mRNA_D-dudresnayi_contig9917.28730.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
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Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9917.28730.1 vs. uniprot
Match: A0A6H5JHW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW4_9PHAE) HSP 1 Score: 506 bits (1302), Expect = 1.690e-148 Identity = 494/1317 (37.51%), Postives = 586/1317 (44.50%), Query Frame = 1
Query: 1 DPRKVVYLLNYMLEVRRATSDKEEVSMGG-----------KRTFRLGLDEARLMFWLEVQVLFEMSAVMTPSREDMGKVYDKFFLRGSGFYVHELADGGQLKLPGRRSWDGHFAGLPDSCSGTVAGTGGSATESSERAENAASSSTASGAISASSEYFASASGGVVEVDAEEVSNGNGGVLASGEGRDVVGFDATTAAADRGTVDEKVVGAVPPPPTEKAPALPGSTSFASSTDGSITDGCLSSVGGXXXXXXXXXXXXKGRS---------TLPIEMPSADLSKMFRASQRRVEETLNSGCFYRFKTSPWIGRMVAHLNNSPDFVHVPFAKIMAEQELRDAMMLHMIIGQVPGWLQVWREVEVSVKPRMALLQTRRSVRQRPVTPPLGMGDD---------HHSRRATREQRYPSPTVTSAYNS-----SYTSFSTPHPLRAHARTFETQNFAYGGASGASNGSVEAKADAAVAILASAVYLWDFFLSAESHASLGLARDTSAYATLRELLVESDGXXXXXXXXXXXXXXAKVAALSTHGSDAGVDLAVTVGKALFDMQRQVLRK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LCASVYPDFQASSTYEHLCDELTTGAHSPPRIPARPPAD---------DXXXXXXXXXXXXTSTLPSTTPSPRPMEPSSGGTPLSVEGLSLPSPXXXXXXXXXXXXXXXXXXXXXXXGAEKP--RSPFAFLGA-SPGTERRR------GSHERRSSAPVAAGKMAGARAVVARG----GDVDDERRRPWADAAAFRSVGXXXXXXXXXXXXKAEAVSGPEFDVLWSASRGWLLEKLMRRVELPSHVSRHRPPLGK--EDGGAKGEGAARRVSRSGSGAGLASAEVREHLSCPQKERRFGRRPY-----AIPS-------SFPGVGSSTARRAPGSPSAGDSPIRER------------EVTSTSSPGVAGGRRAGLLGKGGNGDGVDGCAEWVVSFASSLERGVTTVK-----------TETATRVALHDRGLEAAVPEGLEPFFCPSLPADGKGPCACLETGAGGRRGAGDKRRRVKSGSRGGGKICARGGC---ALAPPPPQLFSFAAPGRDGVGTFYGACISVFRPVSQWVGGE 3021
DPRKVVYLLNYMLEVR A + +GG K + LDEARLMFWLEVQVLFEMSAVM PSR+DM KVYDKFF GSGFYVHEL D Q K+ RRSWDG +GLP G VA SA + E A+ ++S+ SG SE AS V + PP + SST+G +D + + G GR +LP+E +ADLSK+FRASQ +VEETL +GCFYRFKTSPW GRMVAHL+NSPDFVHVPF +IMAEQELRD MMLHMI+ Q PGWLQVW+E+E++VKPRMALLQTRRSVRQR + G H RE + T+ + +S S SFS P P E KA AAVAI+ASAVYLWDFFLSA+SHASLG+ARDT+AY TL++LL E+ + G DAG D AV+VGKAL DMQR VLRK LCASVYPDFQASS++EHLC ELTTG SP R+P PP + XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX EK SPFAFLG +P ++ R SH RRSSAP + +R G G VD + A + R+ + + VSGP+F+ LW ASRGW+LEK+MRRVELP HVSRHRPPL K + G G+GA V S +G A ++R+HLS P+ RR GRRP +P S GVG ST + G AGD + + T PG G R G G G+G+ GCAEW VSF+ SL +G+ TV+ TE A VA + GL+ +PEGLE F+CP LPA G+ P AC +GG+ +G V G RG G +RGGC + PPPP+LF+FAAPGR G GTFYGAC+SVFRPVSQWVGGE
Sbjct: 130 DPRKVVYLLNYMLEVRCAGTG----GVGGXXXXXXXXXXXKEAVIISLDEARLMFWLEVQVLFEMSAVMAPSRDDMSKVYDKFFRPGSGFYVHELTDTRQAKIRTRRSWDGDVSGLPSV--GRVARPDPSAKTAKEVAQPQDAASSGSG-----SEGVASTXXXXXAVXXXXXXXXXXXXXXXXXXXXXXXXXXEGKXXXXXXXXXNIKAGEPP----SSAXXXXXXXXRSSTEGGGSD--VLAKHGAEAGENGTREGSGGRKAAAGAEDWVSLPVEFLAADLSKIFRASQEKVEETLTAGCFYRFKTSPWKGRMVAHLSNSPDFVHVPFERIMAEQELRDVMMLHMIVTQTPGWLQVWKEIELTVKPRMALLQTRRSVRQRRGSALSSRGSGVSVWLYFMIHGGVNEEREAIIEAGTLGTQRSSIRVGTSTPSFSPPSPDMR-----------------------ELKAAAAVAIVASAVYLWDFFLSADSHASLGVARDTNAYGTLKQLLAENVPGDKMGGCGAGDASSGDGPG-TQKGRDAGDDYAVSVGKALLDMQRHVLRKAAWGKATPGNKGIRWDKVVERVWKEIGDEEETLDTKGFGGFKKKVKEMLESREEATLRKKVRSEDHLEIYGKLKEGIGMKSYLDGPMDYAKKLKLQFRVGDLDLPERRKRYSSXXXXXXXDRQTCPCGKSEEIRPHIVGECELYRKEREDLEEDMRQRGCDMDKFGKLDNSEKIIAVIGDRWWAQEAVEDGGIRCARNFYVVCGRNVKSSQMLVLCASVYPDFQASSSHEHLCAELTTGTRSPARLPPGPPDELDFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVGAGEKAGSASPFAFLGGGTPPSDGERKVITAGNSHARRSSAPGVSPTGVASRGAGVGGKNGPGRVDPFQSEDDAPRVSDRA-------------GRVQGVSGPQFEPLWRASRGWVLEKVMRRVELPPHVSRHRPPLDKACQQGRRGGKGA---VGSGTSSSGTAPPDLRQHLSLPRTARRLGRRPNHSSGSLVPGEPTEEADSSAGVGGST--QGGGGGVAGDLDVASPPDVLGSRSGFGVQETQGIEPGPTGDRAREDGGGGVVGEGIRGCAEWAVSFSGSLRQGIMTVQVWGGHEARGRCTEHAVCVAPRNLGLDV-LPEGLEAFYCPGLPASGEAPRACPPP-SGGKSSSG-----VGKGGRGSGS--SRGGCFGPGVPPPPPRLFTFAAPGRSGTGTFYGACLSVFRPVSQWVGGE 1378
BLAST of mRNA_D-dudresnayi_contig9917.28730.1 vs. uniprot
Match: D8LH28_ECTSI (UDENN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH28_ECTSI) HSP 1 Score: 342 bits (877), Expect = 7.410e-94 Identity = 282/617 (45.71%), Postives = 335/617 (54.29%), Query Frame = 1
Query: 1297 EAKADAAVAILASAVYLWDFFLSAESHASLGLARDTSAYATLRELLVESDGXXXXXXXXXXXXXXAKVAALSTHGSDAGVDLAVTVGKALFDMQRQVLRKLCASVYPDFQASSTYEHLCDELTTGAHSPPRIPARPPADDXXXXXXXXXXXXTSTLPSTTPSPRPMEPSSGGTPLSVEGLSLPSPXXXXXXXXXXXXXXXXXXXXXXXGAE-------KPRSPFAFLGA-SPGTERRR------GSHERRSSAPVAAGKMAGARAVVARGGDVDDERRRPWADAAAFRSVGXXXXXXXXXXXXKAEAVSGPEFDVLWSASRGWLLEKLMRRVELPSHVSRHRPPLGKE-DGGAKGEGAARRVSRSGSGAGLASAEVREHLSCPQKERRFGRRPY-----AIPSSFP-------GVGSSTARRAPGSPSAGDSPIRER------------EVTSTSSPGVAGGRRAGLLGKGGNGDGVDGCAEWVVSFASSLERGVTTVKTETATRVALHDRGLEAAVPEGLEPFFCPSLPADGKGPCACLETGAGGRRGAGDKRRRVKSGSRGGGKICARGGC---ALAPPPPQLFSFAAPGRDGVGTFYGACISVFRPVSQWVGGE 3021
E KA AAVAI+ASAVYLWDFFLSA+SHASLG+ARDT+AY TL++LL E+ + G DAG D AV+VGKAL DMQR VLRK+CASVYPDFQASS++EHLC ELTTG SP R+P PP D ++ XXXXXXXXXXXXXXXXXXXXX G+E SPFAFLG +P ++ R SH RRSSAP + +R GG R P+ V + + VSGP+F+ LW ASRGW+LEK+MRRVELP HVSRHRPP K G +GE A RS SG A ++R+HLS P+ RR GRRP +P P GVG ST G AGD + + T PG G R G G G G+G+ GCAEW VSF+ SL++G+TTV+TE A VA + GL+ PEGLE F+ P LPA G+ P AC G G G G G RG G +RG C + PPPP+LF+FAAPGR G GTFYGAC+SVFRPVSQW+GGE
Sbjct: 3 ELKAAAAVAIVASAVYLWDFFLSADSHASLGVARDTNAYVTLKQLLAENVPGDKMGGPGAGDASSGD-GPDTQKGRDAGDDYAVSVGKALLDMQRHVLRKICASVYPDFQASSSHEHLCAELTTGTRSPARLPPGPP--DQLDFDPAPSQQQRDSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGSEVGAGDKATSASPFAFLGGGTPPSDGERKAVTAGNSHARRSSAPGVSPTGVASRGAGI-GGKSGPGRVDPFPPEEDAPRVSDRAG--------RVQGVSGPQFEPLWRASRGWVLEKVMRRVELPPHVSRHRPPWDKACQQGRRGEKGAVGTGRSSSG--TAPPDLRQHLSLPRTARRLGRRPSHSSGSLVPGEPPKEADSSAGVGGST-HAGGGGGVAGDLDVASPPDVLGSRSGFGVQETQGIEPGPTGAREDG--GSGVVGEGIRGCAEWAVSFSGSLQQGITTVQTEHAVCVAPRNLGLDVP-PEGLEAFYSPCLPASGEAPRACPPLGGGKSSGVG-------KGGRGSGS--SRGRCFGPGVPPPPPRLFTFAAPGRSGAGTFYGACLSVFRPVSQWIGGE 592
BLAST of mRNA_D-dudresnayi_contig9917.28730.1 vs. uniprot
Match: D8LH29_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH29_ECTSI) HSP 1 Score: 147 bits (370), Expect = 3.920e-34 Identity = 122/308 (39.61%), Postives = 146/308 (47.40%), Query Frame = 1
Query: 1 DPRKVVYLLNYMLEVRRATSDKEEVSMGG-----------KRTFRLGLDEARLMFWLEVQVLFEMSAVMTPSREDMGKVYDKFFLRGSGFYVHELADGGQLKLPGRRSWDGHFAGLPDSCSGTVAGTGGSATESSERAENAASSSTASGAISASSEYFASASGGVVEVDAEEVSNGNGGVLASGEGRDVVGFDATTAAADRGTVDEKV----------VGAVPPPPTEKAPALPGSTSFASSTDGSITDGCLSSVGGXXXXXXXXXXXXKGRS--TLPIEMPSADLSKMFRASQRRVEETLNSGCFYR 855
DPRKVVYLLNYMLEVR A + +GG K + LDEARLMFWLEVQVLFEMSAVM PSR+DM KVYDKFF GSGFYVHEL D Q K+ RRSWDG +GLP G A S++ A+ A +++ G A G GG GEG D + TTA+ G P ++ +D S G + G R +LP+E +ADLSK+FRASQ +VEETL +GCFYR
Sbjct: 130 DPRKVVYLLNYMLEVRCAGTG----GVGGXXXXXXXXXXXKEAVIISLDEARLMFWLEVQVLFEMSAVMAPSRDDMSKVYDKFFRPGSGFYVHELTDTRQAKIRTRRSWDGDVSGLPS--------VGRKADPSAKTAKEVAQPXXXXXXXXXXXXXXVASTAGTGP--AASSLPGVGG----GEGLDAI----TTASXXXXXXXXXXXXXXXXXNIEAGEPPSXXXXXXXXXXXXSTEGGGSDVSAKHGAEAGENGTREGSGGTKPAVGARDWVSLPVEFLAADLSKIFRASQEKVEETLTAGCFYR 415 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9917.28730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9917.28730.1 >prot_D-dudresnayi_contig9917.28730.1 ID=prot_D-dudresnayi_contig9917.28730.1|Name=mRNA_D-dudresnayi_contig9917.28730.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=1216bp DPRKVVYLLNYMLEVRRATSDKEEVSMGGKRTFRLGLDEARLMFWLEVQVback to top mRNA from alignment at D-dudresnayi_contig9917:618..10896- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9917.28730.1 ID=mRNA_D-dudresnayi_contig9917.28730.1|Name=mRNA_D-dudresnayi_contig9917.28730.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=10279bp|location=Sequence derived from alignment at D-dudresnayi_contig9917:618..10896- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9917:618..10896- >mRNA_D-dudresnayi_contig9917.28730.1 ID=mRNA_D-dudresnayi_contig9917.28730.1|Name=mRNA_D-dudresnayi_contig9917.28730.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=7296bp|location=Sequence derived from alignment at D-dudresnayi_contig9917:618..10896- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |