query Frame = 1
Query:   10 QALGVSHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHERCVQMGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQILSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEVCMPIPLPDRTGREQILAIHLRKARDAGLVSPDVDDATLASKTVSFSGADLAGLVRSATSFAIADWRARRAMVENGEGGGAR----LLVTVDNFERAMLEV 756
            Q LG+SHVRG+LLHGPPG GKTL+AR++ + L  R PK+V+GPEIL+K+VG +E  +R LF DAE ++    Q GE      L+++ FDEIDA+C++RGS +G ++GV D+VVNQ+LSK+DG+ +L N+LV+GMTNRK+++DEALLRPGR+EV + I LPD  GR  IL IH +  RD+G + PDVD   LA+KT +FSGA++AGLV+SATSFA+         +++ +    R    +LV + +FE+A+LEV
Sbjct:  240 QKLGISHVRGMLLHGPPGTGKTLIARQIGKMLHGREPKVVNGPEILNKFVGASEENIRKLFEDAEADY---AQNGEHA---DLHIIIFDEIDAICKQRGS-TGSSTGVHDTVVNQLLSKIDGVNSLNNILVIGMTNRKDMIDEALLRPGRLEVHVEIGLPDENGRHDILMIHTKAMRDSGCLDPDVDLRVLAAKTKNFSGAEIAGLVKSATSFALYG----NVDIKSADSVAVRSTSDVLVKMAHFEQALLEV 481          
BLAST of mRNA_D-dudresnayi_contig9999.28809.1 vs. uniprot
Match: A0A7S2Y4D5_9STRA (Vesicle-fusing ATPase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y4D5_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.880e-74
Identity = 138/254 (54.33%), Postives = 179/254 (70.47%), Query Frame = 1
Query:   16 LGVSHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHERCVQMGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQILSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEVCMPIPLPDRTGREQILAIHLRKARDAGLVSPD-------VDDATLASKTVSFSGADLAGLVRSATSFAIADWRARRAMVENGEGGGARLLVTVDNFERAMLEV 756
            LG+SHV+G+LL GPPGCGKTLLAREL+R LGAR P++V+GPEILD+++GEAERKVR LF  AE E+      G+D A   L+++  DE+DA+ ++RGS+S DT+GVRDSVVNQ+LSKMDG+    NVLVVG+TNR ELLD ALLRPGR+EV + + LPD  GR  IL IH R  ++A  +S +       +DD  L   T  +SGA+LAGLVRSA SFA+A     RA+    + G     V V + ++A+ EV
Sbjct:    2 LGISHVKGILLSGPPGCGKTLLARELARLLGAREPQIVNGPEILDRFIGEAERKVRELFAPAEAEYRIS---GDDSA---LHIIILDEMDAIAKKRGSVSSDTTGVRDSVVNQLLSKMDGITQSTNVLVVGLTNRPELLDPALLRPGRLEVQLRVELPDAAGRRDILRIHTRAMKEADGISEEAVAWMENLDDKGLPVLTEHYSGAELAGLVRSAASFALA-----RALESQSDSG----KVDVSDLKQALREV 240          
BLAST of mRNA_D-dudresnayi_contig9999.28809.1 vs. uniprot
Match: A0A7S3QJ62_9STRA (Vesicle-fusing ATPase (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ62_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.540e-73
Identity = 140/261 (53.64%), Postives = 187/261 (71.65%), Query Frame = 1
Query:   16 LGVSHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHERCVQMGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQILSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEVCMPIPLPDRTGREQILAIHLRKARDAGLVSP-------DVDDATLASKTVSFSGADLAGLVRSATSFAIADWRARRAMVENGEGGGARLL-------VTVDNFERAMLEV 756
            LG+SHVRG+LL GPPGCGKTLLAREL+R LGAR P++V+GPEILDK++GEAE++VR LF+ AE+E+    Q+G++ A   L+++  DE+DA+ R+RGS +GD +GVRDSVVNQ+LSKMDG+    NVLVVG+TNR ELLD ALLRPGR+EV + + LPD  GR  IL IH R+ ++AG +S        D+ D  L S +  F+GA+LAGLVRSA S+A+A    R   V + E      +       ++V +FE+A+LEV
Sbjct:  369 LGISHVRGILLSGPPGCGKTLLARELARLLGAREPQIVNGPEILDKFIGEAEKRVRQLFVPAEMEY---AQVGDESA---LHIIILDEMDAIARKRGSSAGDNTGVRDSVVNQLLSKMDGVKQSNNVLVVGLTNRPELLDPALLRPGRLEVQLRVELPDLKGRRDILRIHTRQMKEAGGLSKAAEDLLEDLGDKGLPSSSDKFTGAELAGLVRSAASYALA----RSVNVLSSENDDLESILDSDEGKISVADFEQALLEV 619          
BLAST of mRNA_D-dudresnayi_contig9999.28809.1 vs. uniprot
Match: A0A7S4B1L9_CHRCT (Vesicle-fusing ATPase n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B1L9_CHRCT)

HSP 1 Score: 239 bits (610), Expect = 4.130e-73
Identity = 139/289 (48.10%), Postives = 183/289 (63.32%), Query Frame = 1
Query:    4 LRQALGVSHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHERCVQMGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQILSKMDGLVNLQNVLVVGMTNRKELLDEALLRPGRMEVCMPIPLPDRTGREQILAIHLRKARDAGLVSPD----VDDATLASKTVSFSGADLAGLVRSATSFAI-------------------ADWRARRAMVENGEGGGARLLVTVDNFERAMLEVGMTSGGGGRGRLGML 801
            L + LG+S V+G+LL+GPPGCGKTLLARE+S  LGAR PK+V+GPE+++K+VGE+E  VR LF +AELE    ++ G+  A   L+++  DE+DA CR RG+L GDTSG+RDSVVNQ+L+K+DG+  L N+LV+G+TNR EL+D ALLRPGR+EV + + LPD  GR+ IL IH RK R  G         +    LA  T  +SGA LAGL+RSATSFA+                   A+ RA     E   G G +L     +   A  E G+  G GG G  G+L
Sbjct:  116 LTRELGLSPVKGMLLYGPPGCGKTLLAREISAALGAREPKIVNGPEMMNKYVGESESFVRALFAEAELEQ---MEAGDQSA---LHIIVLDELDAFCRERGALRGDTSGIRDSVVNQLLAKLDGVEELNNILVIGLTNRPELIDAALLRPGRLEVHVKVDLPDEAGRQTILGIHSRKLRQRGCFDAAALAAIGGGALAKSTFGYSGAQLAGLLRSATSFALERYTDAALLRGWVPGDAKQAERRASGRAAEGRHGKGVKL-----SGASAASEAGVDGGEGGLGDDGLL 393          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9999.28809.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LEA1_9PHAE6.630e-13979.64Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836CBN6_9STRA2.580e-9451.39Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2EHK2_TRICV2.400e-7955.86Vesicle-fusing ATPase (Fragment) n=1 Tax=Trieres c... [more]
A0A7S0Z2V3_9CRYP2.210e-7855.94Vesicle-fusing ATPase (Fragment) n=1 Tax=Hemiselmi... [more]
A0A267F858_9PLAT5.000e-7560.56Vesicle-fusing ATPase (Fragment) n=1 Tax=Macrostom... [more]
A0A7S2M5J1_9STRA7.440e-7554.72Vesicle-fusing ATPase n=1 Tax=Skeletonema marinoi ... [more]
A0A0G4IS92_PLABS1.770e-7452.57Vesicle-fusing ATPase n=2 Tax=Plasmodiophora brass... [more]
A0A7S2Y4D5_9STRA1.880e-7454.33Vesicle-fusing ATPase n=1 Tax=Amphiprora paludosa ... [more]
A0A7S3QJ62_9STRA1.540e-7353.64Vesicle-fusing ATPase (Fragment) n=1 Tax=Chaetocer... [more]
A0A7S4B1L9_CHRCT4.130e-7348.10Vesicle-fusing ATPase n=2 Tax=Chrysotila carterae ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9999contigD-dudresnayi_contig9999:5223..11214 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score442.6
Seed ortholog evalue1.3e-121
Seed eggNOG ortholog2880.D8LSL6
KEGG koko:K06027
KEGG TC1.F.1.1
KEGG Pathwayko04138,ko04721,ko04727,ko04962,map04138,map04721,map04727,map04962
GOsGO:0000166,GO:0000502,GO:0000731,GO:0002020,GO:0002082,GO:0002790,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0005829,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006281,GO:0006301,GO:0006302,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006511,GO:0006515,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006897,GO:0006909,GO:0006914,GO:0006919,GO:0006928,GO:0006950,GO:0006974,GO:0007034,GO:0007041,GO:0008047,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009109,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009306,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010918,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016192,GO:0016197,GO:0016236,GO:0016462,GO:0016504,GO:0016567,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0018130,GO:0018193,GO:0018196,GO:0018279,GO:0019058,GO:0019079,GO:0019219,GO:0019220,GO:0019222,GO:0019362,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019899,GO:0019902,GO:0019903,GO:0019904,GO:0019941,GO:0019985,GO:0022411,GO:0022607,GO:0023051,GO:0023056,GO:0030111,GO:0030162,GO:0030163,GO:0030177,GO:0030234,GO:0030433,GO:0030554,GO:0030808,GO:0030810,GO:0030970,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031399,GO:0031401,GO:0031593,GO:0031625,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032509,GO:0032510,GO:0032527,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032984,GO:0032991,GO:0033036,GO:0033554,GO:0034098,GO:0034214,GO:0034404,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034976,GO:0035639,GO:0035800,GO:0035861,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0036435,GO:0036503,GO:0036513,GO:0040011,GO:0042175,GO:0042176,GO:0042221,GO:0042287,GO:0042288,GO:0042325,GO:0042327,GO:0042391,GO:0042726,GO:0042728,GO:0042802,GO:0042886,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043280,GO:0043281,GO:0043412,GO:0043413,GO:0043457,GO:0043467,GO:0043531,GO:0043632,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044389,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0045732,GO:0045838,GO:0045862,GO:0045935,GO:0045937,GO:0045981,GO:0046034,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046903,GO:0046907,GO:0048193,GO:0048471,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048870,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051186,GO:0051187,GO:0051234,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051336,GO:0051345,GO:0051603,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0051788,GO:0051881,GO:0052547,GO:0052548,GO:0055086,GO:0060255,GO:0060828,GO:0061134,GO:0061136,GO:0061857,GO:0061919,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070085,GO:0070647,GO:0070727,GO:0070841,GO:0070842,GO:0070887,GO:0071218,GO:0071310,GO:0071702,GO:0071704,GO:0071705,GO:0071712,GO:0071840,GO:0071897,GO:0071985,GO:0072387,GO:0072389,GO:0072521,GO:0072524,GO:0080090,GO:0090085,GO:0090263,GO:0090304,GO:0090734,GO:0097159,GO:0097352,GO:0097367,GO:0098657,GO:0098772,GO:0098796,GO:0098827,GO:0140030,GO:1900371,GO:1900373,GO:1900542,GO:1900544,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1901800,GO:1902494,GO:1903003,GO:1903004,GO:1903006,GO:1903007,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903513,GO:1903578,GO:1903580,GO:1903715,GO:1903862,GO:1904288,GO:1904949,GO:1905368,GO:1905369,GO:1990381,GO:1990730,GO:2000058,GO:2000060,GO:2000116,GO:2000152,GO:2000158,GO:2001056,GO:2001169,GO:2001171
EggNOG free text desc.SNARE complex disassembly
EggNOG OGsCOG0464@1,KOG0741@2759
EC3.6.4.6
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Hectar predicted targeting categoryother localisation
Exons6
Model size816
Cds size816
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9999.28809.1prot_D-dudresnayi_contig9999.28809.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9999 5223..11214 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930964.4287-CDS-D-dudresnayi_contig9999:5222..53481622930964.4287-CDS-D-dudresnayi_contig9999:5222..5348Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9999 5223..5348 -
1690557982.0913515-CDS-D-dudresnayi_contig9999:5222..53481690557982.0913515-CDS-D-dudresnayi_contig9999:5222..5348Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9999 5223..5348 -
1622930964.4495504-CDS-D-dudresnayi_contig9999:5495..57201622930964.4495504-CDS-D-dudresnayi_contig9999:5495..5720Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9999 5496..5720 -
1690557982.113377-CDS-D-dudresnayi_contig9999:5495..57201690557982.113377-CDS-D-dudresnayi_contig9999:5495..5720Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9999 5496..5720 -
1622930964.4698007-CDS-D-dudresnayi_contig9999:6862..69731622930964.4698007-CDS-D-dudresnayi_contig9999:6862..6973Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9999 6863..6973 -
1690557982.1283128-CDS-D-dudresnayi_contig9999:6862..69731690557982.1283128-CDS-D-dudresnayi_contig9999:6862..6973Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9999 6863..6973 -
1622930964.4886963-CDS-D-dudresnayi_contig9999:8451..85871622930964.4886963-CDS-D-dudresnayi_contig9999:8451..8587Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9999 8452..8587 -
1690557982.1366353-CDS-D-dudresnayi_contig9999:8451..85871690557982.1366353-CDS-D-dudresnayi_contig9999:8451..8587Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9999 8452..8587 -
1622930964.5097625-CDS-D-dudresnayi_contig9999:10025..100901622930964.5097625-CDS-D-dudresnayi_contig9999:10025..10090Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9999 10026..10090 -
1690557982.1449065-CDS-D-dudresnayi_contig9999:10025..100901690557982.1449065-CDS-D-dudresnayi_contig9999:10025..10090Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9999 10026..10090 -
1622930964.5318317-CDS-D-dudresnayi_contig9999:11061..112141622930964.5318317-CDS-D-dudresnayi_contig9999:11061..11214Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9999 11062..11214 -
1690557982.153567-CDS-D-dudresnayi_contig9999:11061..112141690557982.153567-CDS-D-dudresnayi_contig9999:11061..11214Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9999 11062..11214 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9999.28809.1

>prot_D-dudresnayi_contig9999.28809.1 ID=prot_D-dudresnayi_contig9999.28809.1|Name=mRNA_D-dudresnayi_contig9999.28809.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=272bp
QLRQALGVSHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILD
KWVGEAERKVRLLFLDAELEHERCVQMGEDPAGLPLNLVCFDEIDALCRR
RGSLSGDTSGVRDSVVNQILSKMDGLVNLQNVLVVGMTNRKELLDEALLR
PGRMEVCMPIPLPDRTGREQILAIHLRKARDAGLVSPDVDDATLASKTVS
FSGADLAGLVRSATSFAIADWRARRAMVENGEGGGARLLVTVDNFERAML
EVGMTSGGGGRGRLGMLGGRLR
back to top

mRNA from alignment at D-dudresnayi_contig9999:5223..11214-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9999.28809.1 ID=mRNA_D-dudresnayi_contig9999.28809.1|Name=mRNA_D-dudresnayi_contig9999.28809.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=5992bp|location=Sequence derived from alignment at D-dudresnayi_contig9999:5223..11214- (Desmarestia dudresnayi DdudBR16 monoicous)
CAGCTGCGGCAAGCCTTGGGCGTGAGTCACGTCCGCGGATTGTTGCTACA TGGCCCACCAGGGTGTGGCAAGACGTTGCTGGCGAGGGAACTCAGCCGAC GCCTGGGAGCGCGACCCCCAAAGCTTGTCAGTGGACCAGAAATCCTGGAC AAGGTGCAACAGCAGACAGTAGTAGTGTGTTATGCCATGCCGTGTTGTGA TAATATGTATTTTCGGGTTGCAAGGAAAACATGGGATTTTTTTTCTTTTC TTATTTGCCGCGTGCGATAAGGGATTGAAAACATTTTCCCCTGCTGGGTC TTCTTATCCACACACCGCGCCGCGATGGCTGCGTGATACACACGGTGAAA GGGGGAAGCAGGAGAAATCCACCGTTCAGTGCGTGTCTACCTTGCTCCAA AACTTACTCGCAAACAAGACAAGGCTGTAGTAGTAGTAGTGGCGTGGTGC TATGCATCAACCGTCCGTGCGTAACGGTGTGGTGGCGGACTTGTGTACTG TGATAGACACGAAGCGGCGGGCTATTGCAGAAAATTGGGAACAAAGAGGG TGGAGACGTATCCTCCCCACCCCCTCCTACGTATTACCGGTGGCCACAAA AGGCGAAACAGGAAGGGGATAAGCTACGCAAAAAGTTTTTTTATGTCAGA TACGGCAAAAATGTAAAGAGCGTCCAAGTGTTGGAGGTGTTTCCATTAGG AGTAGGAACGGTGCTCTCTCCGTCTCGAAAGTGATGCGTGGTCAATGGCC AAATTATTAAGGCAAGAAAATAAATGAGAAGGCCCTCTCCCCCCCCCCCC TGACCATTGCGGGGACTCAATATGATCACATGTTTATACAAGACAGCGTT GTTGTAAGCTCTTGTTGAGAACGTCGTCGTCGCATGAAACTTGCACCTTC TATTGTCTTATGTATCTGCCTCCTCTCCGATCCGAAGAGGGACGCGTGGT CGATTATCCAAGGAATGGATAACGCGAGCACGAGCACGCCCTCTCACTCT TACCCACCCCCCCCCCTCCCCTCCCGCCCCTCCATATATTTCTCCCCCGC GATCTGTTCGCTGTTGCGGTCTTTTTTTGTTTTTGTTTTTTTTGTTTTTT TGTGTATTTGTACTTTTGCTGCAGTGGGTGGGTGAGGCCGAGCGGAAGGT GCGGCTGCTCTTTCTCGACGCAGAGCTTGAGCATGAGAGGTGAGAAACCA ACAGAAAGTAATTGAAGAGTAATTATTGCCTTATTCAGTGTCTTGCAGGT GGATTAGGTGTGTGCCGTACCGCGGGCCCTGGTACACATGCATACCACGG CTTTTTTTTTTTCCAACCCCATTTATTATCGTCCCCCTTTTCTTTTTCCA GGTCCATCTCATCTCCGTAACTCAGATCGGGGTCACATAGCAGGCGCTCC TCCCACCTCGCTGTTGGTATTGTCGAAGATATCTTTGTTCCGTCAACGAC GGACGACGCGAGCTCCTCCCTTGCAGTCAGTCAGTGATGCTCTCACTCTG CTGCAAGTCACGTCTCACAAGACAATGCTTTTATTACCATTGCATTAACT TGATTTACTGTTACTGCTTGCTTCCTCTTGAGAGGCACGTCTTGGTGTAG ATGAGGAGTGAGCGGGGCGGGGCTCTTGCATTCTCTACTATCCCTCTTGT GGCTGTCTTCTAGACTCGACTCGTAATATCTAGAAGATCTTACCCAATTA TGTATCGTTCCGTAGAACGTTCATCTTTTACACTCTTTCCAGAACAGAAT CTTCTGGAAATATGGCATCGTAAGTTCCGGTTCGCATGAAACTGCTATAC AGTTACACATGTAGTATTTAACTAGTACCTATGATAGTACTCTATACTCT GTACTCTGCACTGCTACTGTGCACTGTACCTCTGTATTCGTATGTACTAC TAGTGCTACTTTTATGTGCAGCTCCATCATAGAACGCTTGCAAAGCACAC ACTTTAGCACTCCCCACTACGGTATGGGCCTACGTTTTTACCACGAGAGA GGTGCAGCACTTTTTCCGCTGGTCGAGTTTCATCGAATTGCAATGCTGTA TGATAACTATAATACCTTGTGCCGCGAAGAAGTGGCAAAACATGCTAAAC ATGGTGCTGAAGCACGTGTGATGGCGGTATTATCTGCATCTCTGGTGTGA TAGATGATGATGTATGGTTTAAACACCAAGACAATATAAAAGGAGGCTAC GGTTTAAACACCAAGACAAGTGCCGCAAGAGACACAGGCAGGCTACCACT AGTACGGCATCGAGCGCAGCAGGAAATATCGGAACCGACGGTGTTGCGAG CGGTAGGGTAGGATAATAGAGGAATCGACAATGGCGGAGATTTGTACGTG TACGCCACCGATACCTACGTACCTAGCCGTGATCCATGCCGACGCGTACA CCCCGCGACGGACAGAGCACTTGCAGTGCAGGGACGCAACTTGGTTCAAT TGTTGTTGTTGGTTGGTTGCTGCCATATATGACCATGCCTGCTTCTGGAA TTTCCAGCCTTGGTGTCTTCCACACGAGGAGTTTTTAGACTCTACGAAAA TATCCGCCCCGGCCCTGTGTTTGCCGTTACTATAATACTACTGTACTGTT GTTGCTGTTTGTTGTTGTGCTTTAAAGGTGTGTCCAGATGGGAGAAGACC CCGCCGGGTTGCCGCTCAACCTGGTGTGTTTCGACGAGATCGATGCTCTC TGCAGGAGGAGAGGCTCTTTGTCCGGCGATACTTCTGGTGTCAGGGACAG CGTCGTCAATCAGGCGAGACCGTCTCACCCTACCAACAAGGATTTTCGTT TGTGTTTGTTTGTGTGTTTGCTTGTTTGTTTGTTTGCTTGGTTGTTTATT TATCATATTTTCTCTTGCCATCTGACTAAGTACGGCTCACGATTCAACCC GATATCGCTCGAGTATTTTATAAACAGCAGCAGCAGCAGCAGTATCCCCT ATATATCACTGACTCCTTTCCCCCTTAATTTAGTTATTGTGTTATTAGAG TTGTTCGTTTTTTAGGCCAGGCTGTCACGGCACCTGATTGAACCCATGCT GTTGATGGATTGTACGCGCTTTCCGCGACTTAAGAAAGAAAGACAACGCA AACACACAAAATGTAGTTTTTTTCGGGATTCGAACCACCAGCTAGGACGG TTTGAGTCACCACCAGTTGAACCGCTGGTGCGCAAGACGAGAAGCAAAAG AAAAAAGTTCCAAAAACATAAATACGACGATAAAACATAAAACCAGAGTG TTGGAGAAGAACAATATGAAGACGAACAGACTTTCCGAGGGGGTAGGTGA TGCGGTAAAATCTCCAACTTTAGATGGCCGACAAACGGGGAGATTGAAGT GTTCAACCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCTCCCGCGGCCCTGTGTTTTGACTAGTCTCCGCCC TTTATTTTTTTTTNNNNNNNNNNAAGAACACCGAAAGACTTTCCGAGGGG GGAAGGGATGCGGGAAAAACCCCAACCTTAAGTGGCCGACAAAAGGGGAG ATTGAAGTGTTCAACCCCCCCCCCCCCCCCCCCCCCCGCCTCCCCCGATG TCGTTCCTTCAGCACGCCTCGTACGTGGAAGTATTTTCAATAGACTTTAC AACGTGTTTATTTATTTATTAATTTTTTTTCTTACTGTTACTGTGGTGTG GCTACGGTTGGGGTTGGTTCTAGAAAATATTCCGAACTGCTGAACAGCCC ACGTTGGTACTATAATACTAGTATAATAAAACGAGCGTCCTAAATATCCT CGAACAACCATTATTGTAGAGGAGTACGGCTGTACCGGTATGAGATACGC CGCACTCGCCACTATGATATCCCCTTGCGATCATTAGGTAGATTGCCGGC ACTCCCGGTCTCCTTCGCGCATTGAGGGCAGCGACGAAGTGGCCGCCCAA TTTCACTTTCCCGTCAAGGTCCCCCCGATTGATGATTGATATCATGACAA GCCCTTGGAGGAGGCTTTTTGCCTTATTTGTTGTCGAAAAATGGGAGGGA GAAAAAACCGCGTCGATGCTGTCGGCGTTGTTGGCCTTGCTGTGGTATCA TGACGAACTATGTTGTATAGGTAACTTTTGTCTGTATGTAACACTTTTTG TTGTTGTTGTTGTTGCTGTTCTTGTTGTTGTTGGTTTTTTTTTCCCTGCT GCTTTTTCTCTGCCGCTGCTGCTGCTGCTACAACGGATCAGATCTTGAGC AAGATGGACGGCCTCGTGAACCTGCAGAACGTTTTGGTGGTGGGCATGAC GAACAGGAAGGAGCTCCTAGACGAGGCGTTACTAAGACCGGGGAGAATGG AGGTATGAAGACTGTGCATTTCGATCTGCCTTACGTTTGTGGAGAACATA TGCCCCCTTCTGTCTGTTGCATGTGTCCGAAAGGTAGCTGAGGTAGCAGC ACGAATACGCACCCACAAACACACACTATACACACACTACACGCACACAC ATGCTGTCCTTGGAAATTTGTCCTGTCCCGCGTGCAGACGGTTCCGCTGC TGTCGTGTTACGTCAGGCGGTTTTGCGCCAGGCAGTTGTTTTCGTTCGTC CGTACAACTGCAGAGCTCTCTCTCTCTTTCTCTCTCTCTCTGTATAATAT TTGCGTTGATACCGTATTCTGTACGTTTTTTTTTTATTTTTTGTTTTTCG CAGTTGTTGTTATGGACACAATTTAGCTGTCAGTGTGAGATGTGCTGTAT AGTCTAGCTGTATATGCTCGGAGTTTGTTTTTTTCTTCTCTTTAAGTGGC ATGTTCAGATTTTGCATCATCAACAGAACAAAGGTTTTCCCCAACCCCGA CATTATGTTTTCTCGGCTTTTCCCGACAGAGTGCTACTAGTATTATTACA CGAATTATGAGATAGTCTCCACCACCCCCCCCCCCCCCAGCTCAGCTTAC AAGAAGAGCTCATCGCTCAATGGTATTCTGTGCAAGCTGTGCCTACAGGT GTCTCCCCCCCCCCCTCCCTAACTCCGAATATTTGCCTTGAGTTGTTATC GCAAGTAGGGTTCGGCATTCCCGCAGCTCGCCGACTTTCATAGAGTGTAC ACGGTGGTGGCATGTTACCTTGTATTTTTACACTTAAAATATGGACTTGG TGGTGATTAGTCCGCCGGCTCCATGCATCGTCCGGACGACCTATAATAAA TTCGCTGGTGGCCACCGCCATCAAAAGGTTGATTGATTGATGATTGGTAG CCGCGGGGTCTGACGATGTTGCTCGGCGGCTGCGCAAAGCGAGCAGCAGC ATGCCGATACTACTTTTGTACCGGATCCGATACGAGGAACCGTAATGCCT CGTTCTTTCATCGAAACCCCGCGAACCGTACAACAGTAGTAGCTGTAACC CCTTTCCCCCCCGTCCCCGCCCCCGCCCCGGCCCCCGCCCCCGCCCGCCC TCGCCCGCCCCCAAATAATCTCGAATATATACCACTAATTCCAGGTGTGC ATGCCTATCCCTCTGCCGGATCGGACGGGTAGAGAGCAGATTCTGGCGAT ACACCTGCGCAAAGCCAGAGATGCGGGGCTCGTGTCCCCTGACGTGGACG ACGCCACTCTCGCTAGTAAAACTGTTTCGTTTAGCGGAGCAGACTTGGCG GGGCTCGTGCGTTCCGCCACGAGCTTCGCGATTGCCGACTGGCGGGCACG ACGGGCAATGGTGGAAAATGTTGTCGCTGGCGTGCCGGTGCAGTCGATGC AGGTGCCGTCGTCGGAATGGTTAGTGGTCGATGGACAAGATAGGGAGACG GTTCCACTGAAGATTGATGGTATCGAGGGTGGTGGTGGTGTTGGTGTTGG TGGTAGGGAAGGGGAGGGGGAAGGAGGGGGCGCTAGGCTTTTGGTCACTG TTGATAATTTTGAGAGGGCGATGTTAGAGGTGGGGATGACCAGTGGGGGA GGAGGAAGGGGGAGGCTTGGGATGTTGGGCGGTCGTCTTCGG
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig9999:5223..11214-

>mRNA_D-dudresnayi_contig9999.28809.1 ID=mRNA_D-dudresnayi_contig9999.28809.1|Name=mRNA_D-dudresnayi_contig9999.28809.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1632bp|location=Sequence derived from alignment at D-dudresnayi_contig9999:5223..11214- (Desmarestia dudresnayi DdudBR16 monoicous)
CAGCTGCGGCAAGCCTTGGGCGTGAGTCACGTCCGCGGATTGTTGCTACA
TGGCCCACCAGGGTGTGGCAAGACGTTGCTGGCGAGGGAACTCAGCCGAC
GCCTGGGAGCGCGACCCCCAAAGCTTGTCAGTGGACCAGAAATCCTGGAC
AAGCAGCTGCGGCAAGCCTTGGGCGTGAGTCACGTCCGCGGATTGTTGCT
ACATGGCCCACCAGGGTGTGGCAAGACGTTGCTGGCGAGGGAACTCAGCC
GACGCCTGGGAGCGCGACCCCCAAAGCTTGTCAGTGGACCAGAAATCCTG
GACAAGTGGGTGGGTGAGGCCGAGCGGAAGGTGCGGCTGCTCTTTCTCGA
CGCAGAGCTTGAGCATGAGAGTGGGTGGGTGAGGCCGAGCGGAAGGTGCG
GCTGCTCTTTCTCGACGCAGAGCTTGAGCATGAGAGGTGTGTCCAGATGG
GAGAAGACCCCGCCGGGTTGCCGCTCAACCTGGTGTGTTTCGACGAGATC
GATGCTCTCTGCAGGAGGAGAGGCTCTTTGTCCGGCGATACTTCTGGTGT
CAGGGACAGCGTCGTCAATCAGGTGTGTCCAGATGGGAGAAGACCCCGCC
GGGTTGCCGCTCAACCTGGTGTGTTTCGACGAGATCGATGCTCTCTGCAG
GAGGAGAGGCTCTTTGTCCGGCGATACTTCTGGTGTCAGGGACAGCGTCG
TCAATCAGATCTTGAGCAAGATGGACGGCCTCGTGAACCTGCAGAACGTT
TTGGTGGTGGGCATGACGAACAGGAAGGAGCTCCTAGACGAGGCGTTACT
AAGACCGGGGAGAATGGAGATCTTGAGCAAGATGGACGGCCTCGTGAACC
TGCAGAACGTTTTGGTGGTGGGCATGACGAACAGGAAGGAGCTCCTAGAC
GAGGCGTTACTAAGACCGGGGAGAATGGAGGTGTGCATGCCTATCCCTCT
GCCGGATCGGACGGGTAGAGAGCAGATTCTGGCGATACACCTGCGCAAAG
CCAGAGATGCGGGGCTCGTGTCCCCTGACGTGGACGACGCCACTCTCGCT
AGTAAAACTGTTTCGTTTAGCGGAGCAGACTTGGCGGGGCTCGTGCGTTC
CGCCACGAGCTTCGCGATTGCCGACTGGCGGGCACGACGGGCAATGGTGG
AAAATGTGTGCATGCCTATCCCTCTGCCGGATCGGACGGGTAGAGAGCAG
ATTCTGGCGATACACCTGCGCAAAGCCAGAGATGCGGGGCTCGTGTCCCC
TGACGTGGACGACGCCACTCTCGCTAGTAAAACTGTTTCGTTTAGCGGAG
CAGACTTGGCGGGGCTCGTGCGTTCCGCCACGAGCTTCGCGATTGCCGAC
TGGCGGGCACGACGGGCAATGGTGGAAAATGGGGAAGGAGGGGGCGCTAG
GCTTTTGGTCACTGTTGATAATTTTGAGAGGGCGATGTTAGAGGTGGGGA
TGACCAGTGGGGGAGGAGGAAGGGGGAGGCTTGGGATGTTGGGCGGTCGT
CTTCGGGGGGAAGGAGGGGGCGCTAGGCTTTTGGTCACTGTTGATAATTT
TGAGAGGGCGATGTTAGAGGTGGGGATGACCAGTGGGGGAGGAGGAAGGG
GGAGGCTTGGGATGTTGGGCGGTCGTCTTCGG
back to top