mRNA_D-dudresnayi_contig9859.28666.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9859.28666.1
Unique NamemRNA_D-dudresnayi_contig9859.28666.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9859.28666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9859contigD-dudresnayi_contig9859:1904..3589 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons3
Model size391
Cds size387
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9859.28666.1prot_D-dudresnayi_contig9859.28666.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9859 1906..3589 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930944.7160387-CDS-D-dudresnayi_contig9859:1905..21791622930944.7160387-CDS-D-dudresnayi_contig9859:1905..2179Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9859 1906..2179 -
1690557975.0576694-CDS-D-dudresnayi_contig9859:1905..21791690557975.0576694-CDS-D-dudresnayi_contig9859:1905..2179Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9859 1906..2179 -
1622930944.7349758-CDS-D-dudresnayi_contig9859:3142..32041622930944.7349758-CDS-D-dudresnayi_contig9859:3142..3204Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9859 3143..3204 -
1690557975.0664504-CDS-D-dudresnayi_contig9859:3142..32041690557975.0664504-CDS-D-dudresnayi_contig9859:3142..3204Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9859 3143..3204 -
1622930944.7591205-CDS-D-dudresnayi_contig9859:3538..35891622930944.7591205-CDS-D-dudresnayi_contig9859:3538..3589Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9859 3539..3589 -
1690557975.0756655-CDS-D-dudresnayi_contig9859:3538..35891690557975.0756655-CDS-D-dudresnayi_contig9859:3538..3589Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9859 3539..3589 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9859.28666.1

>prot_D-dudresnayi_contig9859.28666.1 ID=prot_D-dudresnayi_contig9859.28666.1|Name=mRNA_D-dudresnayi_contig9859.28666.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=129bp
TVRATARKDARMWMTPKLARTRRRLATATRMPPMASNRMGLPMATMLRRR
IQTMIKRPKASRTLGARNMMMMVAMIVMMKMKTSRERGCVRVDELDGDAS
MTDSCCGYNQLLYSFVTIIAIFFYKIVGR
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mRNA from alignment at D-dudresnayi_contig9859:1904..3589-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9859.28666.1 ID=mRNA_D-dudresnayi_contig9859.28666.1|Name=mRNA_D-dudresnayi_contig9859.28666.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1686bp|location=Sequence derived from alignment at D-dudresnayi_contig9859:1904..3589- (Desmarestia dudresnayi DdudBR16 monoicous)
ACCGTAAGGGCAACCGCGAGGAAGGACGCGAGGATGTGGATGACGCCGAA
GGTAACTTGGTCGACCTGTTGATGTTTATTTTTGGGATACTGATAGTAGA
TGTTGGTGTATGTGTTTGTGACTGTGTGTTTCGCCACTCGACTCTTGAGT
TTACGTTTTTGAGATACGATAGCTAAACTGGTCAATTTTTGATGGATTAC
GCGTGTTGCCCTCTTTTGAGGACGGTGTAGTATTGCCGAGGTAGTTCTCT
ACCGTGCGTTGGATACAACATTAGTTTCTGATACACGAGAAATAGGCGTT
TCGGTGGGACCTCAACATCTCTTTTTGCATATATTTTGCGTTTTTTTTGG
AAACTTGTCGTGTTACCTGTTTTTTTGCTATACAGCTGGCGAGGACCAGG
CGGAGGCTAGCGACAGCGACGAGAATGCCGCCAATGGCAAGCAACAGGTA
GCCCTCGAGTTCGATTCTTGCCATTCTATCATGTTTTTTATTGGTCATTG
TGAACATATGGCCTATTGTCGTGTACATGTGTGTGTGTGTGTGTGTGTGT
GTTTTCCGTCCCATTTATTATCTTCGCCCGATTCTTTCTCTAGCTCCGTC
TCTCTTCGTAACTCAGATCCGGGGTCACATAGCAGGCGCTCCTCCCGCCT
TCCCACTACGGTACGTGCCTACATTTTTGCCGCGAAAAGAGTGCAAGCAC
TTTCTTCCCTCGTCGACTTTCATCGAATTGTGCTTACTCACGCTCTCGCG
TTTTCCGCGACGGAAGATGGCACAGAAAAGTGCCACCGGTGATCGAACCC
CCAACTTCCGCCAGCAGAGGCGAACACCCTAACCACTAGACCATTGATGC
GTGTGCGTGATATATCCGACGTAAGTACTGGGGTGGTAGGGGGTTGGGGT
CGGAAAGGGAGGACAGCTGTCAGTGACCGCGGCTTGCTCAGACAGGCACG
CTGAGCGATGGGCAGAAGAGCCCCTGAGGTGGAGTTGGAAGTGAACGCGA
TGAATAAAAAAACGTAATAAAAATGACGTGGAGACGAAGGGATGACAACA
AATGGTCACGTGCCTTATGGTGGTTCACATTGCTTGTCCGAAATGTTGCC
TCCTTAGGCGTCCAGTCAAATGAGTCCACAAGCATTTCATTGGTAGAAAA
TCGAAAATGAGAGCTGGGACACGATAAGACCGACCCCATACGTGTTCATA
AAGCCGCTTTTTTGAACAGGGGCCCTTTGGGGAATTTGTACACTTTTCTC
CACTAATTGTCTATGAGTCCCCCAAGGACCCCTTTTGTAGAAATATTGAC
TTGTTGCAGATAGCCTATGCAAGATACACGTTTTGGAACTTGAACACAGT
AGTCACAGCATTTCATTTGGTCAACCATTTTTGGCGGTGATCGCTATGCT
GTAACGGCAGAATGGGGCTGCCAATGGCCACCATGCTGAGGAGGAGGATT
CAGACCATGATCAAGAGGCCGAAGGCGTCAAGAACTCTCGGGGCGAGGAA
TATGATGATGATGGTGGCGATGATAGTGATGATGAAGATGAAGACTAGCC
GCGAGAGGGGATGTGTGCGTGTGGATGAACTCGATGGCGATGCAAGTATG
ACTGATAGTTGCTGTGGTTACAATCAACTCCTTTATTCTTTTGTTACGAT
TATTGCTATTTTCTTTTACAAGATAGTGGGGCGGGG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9859:1904..3589-

>mRNA_D-dudresnayi_contig9859.28666.1 ID=mRNA_D-dudresnayi_contig9859.28666.1|Name=mRNA_D-dudresnayi_contig9859.28666.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=774bp|location=Sequence derived from alignment at D-dudresnayi_contig9859:1904..3589- (Desmarestia dudresnayi DdudBR16 monoicous)
ACCGTAAGGGCAACCGCGAGGAAGGACGCGAGGATGTGGATGACGCCGAA
GACCGTAAGGGCAACCGCGAGGAAGGACGCGAGGATGTGGATGACGCCGA
AGCTGGCGAGGACCAGGCGGAGGCTAGCGACAGCGACGAGAATGCCGCCA
ATGGCAAGCAACAGCTGGCGAGGACCAGGCGGAGGCTAGCGACAGCGACG
AGAATGCCGCCAATGGCAAGCAACAGAATGGGGCTGCCAATGGCCACCAT
GCTGAGGAGGAGGATTCAGACCATGATCAAGAGGCCGAAGGCGTCAAGAA
CTCTCGGGGCGAGGAATATGATGATGATGGTGGCGATGATAGTGATGATG
AAGATGAAGACTAGCCGCGAGAGGGGATGTGTGCGTGTGGATGAACTCGA
TGGCGATGCAAGTATGACTGATAGTTGCTGTGGTTACAATCAACTCCTTT
ATTCTTTTGTTACGATTATTGCTATTTTCTTTTACAAGATAGTGGGGCGG
AATGGGGCTGCCAATGGCCACCATGCTGAGGAGGAGGATTCAGACCATGA
TCAAGAGGCCGAAGGCGTCAAGAACTCTCGGGGCGAGGAATATGATGATG
ATGGTGGCGATGATAGTGATGATGAAGATGAAGACTAGCCGCGAGAGGGG
ATGTGTGCGTGTGGATGAACTCGATGGCGATGCAAGTATGACTGATAGTT
GCTGTGGTTACAATCAACTCCTTTATTCTTTTGTTACGATTATTGCTATT
TTCTTTTACAAGATAGTGGGGCGG
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