mRNA_D-dudresnayi_contig9930.28745.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9930.28745.1
Unique NamemRNA_D-dudresnayi_contig9930.28745.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig9930.28745.1 vs. uniprot
Match: D7G2X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X3_ECTSI)

HSP 1 Score: 436 bits (1121), Expect = 1.180e-147
Identity = 209/245 (85.31%), Postives = 230/245 (93.88%), Query Frame = 3 
Query:    3 LLRGLRVKRTSNGEDIELLDAWEAVPGKKVIVAFFTHTADFNSWEYAQKLRHYLPQIDDAGVEVVGVSLGTVDAARDFCSETGFPLDSMFMDGNGDAYAALGFSNGFEPRLPGDKKVNPYLRLLPMLAGIGSPGTIQAVLKGYVGDPTANADWISSALSMVDNKEFDFLGKRGSRPLELATLRLQNMRQIVTKWNKLAPPNKELITQQGGTLVFKGRETIYSYKDKGILVYTDVLDMLQEIGVKL 737
            LLRG+ VK  S+G++++LL AWE  PGKK IVAFFTHTADFNSWEYAQKLRHYLPQIDDAGV VVGVSLGTVDAARDFC+ETGFPLD+MFMD  G AY+ALGFSNGFEPRLPGD+K+NPYLRLLPMLAGIGSPGTIQAVLKGYVGDP +NADW+SSALSMVDNKEFDFLG RGSRPLE+ATLRLQNMRQIVTKWNKLAPP+KELITQQGGT+VF+GR+ IY+YKDKGILVYTDVL+ML+ IGVKL
Sbjct:   24 LLRGVSVKSASSGKEMDLLSAWEPAPGKKTIVAFFTHTADFNSWEYAQKLRHYLPQIDDAGVGVVGVSLGTVDAARDFCAETGFPLDNMFMDATGQAYSALGFSNGFEPRLPGDRKINPYLRLLPMLAGIGSPGTIQAVLKGYVGDPNSNADWVSSALSMVDNKEFDFLGTRGSRPLEVATLRLQNMRQIVTKWNKLAPPDKELITQQGGTVVFEGRDKIYNYKDKGILVYTDVLEMLKTIGVKL 268
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BLAST of mRNA_D-dudresnayi_contig9930.28745.1 vs. uniprot
Match: A0A835Z7Y9_9STRA (AhpC/TSA antioxidant enzyme-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Y9_9STRA)

HSP 1 Score: 310 bits (793), Expect = 8.500e-98
Identity = 147/244 (60.25%), Postives = 186/244 (76.23%), Query Frame = 3 
Query:    3 LLRGLRVKRTSNGEDIELLDAWEAVPGKKVIVAFFTHTADFNSWEYAQKLRHYLPQIDDAGVEVVGVSLGTVDAARDFCSETGFPLDSMFMDGNGDAYAALGFSNGFEPRLPGDKKVNPYLRLLPMLAGIGSPGTIQAVLKGYVGDPTANADWISSALSMVDNKEFDFLGKRGSRPLELATLRLQNMRQIVTKWNKLAPPNKELITQQGGTLVFKGRETIYSYKDKGILVYTDVLDMLQEIGVK 734
            +L  + V   + G+ + L  AW+A  GKK +VAF TH ADFN+WEYAQKLRHYLP IDDAG EV+ V LGTV AA++F S T FPL  +++D  G AY  LGFS GF+P +    KVNPYL+LLPMLAGIGSPGTIQAVL+GYVGD  A+A W+ S L +V+ + FD LG +G+RP E+AT+RLQNMR+IVT+W+ L+PPNKELIT QGGTL+F G+E +Y Y D+GIL YT V ++L+E+G K
Sbjct:   61 VLSEVNVLSAATGQPLPLTQAWKAKKGKKTVVAFLTHFADFNAWEYAQKLRHYLPAIDDAGAEVIAVGLGTVAAAKEFASLTNFPLQRLYVDETGRAYEELGFSKGFQPPV----KVNPYLKLLPMLAGIGSPGTIQAVLRGYVGDRDADASWVESTLQLVEKRRFDVLGTQGARPFEVATVRLQNMREIVTRWDDLSPPNKELITWQGGTLIFDGKEVVYQYNDRGILTYTPVDEVLREVGAK 300
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BLAST of mRNA_D-dudresnayi_contig9930.28745.1 vs. uniprot
Match: W7TVS2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVS2_9STRA)

HSP 1 Score: 252 bits (643), Expect = 2.700e-75
Identity = 133/249 (53.41%), Postives = 166/249 (66.67%), Query Frame = 3 
Query:    3 LLRGLRVKRTSNGEDIELLDAWEAVPGKKVIVAFFTHTADFNSWEYAQKLRHYLPQIDDAGVEVVGVSLGTVDAARDFCSETG-FPLDSMFMDGNGDAYAALGFSNGFEPRLPGDKKVNPYLRLLPMLAGIGSPGTIQAVLKGYVGDPTANADWISSALS-----MVDNKEFDFLGKRGSRPLELATLRLQNMRQIVTKWNKLAPPNKELITQQGGTLVFKGRETIYSYKDKGILVYTDVLDMLQEIGV 731
            LL+   V     G  + L D +    GK  IVAF TH  DFNS+EYAQKL HYLP+++ A V VV V +GTV AA+ F S  G FPLD ++ D +  +Y   GFS GF   LP    VNPYL+LLPMLAGIGSPGT+QAVL GYVGD  A+A W    L      +VD   FD LG+ G+RP E+AT+RLQNM  I+  W  L PPNK+LITQQGG+LVF+GR+ +  Y+D+GIL YTDV D+L+ +G+
Sbjct:   68 LLKESNVLSAKTGRSVALGDVFPT-GGKMTIVAFLTHWGDFNSFEYAQKLLHYLPELERANVNVVAVGIGTVAAAQKFASLVGGFPLDRLYADESAASYGKFGFSRGFAADLP----VNPYLKLLPMLAGIGSPGTLQAVLAGYVGDKKADASWTGDYLKKEGQGLVDKSAFDVLGREGARPFEVATVRLQNMMAILPNWEALVPPNKQLITQQGGSLVFEGRKLVRVYRDRGILTYTDVEDLLRTVGM 311
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BLAST of mRNA_D-dudresnayi_contig9930.28745.1 vs. uniprot
Match: A0A383VHC5_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VHC5_TETOB)

HSP 1 Score: 223 bits (569), Expect = 1.170e-64
Identity = 114/234 (48.72%), Postives = 158/234 (67.52%), Query Frame = 3 
Query:    6 LRGLRVKRTSNGEDIELLDAWEAVPGKKVIVAFFTHTADFNSWEYAQKLRH-YLPQIDDAGVEVVGVSLGTVDAARDFCSETGFPLDSMFMDGNGDAYAALGFSNGFEPRLPGDKKVNPYLRLLPMLAGIGSPGTIQAVLKGYVGDPTANADWISSALSMVDNKEFDFLGKRGSRPLELATLRLQNMRQIVTKWNKLAPPNKELITQQGGTLVFKGRETIYSYKDKGILVYTDV 704
            L+G++V   ++G ++ELL  W+  P  +V++ F TH AD +SWEYAQKL    LPQ+ + G++V+ V LG+ + AR F S   FPL+ ++ D  G AY+ALGFS GF P       +NPY++LLPMLAGIGSPGT+Q V++GYVGD +A   + S+         FD LG+   RP ELATLRL NM  I+ KW +L+PP+ +L+ QQGG+LVFKG + I+ + D GIL YTD+
Sbjct:   40 LKGVKVFSAADGFEVELLSLWQPGPDTRVVIPFLTHFADLSSWEYAQKLNQKVLPQLREQGLQVITVGLGSPENARLFSSTLDFPLEGLYADPTGAAYSALGFSPGFAP----GADINPYMKLLPMLAGIGSPGTLQEVIRGYVGDRSAKPVFNSAT-------PFDILGQNYQRPFELATLRLFNMIGILPKWGELSPPDTKLLVQQGGSLVFKGTDVIFRHNDSGILKYTDI 262
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BLAST of mRNA_D-dudresnayi_contig9930.28745.1 vs. uniprot
Match: A0A699YK20_HAELA (Uncharacterized protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YK20_HAELA)

HSP 1 Score: 224 bits (570), Expect = 2.040e-64
Identity = 114/240 (47.50%), Postives = 155/240 (64.58%), Query Frame = 3 
Query:    6 LRGLRVKRTSNGEDIELLDAWEAVPGKKVIVAFFTHTADFNSWEYAQKLRHYLPQIDDAGVEVVGVSLGTVDAARDFCSETGFPLDSMFMDGNGDAYAALGFSNGFEPRLPGDKKVNPYLRLLPMLAGIGSPGTIQAVLKGYVGDPTANADWISSALSMVDNKEFDFLGKRGSRPLELATLRLQNMRQIVTKWNKLAPPNKELITQQGGTLVFKGRETIYSYKDKGILVYTDVLDMLQEI 725
            LR L V R  +GE +ELL  W+A PG KV++ F TH AD  SWEYAQKL   +P ++ +GV+V+ V LG+   A++F  +  FP   +F D +G AY ALGF+ GF P    D  ++PY +LLPMLAG+GS GT+Q V++GY+GD  A   +  +         FD LG    RP ELATLRL NM  ++++WN L+PPN+ L+TQQGGTL F G+E I+ + D GIL YTD   +L+ +
Sbjct:   80 LRDLTVYRAGSGEPVELLSLWQARPGSKVVMPFLTHFADLTSWEYAQKLVKIMPMLEASGVQVIAVGLGSAANAQEFARDLRFPATKLFADPSGAAYKALGFNPGFLP----DLDISPYAKLLPMLAGVGSEGTLQEVVRGYIGDRAAQPVFDRAT-------PFDILGTGYQRPFELATLRLFNMVGVLSRWNVLSPPNQALLTQQGGTLAFDGQEVIFKHVDSGILKYTDTEALLRVV 308
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BLAST of mRNA_D-dudresnayi_contig9930.28745.1 vs. uniprot
Match: A0A8J4CWY6_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4CWY6_9CHLO)

HSP 1 Score: 219 bits (559), Expect = 2.830e-63
Identity = 115/238 (48.32%), Postives = 147/238 (61.76%), Query Frame = 3 
Query:    6 LRGLRVKRTSNGEDIELLDAWEAVPGKKVIVAFFTHTADFNSWEYAQKLRHYLPQIDDAGVEVVGVSLGTVDAARDFCSETGFPLDSMFMDGNGDAYAALGFSNGFEPRLPGDKKVNPYLRLLPMLAGIGSPGTIQAVLKGYVGDPTANADWISSALSMVDNKEFDFLGKRGSRPLELATLRLQNMRQIVTKWNKLAPPNKELITQQGGTLVFKGRETIYSYKDKGILVYTDVLDMLQ 719
            LRG    + S+G+ +ELL  WE  P  K ++ F TH AD  SWE+AQKL  ++P ++ +GV V  V LG+V  A++F     FPLD ++       Y  LGFS GF P    D  VNPYL+LLPMLAGIGSPGT+Q V++GYVGD  A   + S          FD LG    RP ELATLRL NM  I+ KWN+L PP+  L+TQQGG LVF G + ++ + D GIL Y DV D+L+
Sbjct:   42 LRGKVAYKASSGDPVELLSLWEPYPTSKAVIPFLTHFADLTSWEFAQKLVKHIPTLEGSGVRVFAVGLGSVSNAQEFARTLNFPLDRLYALPEPSLYRDLGFSAGFAP----DLDVNPYLKLLPMLAGIGSPGTVQEVIRGYVGDQAAKPVFDSPT-------PFDVLGPGYQRPFELATLRLFNMMGILPKWNELCPPDPRLLTQQGGCLVFSGEQVVFKHVDSGILRYADVDDILK 268
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BLAST of mRNA_D-dudresnayi_contig9930.28745.1 vs. uniprot
Match: A0A836BNE7_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BNE7_9CHLO)

HSP 1 Score: 218 bits (554), Expect = 1.350e-62
Identity = 116/239 (48.54%), Postives = 154/239 (64.44%), Query Frame = 3 
Query:    6 LRGLRVKRTSNGEDIELLDAWEAVPGKKVIVAFFTHTADFNSWEYAQKLRHYLPQIDDAGVEVVGVSLGTVDAARDFCSETGFPLDSMFMDGNGDA-YAALGFSNGFEPRLPGDKKVNPYLRLLPMLAGIGSPGTIQAVLKGYVGDPTANADWISSALSMVDNKEFDFLGKRGSRPLELATLRLQNMRQIVTKWNKLAPPNKELITQQGGTLVFKGRETIYSYKDKGILVYTDVLDMLQ 719
            LRG    + S+G+ +ELL  WE VPG K ++AF TH AD +SWE AQKL   +P ++ +GV V  V LG+V  A++F      P+D ++   +G A Y ALGFS GF   LP    V+PYL+LLPMLAG+GSPGT+Q V++GYVGD  A   + S          FD LG    RP ELATLRL NM  I+ KW++L+PP++ L+TQQGG+LVF G   ++ + D GIL YTDV  ++Q
Sbjct:   35 LRGAVAYKASSGDPVELLSLWEPVPGSKAVIAFLTHFADLSSWELAQKLVKVIPTLEASGVRVALVGLGSVQNAQEFARVLNVPMDRLYASPDGGALYRALGFSGGFGEDLP----VSPYLKLLPMLAGVGSPGTLQEVIRGYVGDQAAKPVFDSPT-------PFDILGAGYQRPFELATLRLFNMIGILPKWSELSPPDETLLTQQGGSLVFSGDAVLFKHVDSGILRYTDVDTLMQ 262
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BLAST of mRNA_D-dudresnayi_contig9930.28745.1 vs. uniprot
Match: D8TR67_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TR67_VOLCA)

HSP 1 Score: 217 bits (553), Expect = 2.070e-62
Identity = 119/257 (46.30%), Postives = 159/257 (61.87%), Query Frame = 3 
Query:    6 LRGLRVKRTSNGEDIELLDAWEAVPGKKVIVAFFTHTADFNSWEYAQKLRHYLPQIDDAGVEVVGVSLGTVDAARDFCSETGFPLDSMF-MDGNGDAYAALGFSNGFEPRLPGDKKVNPYLRLLPMLAGIGSPGTIQAVLKGYVGDPTANADWISSALSMVDNKEFDFLGKRGSRPLELATLRLQNMRQIVTKWNKLAPPNKELITQQGGTLVFKGRETIYSYKDKGILVYTDVLDMLQEI--GVKL*TTAAAAAFE 767
            LRG    + S+G+ +ELL  WE  P  K +++F TH AD +SWE+AQKL   +P ++ +GV  + V LG+V  A++F     FPLD ++ M   G+ Y  LGFS GF P    D  VNPYL+L+PMLAG+GSPGT+Q VL+GYVGD TA   + S          FD LG    RP ELATLRL NM  I+ KW++L P +  L+TQQGG +VF G + ++ + D GIL YTDV ++L+         TT+ AAA E
Sbjct:   40 LRGKVAYKASSGDPVELLSLWEPAPTSKAVISFLTHFADLSSWEFAQKLVKVIPTLEGSGVRFLAVGLGSVGNAQEFARTLNFPLDRLYAMPEGGELYRQLGFSAGFAP----DLNVNPYLKLVPMLAGVGSPGTVQEVLRGYVGDKTAKPVFDSPT-------PFDVLGPGYQRPFELATLRLFNMMGILPKWSELCPADPSLLTQQGGCVVFAGEQVVFKHVDSGILRYTDVDEILKAALQADYAPTTSVAAAAE 285
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BLAST of mRNA_D-dudresnayi_contig9930.28745.1 vs. uniprot
Match: A0A1Y1I630_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I630_KLENI)

HSP 1 Score: 219 bits (557), Expect = 3.240e-62
Identity = 112/233 (48.07%), Postives = 148/233 (63.52%), Query Frame = 3 
Query:    6 LRGLRVKRTSNGEDIELLDAWEAVPGKKVIVAFFTHTADFNSWEYAQKLRHYLPQIDDAGVEVVGVSLGTVDAARDFCSETGFPLDSMFMDGNGDAYAALGFSNGFEPRLPGDKKVNPYLRLLPMLAGIGSPGTIQAVLKGYVGDPTANADWISSALSMVDNKEFDFLGKRGSRPLELATLRLQNMRQIVTKWNKLAPPNKELITQQGGTLVFKGRETIYSYKDKGILVYTDV 704
            L+G++V   ++G+ +ELL  W A PG +V++ F TH AD +SWE+AQKL   LP++   GV +V V LG+ D AR F    GFPL  ++ D  G  Y AL FS GF P    +  V+PYL+LLPML GIGSPGTIQ V +GY GD  +   +  S         FD LGK   RP+ELATLRL NM  I+ KW +++PP   L+TQQGG++VF G + ++ + D GIL YTDV
Sbjct:  112 LKGVQVLEAASGQPVELLSLWAAKPGVRVVIPFMTHFADLSSWEFAQKLAKKLPELQANGVRIVAVGLGSPDNARRFAETVGFPLQLLYADPTGACYRALNFSPGFAP----EAGVSPYLKLLPMLMGIGSPGTIQEVARGYFGDRGSKPVFEGST-------PFDILGKGYQRPMELATLRLFNMFGILQKWGEMSPPETRLLTQQGGSIVFDGEDVVFKHVDSGILKYTDV 333
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BLAST of mRNA_D-dudresnayi_contig9930.28745.1 vs. uniprot
Match: A0A7S0VR42_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VR42_9CRYP)

HSP 1 Score: 214 bits (545), Expect = 1.400e-60
Identity = 113/249 (45.38%), Postives = 149/249 (59.84%), Query Frame = 3 
Query:    3 LLRGLRVKRTSNGEDIELLDAWEAVPGKKVIVAFFTHTADFNSWEYAQKLRHYLPQIDDAGVEVVGVSLGTVDAARDFCSETGFPLDSMFMDGNGDAYAALGFSNGF---EPRLPGDKKVNPYLRLLPMLAGIGSPGTIQAVLKGYVGDPTANADWISSALSM--------VDNKEFDFLGKRGSRPLELATLRLQNMRQIVTKWNKLAPPNKELITQQGGTLVFKGRETIYSYKDKGILVYTDVLDML 716
            LL G+ V   S+G+++ L  AW    GK ++V   TH  D   WEYAQKLR++LP + + GV+V  V +G  +AA++F    G P D ++ DG+     ALG S GF     + P     +PYLRLLPML G+GSPGTI  V  GY GD +AN +WI   L          VD   FD LG    RP ELAT+RLQNM  ++++W+ L P NK+L+ QQGGTLVF G E  Y Y DKGILVY  + +++
Sbjct:   89 LLSGVDVVSVSSGQNMPLTKAWNKNGGKSLVV-LLTHWGDLTCWEYAQKLRYFLPTLKEKGVQVTLVGIGGQEAAKEFAESNGIPTDILYTDGDASCAGALGLSPGFGRDSAQQPQANAASPYLRLLPMLLGVGSPGTIGKVAYGYFGDRSANPEWIPEQLRRTQTGSFPYVDPSTFDLLGDGYLRPFELATVRLQNMISVLSRWDALTPDNKDLVVQQGGTLVFDGEECAYRYDDKGILVYAPLEEVI 336
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9930.28745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2X3_ECTSI1.180e-14785.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z7Y9_9STRA8.500e-9860.25AhpC/TSA antioxidant enzyme-domain-containing prot... [more]
W7TVS2_9STRA2.700e-7553.41Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A383VHC5_TETOB1.170e-6448.72Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A699YK20_HAELA2.040e-6447.50Uncharacterized protein n=1 Tax=Haematococcus lacu... [more]
A0A8J4CWY6_9CHLO2.830e-6348.32Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ... [more]
A0A836BNE7_9CHLO1.350e-6248.54Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
D8TR67_VOLCA2.070e-6246.30Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A0A1Y1I630_KLENI3.240e-6248.07Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A7S0VR42_9CRYP1.400e-6045.38Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9930contigD-dudresnayi_contig9930:2886..9624 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score288.5
Seed ortholog evalue1.9e-75
Seed eggNOG ortholog2880.D7G2X3
EggNOG free text desc.AhpC/TSA antioxidant enzyme
EggNOG OGs2CY4S@1,2S21S@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-09_004590.1
Exons6
Model size1833
Cds size474
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9930.28745.1prot_D-dudresnayi_contig9930.28745.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9930 3979..8416 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930954.818148-UTR-D-dudresnayi_contig9930:2885..39781622930954.818148-UTR-D-dudresnayi_contig9930:2885..3978Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9930 2886..3978 -
1690557978.5822208-UTR-D-dudresnayi_contig9930:2885..39781690557978.5822208-UTR-D-dudresnayi_contig9930:2885..3978Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9930 2886..3978 -
1622930954.9229064-UTR-D-dudresnayi_contig9930:8416..85491622930954.9229064-UTR-D-dudresnayi_contig9930:8416..8549Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9930 8417..8549 -
1690557978.6452224-UTR-D-dudresnayi_contig9930:8416..85491690557978.6452224-UTR-D-dudresnayi_contig9930:8416..8549Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9930 8417..8549 -
1622930954.9451084-UTR-D-dudresnayi_contig9930:9491..96241622930954.9451084-UTR-D-dudresnayi_contig9930:9491..9624Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9930 9492..9624 -
1690557978.6544-UTR-D-dudresnayi_contig9930:9491..96241690557978.6544-UTR-D-dudresnayi_contig9930:9491..9624Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9930 9492..9624 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930954.8367403-CDS-D-dudresnayi_contig9930:3978..40381622930954.8367403-CDS-D-dudresnayi_contig9930:3978..4038Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9930 3979..4038 -
1690557978.596941-CDS-D-dudresnayi_contig9930:3978..40381690557978.596941-CDS-D-dudresnayi_contig9930:3978..4038Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9930 3979..4038 -
1622930954.8558347-CDS-D-dudresnayi_contig9930:5331..55951622930954.8558347-CDS-D-dudresnayi_contig9930:5331..5595Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9930 5332..5595 -
1690557978.606235-CDS-D-dudresnayi_contig9930:5331..55951690557978.606235-CDS-D-dudresnayi_contig9930:5331..5595Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9930 5332..5595 -
1622930954.8695726-CDS-D-dudresnayi_contig9930:6711..67331622930954.8695726-CDS-D-dudresnayi_contig9930:6711..6733Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9930 6712..6733 -
1690557978.6153758-CDS-D-dudresnayi_contig9930:6711..67331690557978.6153758-CDS-D-dudresnayi_contig9930:6711..6733Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9930 6712..6733 -
1622930954.884855-CDS-D-dudresnayi_contig9930:7091..72101622930954.884855-CDS-D-dudresnayi_contig9930:7091..7210Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9930 7092..7210 -
1690557978.62539-CDS-D-dudresnayi_contig9930:7091..72101690557978.62539-CDS-D-dudresnayi_contig9930:7091..7210Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9930 7092..7210 -
1622930954.903644-CDS-D-dudresnayi_contig9930:8407..84161622930954.903644-CDS-D-dudresnayi_contig9930:8407..8416Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9930 8408..8416 -
1690557978.635929-CDS-D-dudresnayi_contig9930:8407..84161690557978.635929-CDS-D-dudresnayi_contig9930:8407..8416Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9930 8408..8416 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9930.28745.1

>prot_D-dudresnayi_contig9930.28745.1 ID=prot_D-dudresnayi_contig9930.28745.1|Name=mRNA_D-dudresnayi_contig9930.28745.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=158bp
MFMDGNGDAYAALGFSNGFEPRLPGDKKVNPYLRLLPMLAGIGSPGTIQA
VLKGYVGDPTANADWISSALSMVDNKEFDFLGKRGSRPLELATLRLQNMR
QIVTKWNKLAPPNKELITQQGGTLVFKGRETIYSYKDKGILVYTDVLDML
QEIGVKL*
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mRNA from alignment at D-dudresnayi_contig9930:2886..9624-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9930.28745.1 ID=mRNA_D-dudresnayi_contig9930.28745.1|Name=mRNA_D-dudresnayi_contig9930.28745.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=6739bp|location=Sequence derived from alignment at D-dudresnayi_contig9930:2886..9624- (Desmarestia dudresnayi DdudBR16 monoicous)
AGCTGCTCCGAGGGTTGAGGGTGAAGCGTACGTCGAACGGCGAGGACATC
GAGCTTCTTGATGCTTGGGAGGCTGTGCCGGGCAAGAAGGTCATCGTCGC
GTTCTTCACTCATACAGCGGACTTCAACTCTTGGTAAGGGTCGGTTACAA
CGGGTAATAAAAAAGAAGGCATGAATCATGACAAAACAGCCGGCTTGTTT
TGTGACTCCCCCCTCCGCCCTCCCCGAAAAAAAAAACACGTTTGAAAGTC
ACGAATCGTGCTTTAAATTTCTATTCGAATTTTGTATCGACGTGCTGAGT
GAGGTGTGCGTTCCCGTCCGTGTGCTCTGAAAATACTGTCGCGTCGTACC
GCACTTGCTCTACTATGCGATGCCAACTGCGCCCTTCCTGCTTACCTGTA
CCTACCTACCTATCTGCCTGCAGTTGTGGAAAGTTGATTACCGATAGAAT
AGTCGTTAATCATGATTGCACAAGAGCAGGATAGAGCTCTGTATACTGCT
GCTGGCGCCGCAAAAACCACAGGCGGAATATTTACGAGGAATCTTCCGCC
GCCTATCATAGTAGAGCCTTCTCTCTCTTTGACGATCCCACCCCACCCCG
GCCTTGAAGCTCTGCTCACTGTGGTCGCCGAGTTCGAGCTTCGCTAAAAA
CAAAACATGGACTAAAAAAAAACATACGAACGACCTATAAAGTATCACAC
AGTGAGGTTGACCATTATCCCCTGGCCCTCGAACCAGTTTGGAACATGAC
GTCACGGCTGACGTTTTTTTTTTTTGTTTCCGTCTCATTTATTATCTTCG
CCCTATTTTTTCTCTACCTCCATCTCTCTTCATAATTCAGATCTGGGGTC
ACATAGTAGGCGCTCTTCCCGCCTTCCCACTACGGCACGTGCGTACATTT
CTATCGCGACAAGAGTGCAGCACTTTCTTCCCTCGTCGACTTTCATCGAA
GTGTGCTTACTCACGCTCTCGCGTTTGTAATTATAAATAATAATATGGGC
ACATACGATCCGTGTCCTTTTGACAGCAACCAATATTGCTACCGACTCCT
CCGTTCGGTTTTGGTGTTCCTGTAGGGAGTACGCGCAGAAGCTCCGGCAC
TACCTGCCCCAGATTGACGACGCAGGGGTCGAGGTCGTGGGTGTAAGTCT
TGGCACCGTTGATGCCGCTCGCGACTTTTGCTCCGAGACCGGGTTTCCAC
TTGACAGCATGTTCATGGTGAGCTCATTGTGTTTTTTTCACCCTCTTCCT
CGTGAATTTGTTCGGCCGTTATGTTTTAAGATATCTTGAGTCTACTCGTG
GATCTACGAGTATGATGCTTATTACTTAATAGCCGTAAAGTTCGTCGTAT
TTCAGTACTTTAATCAAGTCATTTTTGTCCGTTTGTTTAATTTACTGTAG
TACTTCGTATGTCTTTGTGTTTTGCTGTTGTGGTGGTACTTATTAATAGG
TTGTTTTTTTCGGTCTCTGTGGACGTAGCATATTTTGGTATAATACGACA
AACAATGGGCATGTCAAGGTCAAGTCCACCGCCGAACAAAGGAGTGGACC
TCTACACTCTGTTTCCGTTCGTGTCAAGGTCGCTGCAACTGGAAAATCCT
GCCTGTCATTCGAACAGCGTACCGAGACTGTACATGATGGACTTCCTCGT
TAGAATCATAGACTCTACCTTCAGAGGCATTTCTCTTAGGGTTTGCTTGG
GTTCGTGATGCTGGAGGCATCAACAGCGGGAAAATTGAAATTTCCGCGAA
AAAGAGGGATAATTTATTGTATCCTTCGCCGCCGCAATTCACGGTACTGT
TGTTGTAGTCACATGAAAAAAAAAAAAAAGAGCTTTAAAAAAAAAAGAGA
GAACCTTCAAGAAAGCTGCACCGGGGAAAACACGGCTTTACTTTTACGCA
TCCATCCGCCAGAGGATACCTGAAATATAAACAAAAAAGTAACGCAGTCC
TGCCCAGGGCGGGGGCTTATCATACGTAGTCCCGCTGGGTATCCCGACGC
GATATGCTTGCTCGCTTGCTTGCTTTGTGTGTGCGTGCGGCAGCTAAGCG
GAGGGCTGTTTACCGGTTGGACGAAAACTATGGTTGACACACGTTATTTT
TTGTTGATTTGAAAGTTGTGCCCAGCCAACCCAACCCGGCCCTGACCCTA
GGACTACGGCACAGTAGTTAGCGGAGCCAAAATCCGTGTGTTCGGCGCTG
AAATCGAGGAAACGTGTTTTTTTGCTCTGTGTCGTTCTTTGTATCGAGCC
TGTGAGGTTGGGAAGGTCCCGGAAATTGTTGATATGGAGTTTGTATCATC
ACAACCATAGTGTTCGTCTATCTGGTAAACACGCACTGGCTAAGCCTGTT
GACGTTTACGGCGTGGCTTGCGCTGCGTGTGCTGCTGCTGCACATGTTGC
TCGCCAACGCGCAGGACGGAAACGGCGACGCCTATGCCGCGCTCGGGTTC
TCGAACGGGTTTGAGCCGCGGCTGCCCGGAGACAAGAAGGTTAACCCCTA
CCTGAGACTGCTGCCCATGCTCGCCGGCATTGGGTAAGACGTAAGACGTA
TTTTTTCTGCGTTGTTACCAGAGGCGCTGGGGCGGGTGTAGTACAGAGTA
TCATGCACGCTCTCTCGCAAGCTCGCTCTAGCCCACGCCCTTGCAGCTCT
CTTGCACTACTACTACTGTTGTCGTTTGTCGTCACGAAACGCGGCCAATA
TGAAATGCACAGGTACGAGACACGAACCCGACCTTCCCTCTAGCCTCTTT
TTTGTATGTGCACCCGTCTCTACCGTTGCCCGTCACCCGTACTCTTTGCG
CGCCCGTTGTTGTTACCCCTGTTGGATAACGCACGCTGCGGACTCGGTGT
ATCCGGTGTTGGCTTGGGGGCACCACCGTGTGTTCTCCCAGATCGCCAGG
GACCATCCAGGCGGTGAGTCGGCGCCGGGGTGGTGGTGGTGGTTGTGCTT
ACTGCTTTTGTCCGCGGAGCTGGGCGTTGCGTTAAGTGTGACGCTATTAA
ATAGAAAAACATGCTGAGAGCGTTGGTATATAGATGAGGTGCAAAAACCG
AGCGCGAAGCGCGACTTATTTTTTCTTCTTTTTTTTCTTACAAATAAAAA
ACTCAATACTGATGGGTCGCGATACACGAAAAAAAATCAGCCGAGGGTGC
CAAAATGGAATTTTTCTTTTTTTTCATCCGTTTGTCTGTCTGTCTGTCTG
TGTGATTGTAACATTTATCGCACTTCTTTTTAACATGCAGCTTGATAACA
CGACGCAAATGGTGATGGTGGTGGTGGAGCGTGTAGTGGTGGACGTTGTT
TTCTGGGCAGGGTGATATTTATACGTTCAGAATCTAATTGGCAACCGTAC
CACAGATGATATTATCATGAGGCTGTGGCTTTCGGGAAGTGTGTCGCGTG
CAAAGCGTGTTCGGTACCTCTGTTGCTTGTTTCGTGATAAGATAAACACG
TATGGAGGCAACTGCGACGAACGATGCCTACAAATGGTGTAGACACGTCA
ACTAACTCACCTGTTGAACAATGAACCCGGTTCGCTTGCAAAGCTCATTT
GCATATACGTCGACGGTTTTTGATTACTAAGAACGACGAAGAGATGTCGC
CTCCAATCGATAAATTTGCTCACGCTGACCTACCGTTCCCTTTCGGTTCA
TCACGCGAATGCACGAGTCATAATTTAACGTTTTCATTTGAGAAACAAAT
ATATATTGTTTTCCTATTGAGGAGGTGATCCTGCCGCACGTTTCCCTATA
CGGCTGGCTACCTTGGCGCAAGGTCAGATAGAATACCCGCGACCGAAGTA
TCACACAACAATGAAGTTGGCGATTATCCCCTCTTAATAGCTCCTGAACC
AGTTTAAAACGTTGCGGCTGGTGTATTTATAACTGAAAATAACTATGATA
TGTTGTGTTTTGTCCCCGACCTTGCAACATTGTCGGACAGTGAGCAACAC
CTGGTATGGCCAACTTTCATGGAAAACTTGAGCTTGCCCATTATGGTGCG
TGATGCCGTGAATCTACTGTGACTTGTAGGTGTTGAAGGGATACGTGGGA
GACCCAACCGCGAACGCTGATTGGATATCGAGCGCCCTGAGCATGGTGGA
CAATAAGGAGTTCGACTTCCTGGGGAAGCGGGGGTCTAGGCCGCTCGAGC
TGGCCACGCTTCGGCTGCAGAACATGCGTCAGATCGTAACCAAGTGGAAC
AAGCTGGCGCCCCCCAACAAGGAGCTGATCACGCAACAAGGGGGCACGCT
CGTCTTCAAGGGGAGGGAGACGATTTACAGTTACAAGGATAAGGTGTGTA
CGTACGGGAGTGTACTCGTAGACGGCGAGACGGCAAAAAAATAAATAAAA
AAAGAGAAGGAAAAAAATAAGAAGAGCTTAAAAAAAAACAAAAACGTGTG
AACCTTCAAAAGTTGGAACCGTGGGAATTTGTGAGGGTTTAGCTTCGTTT
TTACCCATCCGTCCGGAGGATAACAATGGTTGACAACAATGGTTGAAACA
AAAAGTAGACAAGCGATGCAACGCGCGGGATATATATATATATGCGTGCA
CGTATCATAGCATCGCATAACGTTTGCACCTTATTATCATCACTCCTACT
TTTTCTGTGCCGTGTTTTTGTTGCAATCATATTGGCATGTAGAGAGCCAC
ACAACAGACCAGAAGGTTTCTTGTTTGAAAATTATGTGTCGTGTGAGTGG
GCTGTATTTTCCGGGATAGTGGGGGATGTGGGTACACAAATGATGTTGGT
GTGACCGTGTCGATGTGACATGATAGCGTGTTGCAGCGTAGCGTAGTGCA
GTCGACTCGAAGGAGATGCCGCTACCAGAGGGCGGAGCGTAGCCGCGCAA
GAGGGGTGCGCGGGGTTGGGGTTGGTGAGCGGGCTTACAAAGGATTGATT
CCCTTGTCTGCGACAACCGCAAACGTCTATCGGGGTAGCGTCGAGATTGG
GGTATGCTAGCGGCTACCCTCGCTCGGAGGGTGTTGCGATAGTCGGTCAA
GCGCAGCGCTCATCCGTCGGTAGCTTTATACGTATACATACAAACTTTAT
TTTTATCTTTCAATTCGATGAAAGTCGACGAGGGAAGAAATGATGCACTC
TTCTCGCGATAAAAATGTAGGCACGTACCGTAGTGGGAAGGCGGGAGGAG
CGCCTACTATGTGGCCCCGGATCTGATTTCGAAGAGAGATGAAGCTAGAG
AAGGAATACAGGGCGAAGATAATAAATGGGACGGAAAAAAATACAATAAA
ATAAAATAAAAGAACTCTCCCGGCCGATCGCTCAGCGACCTGTGCAGGCC
GTGGTCACAAGTAGGTAACCCCCTCCCCCCTCTATGGTCATACGACTACG
GCCATGCATGAAATGGGTACACCCCCATCCTCCCTTGGTATCTGTCGCGC
AGAGGGTTCGGCATTTCCATATTAGCTCATCGACTTTCATCGAATTGTGA
AAGGTCATTTTGTTTTCACCGGCATTCGCACCCCCCGATCTTCCACCAAC
AGAAGAGGTAACAATCTAAACACTGAGACTAGAGCGTCACCCTTGCTTAC
AACTTACTTTTCGTATTCGTTTCCCGTCGACGACAGGGAATCCTGGTCTA
CACTGACGTGCTCGACATGCTGCAGGAGATCGGAGTCAAGTTGTAGACAA
CCGCCGCCGCCGCCGCTTTCGAAGACGATGGCACCACCAGCGAGCAACCG
ACGCTTATGATAATCTTTGTGTGCCGCGTTTGTCCTTCTTGTTGGCGTTG
CGATATTGCGTTATTGCTTCCCCTTCGAGGGCTGCTTCCGTCCTATGTAC
GTGTAGACGGGACCCGCAAGAACTCGTTCTTTTTAGACAGGTGTAGGCAC
GCCCGCCCATGCATTCGGTCTTCCAGCTGTACGAGAAGCTAAGACATGGA
GGGTGATACAGTACCCCCCCTCCCCCCCCCCTGGTAAAAACGCCGCAACT
GCGTGCGAGAGACCCGGCCCTGCGTGTAGGGTTTTATGGGACACGTTACT
CCGTGGTTGGGGACGTTTATTCTGTCGCCCCCCGGTAAGAATTTTCTTTT
GCGGTGTACGAAAAATTGCTTCTCCGCAGCCGAGCCGGCCAACGTTTCTG
TGATGTACTAGCCGTCAGCGGTATAATAGACAAGAGTGAAGAGTGACGGC
GTTGCCTGGGGTTTGGACTTTTATTGGGAGGGCAGCCAGCCGCCCGCGTT
GTTGTGCTCGTCTACCGAAGCCTGGAAAACGCAGAAGCGAGAATGCTTGC
AAACGAACTACCGCCGAGTGGCGCAAGAAGTAGACACAAGACAGGCGTAT
TGTCGTGGGCGGTGTGAGTCTGTCTGTTTCTCTCCCCCAGGTGAAGTTTT
GAGCACAACCACGAGTTAACGGTCCAGGTGCTATTAATACTATTATGTTA
CATGGTATGATTTTATGTTTGTCCGAAAATCATCGCGATTGGAACTCTGT
TGCGGTATGTGCCGTTCCTTACTTTCTCGACTTCTCGTCTATGTCCCTGC
CTTTTGCCCCCACACCTATTGCCGCGTACTCATCGATTGTAAAATTCAAC
ACCCTCAACTCATCGATTGTGAAATTTAACGCCTTCTAATCCGGTATCCG
ATTACGTTCCCCATACCCTGGGGACTAACAGGCGGGTGCATCCTCACCCC
GCGTGCTATATAAGCAATTATATGGTATACGTTATGTTTTTCTGACATCT
CGCTAGCGAGACTTCCGTCGTAGGGATAACAAGTATGAT
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9930:2886..9624-

>mRNA_D-dudresnayi_contig9930.28745.1 ID=mRNA_D-dudresnayi_contig9930.28745.1|Name=mRNA_D-dudresnayi_contig9930.28745.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=948bp|location=Sequence derived from alignment at D-dudresnayi_contig9930:2886..9624- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTTCATGATGTTCATGGACGGAAACGGCGACGCCTATGCCGCGCTCGG
GTTCTCGAACGGGTTTGAGCCGCGGCTGCCCGGAGACAAGAAGGTTAACC
CCTACCTGAGACTGCTGCCCATGCTCGCCGGCATTGGGACGGAAACGGCG
ACGCCTATGCCGCGCTCGGGTTCTCGAACGGGTTTGAGCCGCGGCTGCCC
GGAGACAAGAAGGTTAACCCCTACCTGAGACTGCTGCCCATGCTCGCCGG
CATTGGATCGCCAGGGACCATCCAGGCGATCGCCAGGGACCATCCAGGCG
GTGTTGAAGGGATACGTGGGAGACCCAACCGCGAACGCTGATTGGATATC
GAGCGCCCTGAGCATGGTGGACAATAAGGAGTTCGACTTCCTGGGGAAGC
GGGGGTCTAGGCCGCTCGAGCTGGCCACGCTTCGGCTGCAGAACATGCGT
CAGATCGTAACCAAGTGGAACAAGCTGGCGCCCCCCAACAAGGAGCTGAT
CACGCAACAAGGGGGCACGCTCGTCTTCAAGGGGAGGGAGACGATTTACA
GTTACAAGGATAAGGTGTTGAAGGGATACGTGGGAGACCCAACCGCGAAC
GCTGATTGGATATCGAGCGCCCTGAGCATGGTGGACAATAAGGAGTTCGA
CTTCCTGGGGAAGCGGGGGTCTAGGCCGCTCGAGCTGGCCACGCTTCGGC
TGCAGAACATGCGTCAGATCGTAACCAAGTGGAACAAGCTGGCGCCCCCC
AACAAGGAGCTGATCACGCAACAAGGGGGCACGCTCGTCTTCAAGGGGAG
GGAGACGATTTACAGTTACAAGGATAAGGGAATCCTGGTCTACACTGACG
TGCTCGACATGCTGCAGGAGATCGGAGTCAAGTTGTAGGGAATCCTGGTC
TACACTGACGTGCTCGACATGCTGCAGGAGATCGGAGTCAAGTTGTAG
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