mRNA_D-dudresnayi_contig986.28669.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig986.28669.1
Unique NamemRNA_D-dudresnayi_contig986.28669.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig986.28669.1 vs. uniprot
Match: A0A6H5LBB4_9PHAE (TsaA-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBB4_9PHAE)

HSP 1 Score: 669 bits (1726), Expect = 3.650e-231
Identity = 377/694 (54.32%), Postives = 461/694 (66.43%), Query Frame = 1 
Query:  139 NIYVLSSALVVGFALGNLIARRGEHERXXXXXXXXXXXXXXXXXXXQGKTKTCITKRAANRIARLQRAENTSTASTAEIQQGVARRNKSLPSSGQQQSTTKQQTSRRTRKRNKNLAPKDLALDAFIDIAGSCVSCVGAGGYQSLLLLPRAAFVLAGRFMQYDDCRESLITLGQARASTAGVHQLRILYVSCSWSSEDGAQGD-WTAEDYEMTYAFLERNPDLGYVYVGRSCVSGISNDS--MRATQLRHVPLVLLRADVLFVLP--PKAGRDEKASPSLPPKQPRRTMQMRYSDFRLFVRDSWSRMEFALAAVGQAKVYVAFRAAPFPKSVCELKPGRDNVQDITLEAVEGLRGAAAKVATPVAATAAVGDDGVLDDHSSTVSVGEGQEKTVEXXXXXXXXXXNIVAATIQEVCDNWLSSELNPLASLEEARAVVTAVEKSGDLELMQSIQGMRPMPPAFAKAARESLGEERMEGARELALSLLLFTVFCSQPKERATYTDGFMEDAGKVDIVYKPIAVVRSPYRERFGTPRQPQVTASVLHGGAQDGQIVFFKGHGYEEALQDLSGFDMIWIISHMHLNKGWNRKVRPPRLPEQRKGLFSTRSPHRPNPVALSSVRVDRVDTAKGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHAEQGDLLPKFSVGAALVHTVARATR 2205
            NI  LSSALVVG+A+G      G+ E                      +   C + R A R AR++++E+ S A  A +                            TR R K LAP+ LALDA+  +A S +  +G G Y+SLLLLPR  F++AGRF+ Y +CR+ L++LGQARA+TAGV QLR+LYVSCSW+S  G +G  W  +D+E T A+L+RNPDL +VYVGRSCV G S+ +  +R+TQLRHV   LLR+D + VLP   K+   E+ S S            RY+DF    R S SRM  A+AAVGQAKV+VAFRA  +P+SV EL+ G+ NV+    +AV+ LR AAAK   P  +TAAV                                        ++E C+NWL ++LNPL++LE+ARAVV   ++S D E +++IQ MRP P +FA  AR +LG+E +   RELALS+LLF V CSQ KERATYT+ F+ED GK++I Y P+AVVRSPYRERFGTPRQPQVTASVLHGGAQ+GQIVF +G GYEEALQDLSGFDMIW+++HMHLNKGWN KVRPPRLPE+RKGLFSTRSPHRPN +ALSS+RV RVD A GVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDH  QGD LPKFSVGA LVHT A + R
Sbjct:   11 NILALSSALVVGYAVGRFEGGGGKKET---------------------QQHPC-SVRGAKRRARIKKSEDNSRARAAGLASXXXXXXXXXXXXX---------XXXXTRSRKKKLAPRCLALDAWTRVARSYIKSIGEGDYESLLLLPRECFIVAGRFVPYAECRDQLVSLGQARAATAGVEQLRVLYVSCSWASAGGGEGTGWAVQDFETTRAYLQRNPDLSFVYVGRSCVVGSSSSTGHVRSTQLRHVAPALLRSDAVLVLPRLAKSPGGEEGSGST---------GTRYTDFECSARGSRSRMVLAIAAVGQAKVFVAFRAGSYPESVVELELGKSNVRATAKQAVDALRAAAAK--RPQKSTAAV----------------------------------------VEEACENWLGADLNPLSALEQARAVVEEAQRSDDGEALENIQSMRPAP-SFAANARAALGDEFIGEERELALSMLLFAVLCSQRKERATYTENFVEDVGKMEISYCPVAVVRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEALQDLSGFDMIWVLTHMHLNKGWNPKVRPPRLPEERKGLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHERQGDFLPKFSVGATLVHTDAGSKR 621
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BLAST of mRNA_D-dudresnayi_contig986.28669.1 vs. uniprot
Match: A0A835YNQ9_9STRA (TsaA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNQ9_9STRA)

HSP 1 Score: 217 bits (553), Expect = 7.190e-63
Identity = 102/166 (61.45%), Postives = 125/166 (75.30%), Query Frame = 1 
Query: 1657 IVYKPIAVVRSPYRERFGTPRQPQVTASVLHGGAQDGQIVFFKGHGYEEALQDLSGFDMIWIISHMHLNKGWNRKVRPPRLPEQRKGLFSTRSPHRPNPVALSSVRVDRVDTAKGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHAEQGDLLP 2154
            +V   I VVRSPY+ERFGTPRQ  VTA VL G AQ GQ+VF +G  +E AL+DL GFD +W+IS+MHLN+GWN KV+PPR P  ++GLFSTRSPHRPN +ALS+V++  VD     + V GLDLLDGTP+LDIKPY+ YCDAFP  K GWL+ L S   ++ D LP
Sbjct:    1 MVMDTIGVVRSPYKERFGTPRQANVTAGVLEGKAQHGQLVFSRGRNFEVALEDLDGFDYVWVISYMHLNQGWNPKVKPPRGPRVKRGLFSTRSPHRPNSIALSAVKIVSVDPKGLTVTVEGLDLLDGTPILDIKPYVPYCDAFPGAKTGWLEELSS--IDEVDYLP 164
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BLAST of mRNA_D-dudresnayi_contig986.28669.1 vs. uniprot
Match: A0A7S3XP01_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP01_HETAK)

HSP 1 Score: 203 bits (517), Expect = 1.170e-56
Identity = 109/204 (53.43%), Postives = 133/204 (65.20%), Query Frame = 1 
Query: 1594 SQPKERATYTDGFMEDAGKVDIVYKP------------------IAVVRSPYRERFGTPRQPQVTASVLHGGAQDGQIVFFKGHGYEEALQDLSGFDMIWIISHMHLNKGWNRKVRPPRLPEQRK-GLFSTRSPHRPNPVALSSVRVDRVDTAKGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHAEQGDL 2148
            SQP +    TD  +E A K D+  KP                  IAVVRSPY+ERFGTPRQP VT   L G AQ G+IVF K   +E ALQDL GF+  W+I++ HLNKGWN KV+PPR     K GLF+TRSPHRPNP+ LS+ ++  VD  +GV+ V GLDLLDGTPVLD+KPY+ Y DAFP+ +AGWL++  SD     DL
Sbjct:   35 SQPPD----TDRPVERAQKGDLTNKPQQFYTEQFTTPESVSMETIAVVRSPYKERFGTPRQPVVTKGTLGGSAQIGEIVFKKNRNFEIALQDLEGFEYCWLITYFHLNKGWNPKVKPPRGKHDAKLGLFATRSPHRPNPIGLSACKIHSVDHRQGVVRVAGLDLLDGTPVLDLKPYVPYADAFPHARAGWLNS--SDRVTVDDL 232
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BLAST of mRNA_D-dudresnayi_contig986.28669.1 vs. uniprot
Match: A0A0G4F040_VITBC (TsaA-like domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F040_VITBC)

HSP 1 Score: 192 bits (489), Expect = 1.830e-52
Identity = 100/189 (52.91%), Postives = 128/189 (67.72%), Query Frame = 1 
Query: 1630 FMEDAGKVDIV-YKPIAVVRSPYRERFGTPRQPQVTASVLHGGAQDGQIVFFKGHGYEEALQDLSGFDMIWIISHMHLNKGWNRKVR--PPRLPEQRKGLFSTRSPHRPNPVALSSVRVDRVDTAKGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDA------LGSDHAEQGDLLPKFSVG 2169
            + EDA   + +   PI VVRSPY+ERFGTPRQP VT   L G  Q+  +   +GHGYE  L+D+ GF+ +W+I++MHLN+GW  KVR  P +LP +R GLF+TR+PHRPN +ALS+V V  VD   G +++ GLDLLDGTPVLDIKPY+ Y DAFP+  AGWLD       +G D  E G  LP +  G
Sbjct:   77 YAEDADVPEAIEMHPIGVVRSPYKERFGTPRQPVVTEGTLGGVKQNATVQLLRGHGYEACLEDVEGFERVWLITYMHLNQGWRSKVRVYPRKLP-RRLGLFATRAPHRPNQLALSAVEVVGVDVDAGQLHILGLDLLDGTPVLDIKPYVPYADAFPDSAAGWLDQYDREQQMGRD--EFGHELPPWCAG 262
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BLAST of mRNA_D-dudresnayi_contig986.28669.1 vs. uniprot
Match: A0A7S2IIV7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IIV7_9EUKA)

HSP 1 Score: 190 bits (482), Expect = 6.760e-52
Identity = 90/167 (53.89%), Postives = 118/167 (70.66%), Query Frame = 1 
Query: 1618 YTDGFMEDAGKVDIVYKPIAVVRSPYRERFGTPRQPQVTASVLHGGAQDGQIVFFKGHGYEEALQDLSGFDMIWIISHMHLNKGWNRKVRPPRLPEQRKGLFSTRSPHRPNPVALSSVRVDRVDTAKGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDAL 2118
            YT+ F E A  +D+   PI  V SPY+ERFGTPRQP V+A    G   DG +V        +AL DL GF  +WI+S++HLN+GW  +V+PPR P+QR+GLF+TR+PHRPN + +S+V +  VD   G ++V GLDLLD TPVLD+KPYI YCD+ P+ KAGW+DAL
Sbjct:   66 YTEAFRESA-HLDVNLSPIGFVESPYKERFGTPRQPVVSALTAGGAMLDGCVVLRPD--LADALVDLEGFSHMWIVSYLHLNRGWKLRVKPPRGPKQRRGLFATRAPHRPNQLGMSAVEITAVDHIGGRVHVRGLDLLDHTPVLDLKPYIPYCDSIPDAKAGWVDAL 229
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BLAST of mRNA_D-dudresnayi_contig986.28669.1 vs. uniprot
Match: A0A6N6JQK0_9BACT (tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO n=3 Tax=Bacteria TaxID=2 RepID=A0A6N6JQK0_9BACT)

HSP 1 Score: 186 bits (473), Expect = 2.400e-51
Identity = 85/156 (54.49%), Postives = 114/156 (73.08%), Query Frame = 1 
Query: 1672 IAVVRSPYRERFGTPRQPQVTASVLHGGAQDGQIVFFKGHGYEEALQDLSGFDMIWIISHMHLNKGWNRKVRPPRLPEQRKGLFSTRSPHRPNPVALSSVRVDRVDTAKGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHAEQ 2139
            I  VRSPY+ERFGTPRQP VTA  L   A D +I       +E+ALQDL GF+ IW+++ +HLN GWN +V PPR P+ ++GLF+TR+PHRPNP+ LS++R+ RV+    V++V G+DLLDGTPVLD+KPY+ Y DAF   +AGWL+ L  D  ++
Sbjct:   25 IGHVRSPYKERFGTPRQPVVTAQTLEDRALDARIELLPAMNFEQALQDLEGFEYIWVLAWLHLNSGWNPQVMPPRGPKVKRGLFATRAPHRPNPIGLSALRLIRVEGR--VLHVRGIDLLDGTPVLDVKPYVPYSDAFAAARAGWLEGLAQDEGDR 178
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BLAST of mRNA_D-dudresnayi_contig986.28669.1 vs. uniprot
Match: R1DL83_EMIHU (TsaA-like domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DL83_EMIHU)

HSP 1 Score: 190 bits (483), Expect = 3.160e-51
Identity = 94/176 (53.41%), Postives = 118/176 (67.05%), Query Frame = 1 
Query: 1618 YTDGFMEDAGKVDIVYKPIAVVRSPYRERFGTPRQPQVTASVLHGGAQDGQIVFFKGHGYEEALQDLSGFDMIWIISHMHLNKGWNRKVRPPRLPEQRK-GLFSTRSPHRPNPVALSSVRVDRVDTAKGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHAEQG 2142
            YTD F + A    +   PI V+RSPY+ERFGTPRQP VT  V  GGAQ G I      G +  L+ L+GFD  W I+ MHLN GW   VRPPR P + K G+F+TR+PHRPNP+ALS+++V  VD A   + V GLDLLDGTPVLD+KPY+ Y D+FP  KAGW+D + ++    G
Sbjct:   32 YTDAFADHAA-APVTLTPIGVIRSPYKERFGTPRQPTVTTQVSGGGAQRGCIELRPDAGLDHTLRGLAGFDYCWAITLMHLNAGWKPLVRPPRGPRRAKQGVFATRAPHRPNPIALSALKVVEVDEAALRVTVEGLDLLDGTPVLDLKPYVPYADSFPRAKAGWVDEVRAEEDRLG 206
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BLAST of mRNA_D-dudresnayi_contig986.28669.1 vs. uniprot
Match: A0A7S3A0C0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A0C0_9RHOD)

HSP 1 Score: 186 bits (471), Expect = 2.790e-50
Identity = 84/147 (57.14%), Postives = 105/147 (71.43%), Query Frame = 1 
Query: 1672 IAVVRSPYRERFGTPRQPQVTASVLHGGAQDGQIVFFKGHGYEEALQDLSGFDMIWIISHMHLNKGWNRKVRPPRLPEQRKGLFSTRSPHRPNPVALSSVRVDRVDTAKGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLD 2112
            I VVRSPY+ERFGTPRQ  V    +    QDG+I       YE AL+ L GFD  W+I  MHLN GWN  V PPR P  ++G+F+TR+PHRPNP++LS++++ RVD    +++V GLDLLDGTP+LDIKPY+ Y DAFPN  AGWLD
Sbjct:   53 IGVVRSPYKERFGTPRQATVWEQSIGNAPQDGEIHLIGDPRYEHALRGLDGFDYCWVICWMHLNTGWNPLVTPPRGPRTKQGIFATRAPHRPNPISLSALKITRVDYKNRIVHVKGLDLLDGTPILDIKPYVPYADAFPNAAAGWLD 199
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BLAST of mRNA_D-dudresnayi_contig986.28669.1 vs. uniprot
Match: A0A7S1WEL1_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WEL1_ALECA)

HSP 1 Score: 184 bits (467), Expect = 5.360e-50
Identity = 85/173 (49.13%), Postives = 120/173 (69.36%), Query Frame = 1 
Query: 1618 YTDGFMEDAGKVDIVYKPIAVVRSPYRERFGTPRQPQVTASVLHGGAQDGQIVFFKGHGYEEAL--QDLSGFDMIWIISHMHLNKGWNRKVRPPRLPEQRKGLFSTRSPHRPNPVALSSVRVDRVDTAKGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDH 2130
            +TD F      + +  + I VVRSPY+ERFG PRQP ++  VL G AQ+G I F      + AL  +DL GF+ IWI+ ++HLN+GW+ +V PPR   Q++GLF+TRSPHRPN ++LS+ ++  VD     + V GLDLLDGTPVLD+KPY+ YCD++P+ +AGW+D +  +H
Sbjct:   31 HTDAFPTP---LQVTLRTIGVVRSPYKERFGCPRQPPISKGVLGGSAQEGTIQFLDNPDGDIALALKDLEGFERIWIVGYLHLNEGWSPRVTPPRGARQKRGLFATRSPHRPNHISLSACQLLSVDAKAKTLTVRGLDLLDGTPVLDVKPYVPYCDSYPSARAGWIDEVEGEH 200
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BLAST of mRNA_D-dudresnayi_contig986.28669.1 vs. uniprot
Match: A0A2V3J262_9FLOR (tRNA (Adenine(37)-N6)-methyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J262_9FLOR)

HSP 1 Score: 185 bits (469), Expect = 1.510e-49
Identity = 90/170 (52.94%), Postives = 118/170 (69.41%), Query Frame = 1 
Query: 1618 YTDGFMEDAGKVDIVYKPIAVVRSPYRERFGTPRQPQVTASVLHGGAQDGQIVFFKGHGYEEALQDLSGFDMIWIISHMHLNKGWNRKVRPPRLPEQRKGLFSTRSPHRPNPVALSSVRVDRVDTAKGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSD 2127
            YTD F E   +V +    I VVRS Y+ERFGTPRQP VT + L    Q   I  ++   Y+ AL+ L+ F+  W+IS+ HLN+G+N  V PPR P +++G+F+TRSPHRPN + LS +R+  VD  KG+I+V G+DLLDGTPVLD+KPY+ YCD+FP  KAGWLD L  D
Sbjct:   55 YTDDF-ETPTQVSL--NTIGVVRSLYKERFGTPRQPNVTKNTLGNQMQPATIQLYESCKYDLALRGLAQFEYCWVISYFHLNQGFNPLVTPPRGPRKKQGVFATRSPHRPNSIGLSCIRITGVDEKKGLIHVLGVDLLDGTPVLDVKPYVPYCDSFPKAKAGWLDTLRED 221
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig986.28669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LBB4_9PHAE3.650e-23154.32TsaA-like domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YNQ9_9STRA7.190e-6361.45TsaA-like domain-containing protein n=1 Tax=Tribon... [more]
A0A7S3XP01_HETAK1.170e-5653.43Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4F040_VITBC1.830e-5252.91TsaA-like domain-containing protein n=2 Tax=Vitrel... [more]
A0A7S2IIV7_9EUKA6.760e-5253.89Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A6N6JQK0_9BACT2.400e-5154.49tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyl... [more]
R1DL83_EMIHU3.160e-5153.41TsaA-like domain-containing protein n=1 Tax=Emilia... [more]
A0A7S3A0C0_9RHOD2.790e-5057.14Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S1WEL1_ALECA5.360e-5049.13Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A2V3J262_9FLOR1.510e-4952.94tRNA (Adenine(37)-N6)-methyltransferase n=1 Tax=Gr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig986contigD-dudresnayi_contig986:23112..26701 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score690.3
Seed ortholog evalue9.9e-196
Seed eggNOG ortholog2880.D7FI01
EggNOG free text desc.tRNA (adenine-N6-)-methyltransferase activity
EggNOG OGsCOG1720@1,KOG2942@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionTsaA-like domain
Ec32 orthologEc-12_006540.1
Exons4
Model size2293
Cds size2166
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig986.28669.1prot_D-dudresnayi_contig986.28669.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig986 23232..26694 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930945.1963613-UTR-D-dudresnayi_contig986:23111..232311622930945.1963613-UTR-D-dudresnayi_contig986:23111..23231Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig986 23112..23231 +
1690557975.2254965-UTR-D-dudresnayi_contig986:23111..232311690557975.2254965-UTR-D-dudresnayi_contig986:23111..23231Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig986 23112..23231 +
1622930945.271226-UTR-D-dudresnayi_contig986:26694..267011622930945.271226-UTR-D-dudresnayi_contig986:26694..26701Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig986 26695..26701 +
1690557975.2800503-UTR-D-dudresnayi_contig986:26694..267011690557975.2800503-UTR-D-dudresnayi_contig986:26694..26701Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig986 26695..26701 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930945.2129788-CDS-D-dudresnayi_contig986:23231..249091622930945.2129788-CDS-D-dudresnayi_contig986:23231..24909Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig986 23232..24909 +
1690557975.2393668-CDS-D-dudresnayi_contig986:23231..249091690557975.2393668-CDS-D-dudresnayi_contig986:23231..24909Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig986 23232..24909 +
1622930945.2255557-CDS-D-dudresnayi_contig986:25277..255141622930945.2255557-CDS-D-dudresnayi_contig986:25277..25514Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig986 25278..25514 +
1690557975.2471938-CDS-D-dudresnayi_contig986:25277..255141690557975.2471938-CDS-D-dudresnayi_contig986:25277..25514Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig986 25278..25514 +
1622930945.241736-CDS-D-dudresnayi_contig986:25871..259051622930945.241736-CDS-D-dudresnayi_contig986:25871..25905Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig986 25872..25905 +
1690557975.2553542-CDS-D-dudresnayi_contig986:25871..259051690557975.2553542-CDS-D-dudresnayi_contig986:25871..25905Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig986 25872..25905 +
1622930945.257179-CDS-D-dudresnayi_contig986:26477..266941622930945.257179-CDS-D-dudresnayi_contig986:26477..26694Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig986 26478..26694 +
1690557975.2713485-CDS-D-dudresnayi_contig986:26477..266941690557975.2713485-CDS-D-dudresnayi_contig986:26477..26694Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig986 26478..26694 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig986.28669.1

>prot_D-dudresnayi_contig986.28669.1 ID=prot_D-dudresnayi_contig986.28669.1|Name=mRNA_D-dudresnayi_contig986.28669.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=722bp
MVLSTVNIYVLSSALVVGFALGNLIARRGEHERQQQQQQQQQQEEEAQEE
EEQGKTKTCITKRAANRIARLQRAENTSTASTAEIQQGVARRNKSLPSSG
QQQSTTKQQTSRRTRKRNKNLAPKDLALDAFIDIAGSCVSCVGAGGYQSL
LLLPRAAFVLAGRFMQYDDCRESLITLGQARASTAGVHQLRILYVSCSWS
SEDGAQGDWTAEDYEMTYAFLERNPDLGYVYVGRSCVSGISNDSMRATQL
RHVPLVLLRADVLFVLPPKAGRDEKASPSLPPKQPRRTMQMRYSDFRLFV
RDSWSRMEFALAAVGQAKVYVAFRAAPFPKSVCELKPGRDNVQDITLEAV
EGLRGAAAKVATPVAATAAVGDDGVLDDHSSTVSVGEGQEKTVEEKEEEE
EEEKNIVAATIQEVCDNWLSSELNPLASLEEARAVVTAVEKSGDLELMQS
IQGMRPMPPAFAKAARESLGEERMEGARELALSLLLFTVFCSQPKERATY
TDGFMEDAGKVDIVYKPIAVVRSPYRERFGTPRQPQVTASVLHGGAQDGQ
IVFFKGHGYEEALQDLSGFDMIWIISHMHLNKGWNRKVRPPRLPEQRKGL
FSTRSPHRPNPVALSSVRVDRVDTAKGVIYVHGLDLLDGTPVLDIKPYIG
YCDAFPNVKAGWLDALGSDHAEQGDLLPKFSVGAALVHTVARATRADVVE
NCAGPDEAVLGTAFQGSSGTS*
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mRNA from alignment at D-dudresnayi_contig986:23112..26701+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig986.28669.1 ID=mRNA_D-dudresnayi_contig986.28669.1|Name=mRNA_D-dudresnayi_contig986.28669.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3590bp|location=Sequence derived from alignment at D-dudresnayi_contig986:23112..26701+ (Desmarestia dudresnayi DdudBR16 monoicous)
GTGTTCGTTGTGCTCACCTCCTTGGCCACGACACGGCATGTGATATCGAA
GTAGTGCAAGTCAAAGGTATCACTTACGTGCCGCCCTATTTAGCTGGCCT
GCGCACTCATCACTATCAAAATGGTCCTATCAACCGTCAATATCTACGTG
CTATCTTCGGCATTGGTCGTTGGATTTGCACTGGGCAATCTTATCGCTCG
ACGAGGAGAACATGAACGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGG
AGGAGGAGGCGCAAGAGGAGGAGGAGCAAGGAAAAACGAAAACATGTATA
ACCAAGAGGGCAGCTAACCGCATAGCACGTTTGCAACGTGCTGAAAATAC
TTCTACCGCTTCCACTGCAGAAATACAGCAAGGAGTGGCACGACGTAACA
AATCACTCCCATCATCTGGGCAACAACAAAGTACGACCAAGCAGCAAACC
TCACGCCGAACGCGCAAGCGAAACAAGAACCTCGCGCCCAAGGACCTAGC
TCTCGATGCCTTCATCGACATCGCGGGATCCTGCGTCTCTTGTGTTGGTG
CGGGTGGTTACCAATCGCTGTTGCTCCTGCCGAGAGCAGCGTTCGTGTTG
GCTGGCCGCTTCATGCAGTATGACGACTGCCGCGAGAGTCTCATCACGCT
CGGGCAAGCACGGGCTTCGACAGCAGGCGTCCACCAGCTTCGCATCCTCT
ACGTAAGCTGCTCCTGGTCCAGCGAGGACGGTGCGCAGGGAGACTGGACG
GCGGAGGACTACGAGATGACATACGCCTTCCTAGAGCGTAACCCCGACCT
AGGATATGTCTATGTCGGGCGTTCCTGCGTGTCCGGCATCTCTAACGACT
CGATGAGGGCCACGCAGCTTCGACATGTGCCGTTGGTCCTGCTGCGTGCG
GACGTGCTGTTTGTTCTCCCACCCAAAGCGGGGCGCGATGAAAAAGCTTC
ACCATCCTTGCCCCCCAAACAACCGCGACGGACTATGCAGATGCGGTACA
GTGATTTCAGGTTGTTCGTGCGAGACTCGTGGTCCCGAATGGAGTTCGCC
TTGGCGGCTGTAGGCCAAGCGAAGGTCTACGTTGCATTCCGCGCGGCACC
GTTCCCCAAGTCCGTGTGCGAGCTCAAGCCAGGGAGAGATAATGTCCAAG
ATATAACTCTGGAGGCAGTGGAAGGTCTGAGGGGTGCTGCAGCGAAGGTG
GCTACCCCTGTTGCAGCAACCGCCGCCGTAGGCGACGATGGCGTGTTAGA
CGACCACAGTTCAACAGTATCAGTAGGAGAAGGGCAAGAGAAGACGGTGG
AAGAGAAGGAGGAGGAGGAGGAGGAGGAGAAAAACATTGTTGCGGCGACA
ATACAAGAGGTTTGCGATAACTGGCTCAGTTCCGAGCTGAACCCTCTCGC
GTCGCTCGAAGAGGCCAGAGCCGTGGTGACCGCGGTGGAGAAATCAGGCG
ACCTCGAGCTCATGCAGAGCATACAGGGCATGCGGCCAATGCCGCCTGCG
TTTGCCAAGGCTGCGAGAGAGTCGTTGGGCGAGGAGCGCATGGAAGGAGC
TAGAGAACTAGCTCTGTCTTTGCTGTTGTTTACTGTGTTCTGTTCGCAAC
CGAAAGAGCGGGCGACGTACACGGATGGGTTTATGGAGGATGCCGGAAAG
GTGGACATAGTGTACAAGCCAATCGCGGTGGTGAGGAGCCCATACCGGGA
GAGGTTCGGCACACCGCGGCAGCCGCAGGTGACCGCCTCGGTGCTGCATG
GGGGCGCTCAGGATGGACAGATTGTGTTCTTCAAGGGGCATGGCTATGGT
GGGTACTGGCTAATTTAGGCAGGGTGTATTTGTGATATCCTTGTCAAGAG
TAGGTGTTGTTCAATTGTTGGCCGTGTGGCAATGTGGGTAACTTTGCGGA
ATATTTCTGTTTTACAGGGCATACCATAATACAGTGTACGCGCATGATAC
GGTGGAAACTAGGTCATTATACGAAGCTTTTACCAGCGCGTCGAGGCGTC
ATCATTGTGTACCTGCAACTATCCCTTTAAGCTTTCCTACTACCACAGTT
GGCTCCCCACTTTTGAACGTCTTCCTTTTGGCGCGCTGTGCGTGTCTTGC
TGAACAAAGCCCACGCCCTGTGGCATGCCGTTGCTTCACCTTTTATTGTG
TCGGCCTTCGTCGCAGAGGAAGCCTTGCAAGACTTGAGCGGTTTCGACAT
GATATGGATCATTTCCCACATGCACCTCAACAAGGGGTGGAACCGAAAGG
TCCGCCCCCCGCGGCTTCCAGAGCAGCGCAAGGGCCTCTTCTCGACCCGA
AGCCCCCACCGTCCCAACCCCGTGGCACTTTCATCCGTACGAGTTGATCG
GGTAGATACCGCTAAAGGCGTGATCTACGTACATGGGTTGGACCTTCTCG
ACGGTGAGCAAGGCGGAAGTAATGTAAGGTGGCGGGAACACGCAGCAAGC
CATGGGTTATGTTCAGGTGTCATGGCTTACGTCCATGCGTTCCTTGCGGG
TCTCGATCTGGAGATATGGCTGCTTGATGTTTTTATATGTGTTTTGTTTA
CAGCAGGGTCTCCATATGCATGTATGTGTGTACACGATGCTTGTTTCGTC
CGCGAAAATTGATAGCGCAGTATGCGGCAGGGGAATATTGTTTTTTTTTG
CGTTGTCATATATACGTTTGGCGAGGTTCCGTCGATTGTTTTCGTGCGTC
AAAACCGCCTTTGCCATGACATGTGTGTGCCTTTCGTGGCTGTCGTCGTG
CTTGTGGCAGGTACTCCGGTTCTGGATATCAAGCCGTACATCGGGTGAGT
TTCCCCCATGATCTGGCTATGGCGACGCCACCGCTGTGTACAGTTGTTAG
CTGGGTTTGATATGTAACAGTACTGTATGTCTTTGCCTTTACAACCAAAG
GGGAGTTTGGGTGAACAACACACGGAAGCCCAAGTCTGGGAGTATGACCA
GCCATCGCCGAGGCATCCCGTGTGGGACCCTCGGTCAAGCATACTCCATC
TATATACTCATAACACTTCTAACTTGACGGGGTAAAGTTTCAGCTTCCAA
TAAGTTTGTTTATTTCGCGGTTTTGATGATTTGCATTTCAGTTCTGTGCA
CATATGTATACTGTTTTGTGTTCAACGTTGAAAGGCTTCTTTTAAATTCC
TCAATGTAGTAACTCTTCACGTTCAAGTCCGTTTGTTGCTTTCTTGGGTG
ATGGAGGTTTCGGTTTCATGCGCATTTACTGTGATGCGGTATTCAAGTCC
TAGACCGTGACCGTGACCGCTGACCGTATGGGGTACTTGCGGTTGAACGA
ATAGTGAAGTGTGTCTGTTTGCTACCTCCTGTTGGCGCGTCCCTTCCGCC
TTTTGCGTCGTGACAGGTACTGCGACGCCTTCCCCAACGTGAAGGCGGGG
TGGCTCGATGCGCTTGGGTCGGACCACGCGGAGCAGGGGGATTTATTGCC
CAAGTTCAGCGTCGGTGCTGCGCTTGTGCATACCGTCGCCCGCGCGACAA
GAGCTGACGTTGTCGAAAACTGTGCTGGTCCGGACGAGGCGGTCTTGGGG
ACTGCTTTCCAAGGGTCTTCGGGTACTTCCTAGAAATTAG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig986:23112..26701+

>mRNA_D-dudresnayi_contig986.28669.1 ID=mRNA_D-dudresnayi_contig986.28669.1|Name=mRNA_D-dudresnayi_contig986.28669.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=4332bp|location=Sequence derived from alignment at D-dudresnayi_contig986:23112..26701+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGTCCTATCAACCGTCAATATCTACGTGCTATCTTCGGCATTGGTCGT
TGGATTTGCACTGGGCAATCTTATCGCTCGACGAGGAGAACATGAACGGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGAGGAGGCGCAAGAGGAG
GAGGAGCAAGGAAAAACGAAAACATGTATAACCAAGAGGGCAGCTAACCG
CATAGCACGTTTGCAACGTGCTGAAAATACTTCTACCGCTTCCACTGCAG
AAATACAGCAAGGAGTGGCACGACGTAACAAATCACTCCCATCATCTGGG
CAACAACAAAGTACGACCAAGCAGCAAACCTCACGCCGAACGCGCAAGCG
AAACAAGAACCTCGCGCCCAAGGACCTAGCTCTCGATGCCTTCATCGACA
TCGCGGGATCCTGCGTCTCTTGTGTTGGTGCGGGTGGTTACCAATCGCTG
TTGCTCCTGCCGAGAGCAGCGTTCGTGTTGGCTGGCCGCTTCATGCAGTA
TGACGACTGCCGCGAGAGTCTCATCACGCTCGGGCAAGCACGGGCTTCGA
CAGCAGGCGTCCACCAGCTTCGCATCCTCTACGTAAGCTGCTCCTGGTCC
AGCGAGGACGGTGCGCAGGGAGACTGGACGGCGGAGGACTACGAGATGAC
ATACGCCTTCCTAGAGCGTAACCCCGACCTAGGATATGTCTATGTCGGGC
GTTCCTGCGTGTCCGGCATCTCTAACGACTCGATGAGGGCCACGCAGCTT
CGACATGTGCCGTTGGTCCTGCTGCGTGCGGACGTGCTGTTTGTTCTCCC
ACCCAAAGCGGGGCGCGATGAAAAAGCTTCACCATCCTTGCCCCCCAAAC
AACCGCGACGGACTATGCAGATGCGGTACAGTGATTTCAGGTTGTTCGTG
CGAGACTCGTGGTCCCGAATGGAGTTCGCCTTGGCGGCTGTAGGCCAAGC
GAAGGTCTACGTTGCATTCCGCGCGGCACCGTTCCCCAAGTCCGTGTGCG
AGCTCAAGCCAGGGAGAGATAATGTCCAAGATATAACTCTGGAGGCAGTG
GAAGGTCTGAGGGGTGCTGCAGCGAAGGTGGCTACCCCTGTTGCAGCAAC
CGCCGCCGTAGGCGACGATGGCGTGTTAGACGACCACAGTTCAACAGTAT
CAGTAGGAGAAGGGCAAGAGAAGACGGTGGAAGAGAAGGAGGAGGAGGAG
GAGGAGGAGAAAAACATTGTTGCGGCGACAATACAAGAGGTTTGCGATAA
CTGGCTCAGTTCCGAGCTGAACCCTCTCGCGTCGCTCGAAGAGGCCAGAG
CCGTGGTGACCGCGGTGGAGAAATCAGGCGACCTCGAGCTCATGCAGAGC
ATACAGGGCATGCGGCCAATGCCGCCTGCGTTTGCCAAGGCTGCGAGAGA
GTCGTTGGGCGAGGAGCGCATGGAAGGAGCTAGAGAACTAGCTCTGTCTT
TGCTGTTGTTTACTGTGTTCTGTTCGCAACCGAAAGAGCGGGCGACGTAC
ACGGATGGGTTTATGGAGGATGCCGGAAAGGTGGACATAGTGTACAAGCC
AATCGCGGTGGTGAGGAGCCCATACCGGGAGAGGTTCGGCACACCGCGGC
AGCCGCAGGTGACCGCCTCGGTGCTGCATGGGGGCGCTCAGGATGGACAG
ATTGTGTTCTTCAAGGGGCATGGCTATGATGGTCCTATCAACCGTCAATA
TCTACGTGCTATCTTCGGCATTGGTCGTTGGATTTGCACTGGGCAATCTT
ATCGCTCGACGAGGAGAACATGAACGGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGGAGGAGGAGGCGCAAGAGGAGGAGGAGCAAGGAAAAACGAAAA
CATGTATAACCAAGAGGGCAGCTAACCGCATAGCACGTTTGCAACGTGCT
GAAAATACTTCTACCGCTTCCACTGCAGAAATACAGCAAGGAGTGGCACG
ACGTAACAAATCACTCCCATCATCTGGGCAACAACAAAGTACGACCAAGC
AGCAAACCTCACGCCGAACGCGCAAGCGAAACAAGAACCTCGCGCCCAAG
GACCTAGCTCTCGATGCCTTCATCGACATCGCGGGATCCTGCGTCTCTTG
TGTTGGTGCGGGTGGTTACCAATCGCTGTTGCTCCTGCCGAGAGCAGCGT
TCGTGTTGGCTGGCCGCTTCATGCAGTATGACGACTGCCGCGAGAGTCTC
ATCACGCTCGGGCAAGCACGGGCTTCGACAGCAGGCGTCCACCAGCTTCG
CATCCTCTACGTAAGCTGCTCCTGGTCCAGCGAGGACGGTGCGCAGGGAG
ACTGGACGGCGGAGGACTACGAGATGACATACGCCTTCCTAGAGCGTAAC
CCCGACCTAGGATATGTCTATGTCGGGCGTTCCTGCGTGTCCGGCATCTC
TAACGACTCGATGAGGGCCACGCAGCTTCGACATGTGCCGTTGGTCCTGC
TGCGTGCGGACGTGCTGTTTGTTCTCCCACCCAAAGCGGGGCGCGATGAA
AAAGCTTCACCATCCTTGCCCCCCAAACAACCGCGACGGACTATGCAGAT
GCGGTACAGTGATTTCAGGTTGTTCGTGCGAGACTCGTGGTCCCGAATGG
AGTTCGCCTTGGCGGCTGTAGGCCAAGCGAAGGTCTACGTTGCATTCCGC
GCGGCACCGTTCCCCAAGTCCGTGTGCGAGCTCAAGCCAGGGAGAGATAA
TGTCCAAGATATAACTCTGGAGGCAGTGGAAGGTCTGAGGGGTGCTGCAG
CGAAGGTGGCTACCCCTGTTGCAGCAACCGCCGCCGTAGGCGACGATGGC
GTGTTAGACGACCACAGTTCAACAGTATCAGTAGGAGAAGGGCAAGAGAA
GACGGTGGAAGAGAAGGAGGAGGAGGAGGAGGAGGAGAAAAACATTGTTG
CGGCGACAATACAAGAGGTTTGCGATAACTGGCTCAGTTCCGAGCTGAAC
CCTCTCGCGTCGCTCGAAGAGGCCAGAGCCGTGGTGACCGCGGTGGAGAA
ATCAGGCGACCTCGAGCTCATGCAGAGCATACAGGGCATGCGGCCAATGC
CGCCTGCGTTTGCCAAGGCTGCGAGAGAGTCGTTGGGCGAGGAGCGCATG
GAAGGAGCTAGAGAACTAGCTCTGTCTTTGCTGTTGTTTACTGTGTTCTG
TTCGCAACCGAAAGAGCGGGCGACGTACACGGATGGGTTTATGGAGGATG
CCGGAAAGGTGGACATAGTGTACAAGCCAATCGCGGTGGTGAGGAGCCCA
TACCGGGAGAGGTTCGGCACACCGCGGCAGCCGCAGGTGACCGCCTCGGT
GCTGCATGGGGGCGCTCAGGATGGACAGATTGTGTTCTTCAAGGGGCATG
GCTATGAGGAAGCCTTGCAAGACTTGAGCGGTTTCGACATGATATGGATC
ATTTCCCACATGCACCTCAACAAGGGGTGGAACCGAAAGGTCCGCCCCCC
GCGGCTTCCAGAGCAGCGCAAGGGCCTCTTCTCGACCCGAAGCCCCCACC
GTCCCAACCCCGTGGCACTTTCATCCGTACGAGTTGATCGGGTAGATACC
GCTAAAGGCGTGATCTACGTACATGGGTTGGACCTTCTCGACGAGGAAGC
CTTGCAAGACTTGAGCGGTTTCGACATGATATGGATCATTTCCCACATGC
ACCTCAACAAGGGGTGGAACCGAAAGGTCCGCCCCCCGCGGCTTCCAGAG
CAGCGCAAGGGCCTCTTCTCGACCCGAAGCCCCCACCGTCCCAACCCCGT
GGCACTTTCATCCGTACGAGTTGATCGGGTAGATACCGCTAAAGGCGTGA
TCTACGTACATGGGTTGGACCTTCTCGACGGTACTCCGGTTCTGGATATC
AAGCCGTACATCGGGTACTCCGGTTCTGGATATCAAGCCGTACATCGGGT
ACTGCGACGCCTTCCCCAACGTGAAGGCGGGGTGGCTCGATGCGCTTGGG
TCGGACCACGCGGAGCAGGGGGATTTATTGCCCAAGTTCAGCGTCGGTGC
TGCGCTTGTGCATACCGTCGCCCGCGCGACAAGAGCTGACGTTGTCGAAA
ACTGTGCTGGTCCGGACGAGGCGGTCTTGGGGACTGCTTTCCAAGGGTCT
TCGGGTACTTCCTAGGTACTGCGACGCCTTCCCCAACGTGAAGGCGGGGT
GGCTCGATGCGCTTGGGTCGGACCACGCGGAGCAGGGGGATTTATTGCCC
AAGTTCAGCGTCGGTGCTGCGCTTGTGCATACCGTCGCCCGCGCGACAAG
AGCTGACGTTGTCGAAAACTGTGCTGGTCCGGACGAGGCGGTCTTGGGGA
CTGCTTTCCAAGGGTCTTCGGGTACTTCCTAG
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