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Homology
BLAST of mRNA_D-dudresnayi_contig9968.28774.1 vs. uniprot
Match: A0A6H5JWV5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWV5_9PHAE) HSP 1 Score: 286 bits (732), Expect = 3.470e-94 Identity = 145/170 (85.29%), Postives = 151/170 (88.82%), Query Frame = 2
Query: 44 MTVNVPWSTLRPNPRDQRERAAANEGLVGEGVRNTTKDPEAEIAWDVGDFGKRMAFGGIVGGVTGITFGAMDGHRAIRNDSMGRFPTTALKTKEFMRLTALSGTIFTGFFCTYQGIKYGARLARKEDDFWNVLIASAGSIAPMSTVPAMRSRFPYAVILIAMDTLNNHVL 553
MTVNVPWSTLRPNPRDQRERAAA E G KD E EIAWDV DFGKRMAFGGIVGGVTGITFGAMDGHRAIR+DSMG+FPTTALKTKEF RLTALSGTIFTGFFCTYQG+KYGA+LARKEDDFWNVLIASAGS APM VPAMRSR+PYA ILIAMDTLNNH+L
Sbjct: 1 MTVNVPWSTLRPNPRDQRERAAA-EFPGGGKAPPLDKDGEPEIAWDVTDFGKRMAFGGIVGGVTGITFGAMDGHRAIRDDSMGKFPTTALKTKEFTRLTALSGTIFTGFFCTYQGMKYGAKLARKEDDFWNVLIASAGSFAPMLVVPAMRSRYPYAAILIAMDTLNNHIL 169
BLAST of mRNA_D-dudresnayi_contig9968.28774.1 vs. uniprot
Match: A0A835YQU0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU0_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.460e-40 Identity = 81/172 (47.09%), Postives = 107/172 (62.21%), Query Frame = 2
Query: 50 VNVPWSTLRPNPRDQRERAAANEGLVGEGVRNTTKDPEAEIAW----DVGDFGKRMAFGGIVGGVTGITFGAMDGHRAIRNDSMGRFPTTALKTKEFMRLTALSGTIFTGFFCTYQGIKYGARLARKEDDFWNVLIASAGSIAPMSTVPAMRSRFPYAVILIAMDTLNNHVL 553
VNVPW LR NPR +R+R + E + PE++ + D+G +++ FG GGVTGI FG MD HR I G+F T A K KE R+TA +GT+F G+F YQGIKYG + R ED F+NV +A+A SIAP+ PA+R+R PY L+A+DTLN+HVL
Sbjct: 6 VNVPWRELRHNPRTERDR-------LSEAELSDESKPESDATFMDRFDMGMMNRKLIFGVACGGVTGIMFGLMDSHRVI--SKTGQFFTLAAKVKETTRMTAFTGTVFGGYFAAYQGIKYGIQAYRGEDTFFNVFMATAISIAPVVPFPALRARLPYMAFLVAIDTLNSHVL 168
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 89.7 |
| Seed ortholog evalue | 1.4e-15 |
| Seed eggNOG ortholog | 65071.PYU1_T013902 |
| EggNOG free text desc. | function. Source PGD |
| EggNOG OGs | 1MGYM@121069,2DR8T@1,2S6DK@2759 |
| COG Functional cat. | S |
| Best tax level | Pythiales |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-27_003320.1 |
| Exons | 4 |
| Model size | 1024 |
| Cds size | 513 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930959.157137-UTR-D-dudresnayi_contig9968:1588..2056 | 1622930959.157137-UTR-D-dudresnayi_contig9968:1588..2056 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig9968 1589..2056 - |
| 1690557980.2962425-UTR-D-dudresnayi_contig9968:1588..2056 | 1690557980.2962425-UTR-D-dudresnayi_contig9968:1588..2056 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig9968 1589..2056 - |
| 1622930959.2769048-UTR-D-dudresnayi_contig9968:6712..6755 | 1622930959.2769048-UTR-D-dudresnayi_contig9968:6712..6755 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig9968 6713..6755 - |
| 1690557980.3614087-UTR-D-dudresnayi_contig9968:6712..6755 | 1690557980.3614087-UTR-D-dudresnayi_contig9968:6712..6755 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig9968 6713..6755 - |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9968.28774.1 >prot_D-dudresnayi_contig9968.28774.1 ID=prot_D-dudresnayi_contig9968.28774.1|Name=mRNA_D-dudresnayi_contig9968.28774.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=171bp
MTVNVPWSTLRPNPRDQRERAAANEGLVGEGVRNTTKDPEAEIAWDVGDF
GKRMAFGGIVGGVTGITFGAMDGHRAIRNDSMGRFPTTALKTKEFMRLTA
LSGTIFTGFFCTYQGIKYGARLARKEDDFWNVLIASAGSIAPMSTVPAMR
SRFPYAVILIAMDTLNNHVL* back to topmRNA from alignment at D-dudresnayi_contig9968:1589..6755- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-dudresnayi_contig9968.28774.1 ID=mRNA_D-dudresnayi_contig9968.28774.1|Name=mRNA_D-dudresnayi_contig9968.28774.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=5167bp|location=Sequence derived from alignment at D-dudresnayi_contig9968:1589..6755- (Desmarestia dudresnayi DdudBR16 monoicous)
GTCTGCTGTGCTGTGCGACATTGTGTGCTGTGCGGCAGCAGGGATGACGG
TGAACGTACCATGGTCTACGCTTCGACCCAACCCACGAGATCAGCGTGAG
AGAGCTGCTGCTAATGAAGGGCTTGTAGGAGAAGGCGTAAGGAATACAAC
GAAGGATCCCGAGGCGGAAATCGCATGGGATGTTGGCGACTTTGGCAAGC
GCATGGCCTTCGGAGGCATTGTGAGCTAAAAGTATTTTATCAAACGACAC
GATTGATACCACTCGTACTATAATAGTACGAGTACTTCTATGATATACTG
TACTAACTACTGTAAAGGAGTTAGTACCCTGAGCTAATCCGGCGTAAAAG
GTTAACCATTTACCCTGCTCATGGTAGTCCTTATAACAGTCTCCCCCCCC
TGAAGTAGAGGTGTTACCAGCGATATATTCTCACGCCTCGCCCACGGCTC
CGCAGGATAGTGCTTTTTCAACATACAAGTTCGATGATTTTCCCCCATTT
GTTCGGAAAAAATATTGTGCAGGGAGGGGATTCGAACCCAGGTCCCAGGT
CCAAACTGACGCCATTTGTAAAGGAGTTACTGCCTGTTGTTGTAGTACCC
TGAGCTAAACCGGCGTAAAAGGTTAGCCATTTACCCTGCTCATGGTAGTC
CTTATTCTTTTTACTTACAAAGACATCAGCCGTGACGTCCCAAACTGGTT
CCGGGGCCAGGGGATAAGCGTCAACCTCACTATAATATGTGATACATCCG
TCACGCGGATTCTATCGGTCCTCAGATAAGTTATAACGCAGTGGCTCCCC
TGGGGTGTCCAGGCTCTACAGGATAATTTTGGGAAACAGGCCCCATCATC
GTGTGCACTGGATCATAATCTTTCGGAGGGGGACGGGAAGTAACTGTGCA
TGTGTGGTATTTTCACATCATGTGTACGTACCTGAACCTGTACTATGCGA
ATTCACACTTGCTACGCACACTAGGTACGAAGGCAACGACGTTGTCCATG
TCTCCAAATACACCAATACACTACAACACCAAACTTACATGACGTTATCG
GTTTCACCAATACACCAATGCTGTACCACAACACACTTACATCACATACA
ACTCCGAAGGTAACATGATCGGTGTCATCACCATAATTAAATCACATTAC
ATACAACTACGAGGAGACACCAAACAAAACCAAAATCGAAACAAAATCCG
AAACCCAACAGCGCCAAGTATTTCATACAATACTGTAAATTGGTGTATTG
GTGATACCGATAACGTCGTTGCCTTCGTATCTAGTGTGCGTAGTGAGTGT
GAATTCGCATAGTGTAGGTTCAGGTACGTACACATGATGTGAAAATGTCA
CACATGCGCAGTTACTTCCCGTCCCCCTCCGATAGATTATGATCCAGTGC
ACACGATGATGGGGCCTGTTTCCCAAAATTTTCCTGGAGAGCCTGGGACA
CCCCAGGGGAGCCACTGCGTTAATTTATCTGAGGACCGATAGAATCCACG
CGACCGATGTATCACACAGTGAGGTTGACGATTATCCCCTGGCCCCAAGT
TTGGAACGTCACGGCTGATGTCTTTGTAATAATAAAAATATGGTGTACAC
CAACAACATAATAGAATACTATTGATACTCTACTACAAACAAACAAGTAA
ACATAGGCAAACAAGCAACGAAAAGCACCAGTCAATGATTTAGCATTATT
ATTTTTATTTACGGTGGCATGAGTCACCAAACAGAAGCAAAATGACAACC
AAAACCCAAAACCCATCAGTGTCAAGTATGCGTACACATATTACAAATTT
TGGTAAACATCAACTACATAGGAGGTATTCTATCACAACAAATAATTGAA
CATAATCAACTTAGCAACGAAAAGCAGTATTTGCTGTAATATTATTATTT
CTCTACGGGATAATTTTTTTTGGGAAAGCAGGCCCCATCATCGCGTGCAC
TGGATTATCATTTTTCGGAGGGGGACCGGAAATAACTGTGCATGTGTGGG
ATATTTACATCATGTGTATGCACCTGAACCTATACTATGTCTATTCACAC
TTAATACGTACGCTAGATACGAACGCGACGATGTTATCGGTGTCACCAAC
ACACTGCCACAAACTTACACCACATACAACTCCGAAGGCAACATGTTATC
GGTATCACTACCACAATCAAAGCACATTCCATACGACTACGAATAGTATG
GCAATCAAATCACATTACATACAACTACGAATAGACACCAAACAACACAA
AACCAAAACCTGAAACCCAACAGCGTCAAGAATTTCATACTCAAATTACT
ACTGTCTGTTGTACTGTTATAGTCGGTCTCAGTACAACAACAGCAGTGAC
GAACAAGAGTGCAGTATACGTAGCACCGTTTTGTGCTGCTGCACTGTTGT
GGTTTGTGTTTCGTTTGTGATCCCTTGCCTTTTATGGTTTTGTTCGTTAT
ATGCATGTTGCAATGATGACGGTGCTACATGCTTCGCTCGCGGCTGTGTT
GGTCGAGAATGTGGAAGTTCAATCACAGGGACTCGACACCACCGTACCGT
CGCGTTGACCTCTCTCCCTCTCTCCCTCTCTCCCTCTCCGTCTTTCTCTC
TCTCTCTCTCCCCCTTGCTCGCTGGTTTTGCGGCGTGATTTTGTCTCTTC
GAGGTCGGCGGTGTTACGGGTATCACGTTCGGAGCAAGTGAGTACGTATA
CGAGTACAGTAGTATTGAGTATTGCAATGTGACGTGTATGATAGTGCAGT
ATTATACGATGTGTGATACTCGCAGTGTTGGACGTTGCGTGTCCACACGG
ATCTATCTACTGGAGTAGGGTACTCGTAGGGCAACCCCGTTTCGCGATGC
AGTGCTCGATATTTACTTGTTTAGACGGGATAACGGGGAACGGGGGGGCG
CGGACACGGCAGTCGAAGTCGTCGGCGGCCTGAATGGACTCGATCGCCCC
TCATCCCTCGTGTTGATGAGAAGGGTATCTCGTAATTCACAGTGGGGTTG
GGGTTAGGGTTGGGGTCAGTAGGACAAGTATCTCACGGTGGCCCCTAATA
AGTAGGACCGAAAAAAGGTGAAATGGGAGAACGTCTACCCTTCCCAATTA
TTATCTGGATGTTACCAATAAAAGCATCGATGGAAAGCCTGTGATCGACC
ACGTTGTTTAAACGAACCAGATCCGGGATTGACGCAGTAGTTCTTGTTTT
ACACGCGCCAATGTATATTTAGCCTTTAAAACCAAGTCAAAACGGTGCGA
TTTCCAGCCTTCCCAATTATTTTCTGAACATTGCAAATATAGCATCGATG
GAAATCCTGTGATCAACCGCGTTGCTTAAACGAATCGGATCCGGGATTGA
CGCAGTACTTCTTAAGATGCACGCGCCAACGTGGGTGTTTGGGGCTTATT
GTGGGCTATTTGTTAGGGGCCACCGTGGGATAGTCCAGCGCAGGATCAGG
GTTTCGCTGTTACGCAACTTCTCCTACTGTGGTATTGCTGTAAAATAGTT
GTATAGACCTCTGGTGTTCAGTACGAGTATCATACGGGTCCTTTCTTGCT
GCAGCTTAGGGCTGCGAGGCTGCACATCGTTTACTGTATACTATTAATTG
TGCATACCGTCTGCCGTCCCACGGCCTCCTCGAGCACACGCCGCGGTATG
ATCTGTCATCATGCCCGACAGCAAATAGTACGCCTGAGCACACCTCTCGT
TTAATATTATCACACGATATGATACAGCAGTGCCGGAATCGAAGTGGCGC
GCAACATATCCGCTGATTCCCACCACGCGTCCAGCTTCTGCCTACTATTG
TTGTACATTGTGATAATTTTGTCGATGACCCCAAACGTCGGCGTTATTCT
ACCGCGTTTTGTGACACGGCAGTGGACGGCCATAGAGCCATCCGCAATGA
CTCTATGGGCAGGTTCCCTACGACGGCCCTCAAGACAAAGGAGTTCATGC
GGCTGACCGCCTTGTCGGGCACTATATTCACAGGGTGAGGACTAGAAGCT
ATCATATTGGTATACTTGTTGAGATTGTCGGCACCCCCGTGCGGTGCGGG
TGTAACTCTTCATTTTTGTGTGGCAATGTTACCCACCACAGTAGTACGAA
CAGGTCATATGCACGGTGTGGTGGGTGTACACCACCCGATGACATGTTAT
CATACGCTAGCTGAGTGTATGCCACACCCCACAAATATTTCGCAATCCAT
GATGGGCATGGCGTTGCTCGCCGCATTCGCCATCGTCCAGTATGTGTCTT
GTGTTGCCCGTTTTAACAACATTTGACGAAGTTATTACAGCTCGTGTTTT
TCAGTTCTGCTGTAGCGTTACTTGGTTTTGTCGCACGAACCCCAGCCCTC
CAAAATTAGTGGCGCACACACGTTTCCGTACTTATCGGCCGAGCGCGCAA
GCATTCATTTCTCTGGCGTAAGGATGTGCTTGGCTCGATATTTTACGACC
ATTGAGCAGTGTACACATCCGTCCGTCTCCGTGTTCAACACCCGTCCGGC
CGCTCACAGGTTCTTCTGTACGTACCAGGGGATCAAGTACGGGGCAAGGT
TGGCTCGAAAAGAGGATGATTTCTGGAACGTTCTTATCGCGTCGGCAGGA
TCGATCGCTCCCATGTCGACAGTGCCGGCGATGCGGTCGCGATTCCCTTA
CGCTGTGATCCTCATAGCCATGGACACGCTTAACAACCACGTGTTATAGA
ACGTGCGTGCGGTTCGTGTTTTGTCATTTGCGGGTGTTGGTGTACATTCT
TGTGCGATAAAATCTAGTTGTGGTTTTAGCTCTGAAACCATTGCCGTTAA
ACGCGGGGAGGGCACACGAGAATACCGTTGTGTAGTGTCCGCTTCTGTTT
TTTCCAACAGCTCTATTTGGAGCAGTTAACCCGAGCTTATGTGTAGCGTT
GGACTCTAAGGCAAATGATTAAGTTATTCATGAGGTTGACTCGCTTTCTT
TCCGTGTATTTTTGAATATTTCGATGATTACCAACGGCCGTATGCTACCT
ACTGCCGGGTCGTTGTTGTGCATGACCGGACCACAACGACAGTGGGCGTG
GAGCACAGCAAAGAGGGGCATGCTGCAAAGGTCGCGTCTCTGGGAAGGTG
GCAACTTTTTTGTTGTTTATCCTCCGGCGGATGGGTAAAAATTAAAAATG
AAACTTGTTTAATCCTC back to topCoding sequence (CDS) from alignment at D-dudresnayi_contig9968:1589..6755- >mRNA_D-dudresnayi_contig9968.28774.1 ID=mRNA_D-dudresnayi_contig9968.28774.1|Name=mRNA_D-dudresnayi_contig9968.28774.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1026bp|location=Sequence derived from alignment at D-dudresnayi_contig9968:1589..6755- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGACGGTGAACGTACCATGGTCTACGCTTCGACCCAACCCACGAGATCA
GCGTGAGAGAGCTGCTGCTAATGAAGGGCTTGTAGGAGAAGGCGTAAGGA
ATACAACGAAGGATCCCGAGGCGGAAATCGCATGGGATGTTGGCGACTTT
GGCAAGCGCATGGCCTTCGGAGGCATTATGACGGTGAACGTACCATGGTC
TACGCTTCGACCCAACCCACGAGATCAGCGTGAGAGAGCTGCTGCTAATG
AAGGGCTTGTAGGAGAAGGCGTAAGGAATACAACGAAGGATCCCGAGGCG
GAAATCGCATGGGATGTTGGCGACTTTGGCAAGCGCATGGCCTTCGGAGG
CATTGTCGGCGGTGTTACGGGTATCACGTTCGGAGCAAGTCGGCGGTGTT
ACGGGTATCACGTTCGGAGCAATGGACGGCCATAGAGCCATCCGCAATGA
CTCTATGGGCAGGTTCCCTACGACGGCCCTCAAGACAAAGGAGTTCATGC
GGCTGACCGCCTTGTCGGGCACTATATTCACAGGTGGACGGCCATAGAGC
CATCCGCAATGACTCTATGGGCAGGTTCCCTACGACGGCCCTCAAGACAA
AGGAGTTCATGCGGCTGACCGCCTTGTCGGGCACTATATTCACAGGGTTC
TTCTGTACGTACCAGGGGATCAAGTACGGGGCAAGGTTGGCTCGAAAAGA
GGATGATTTCTGGAACGTTCTTATCGCGTCGGCAGGATCGATCGCTCCCA
TGTCGACAGTGCCGGCGATGCGGTCGCGATTCCCTTACGCTGTGATCCTC
ATAGCCATGGACACGCTTAACAACCACGTGTTATAGGTTCTTCTGTACGT
ACCAGGGGATCAAGTACGGGGCAAGGTTGGCTCGAAAAGAGGATGATTTC
TGGAACGTTCTTATCGCGTCGGCAGGATCGATCGCTCCCATGTCGACAGT
GCCGGCGATGCGGTCGCGATTCCCTTACGCTGTGATCCTCATAGCCATGG
ACACGCTTAACAACCACGTGTTATAG back to top
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