mRNA_D-dudresnayi_contig9844.28658.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9844.28658.1
Unique NamemRNA_D-dudresnayi_contig9844.28658.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig9844.28658.1 vs. uniprot
Match: D8LKX2_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX2_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 3.450e-92
Identity = 139/149 (93.29%), Postives = 144/149 (96.64%), Query Frame = 1 
Query:    1 GMVLTQEEIDGCRDAFLAFDKDRSGSIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFPEFLKVIENQKTRAQNFDDETDMVDAFVACGGKMDKTGHVKREALVKIIKQDFGLTIDIEDLINKIDSDGSGAIEFEEFKRLLS 447
            GMVLTQEEIDGCRDAFLAFDKDRSG+IDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFPEFLKVIENQKTRAQNFDDETDM+DAFVACGG+MDKTGHVKR ALVKIIK DFGLTI+IEDLINKID+DGSG IEF EFK LLS
Sbjct:   28 GMVLTQEEIDGCRDAFLAFDKDRSGNIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFPEFLKVIENQKTRAQNFDDETDMIDAFVACGGRMDKTGHVKRGALVKIIKVDFGLTINIEDLINKIDADGSGEIEFPEFKALLS 176
[Close]
BLAST of mRNA_D-dudresnayi_contig9844.28658.1 vs. uniprot
Match: A0A835Z187_9STRA (EF hand-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z187_9STRA)

HSP 1 Score: 260 bits (664), Expect = 2.880e-87
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 1 
Query:    4 MVLTQEEIDGCRDAFLAFDKDRSGSIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFPEFLKVIENQKTRAQNFDDETDMVDAFVACGGKMDKTGHVKREALVKIIKQDFGLTIDIEDLINKIDSDGSGAIEFEEFKRLLS 447
            MVLTQEEIDGCRDAFLAFDKDRSG+IDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDF EFLKVIENQK RA++FDDETDM+DAFVACGG  +K+GHVKR+ LVKIIKQDFGLTIDIEDLIN+ID DGSG IEFEEFK LLS
Sbjct:    1 MVLTQEEIDGCRDAFLAFDKDRSGNIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFSEFLKVIENQKMRAESFDDETDMIDAFVACGGLANKSGHVKRDTLVKIIKQDFGLTIDIEDLINRIDVDGSGEIEFEEFKTLLS 148
[Close]
BLAST of mRNA_D-dudresnayi_contig9844.28658.1 vs. uniprot
Match: A0A7S1XYK3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYK3_9STRA)

HSP 1 Score: 259 bits (662), Expect = 2.850e-86
Identity = 131/148 (88.51%), Postives = 141/148 (95.27%), Query Frame = 1 
Query:    4 MVLTQEEIDGCRDAFLAFDKDRSGSIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFPEFLKVIENQKTRAQNFDDETDMVDAFVACGGKMDKTGHVKREALVKIIKQDFGLTIDIEDLINKIDSDGSGAIEFEEFKRLLS 447
            MVLTQEEIDGCR+AFLAFDKDRSG+IDVWELRQVLEAMGQKPTEEELFQMISEVD+NMSGSIDF EFLKVIENQK RA+NFDDETDM+DAFVACGG+ DK G+VKRE LVKIIKQDFGLTIDIE+LINKID+DGSG IEFEEF+ LLS
Sbjct:   48 MVLTQEEIDGCREAFLAFDKDRSGTIDVWELRQVLEAMGQKPTEEELFQMISEVDENMSGSIDFAEFLKVIENQKDRAENFDDETDMIDAFVACGGRPDKEGNVKRETLVKIIKQDFGLTIDIEELINKIDTDGSGEIEFEEFRTLLS 195
[Close]
BLAST of mRNA_D-dudresnayi_contig9844.28658.1 vs. uniprot
Match: A0A812KW91_SYMMI (Calmodulin n=6 Tax=cellular organisms TaxID=131567 RepID=A0A812KW91_SYMMI)

HSP 1 Score: 257 bits (656), Expect = 4.770e-86
Identity = 129/148 (87.16%), Postives = 140/148 (94.59%), Query Frame = 1 
Query:    4 MVLTQEEIDGCRDAFLAFDKDRSGSIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFPEFLKVIENQKTRAQNFDDETDMVDAFVACGGKMDKTGHVKREALVKIIKQDFGLTIDIEDLINKIDSDGSGAIEFEEFKRLLS 447
            MVL+QEEIDGCR+AFLAFDKDRSG+IDVWELRQVLEAMGQKPTEEELFQMISEVD+NMSGSIDF EFLKVIENQK RA+NFDDE+DM+DAFVACGG  DK+GHVKRE LV+IIK DFGLTIDIE+LINKID+DGSG IEFEEFK LLS
Sbjct:    1 MVLSQEEIDGCREAFLAFDKDRSGTIDVWELRQVLEAMGQKPTEEELFQMISEVDENMSGSIDFAEFLKVIENQKERAENFDDESDMIDAFVACGGLQDKSGHVKRETLVRIIKHDFGLTIDIEELINKIDTDGSGEIEFEEFKTLLS 148
[Close]
BLAST of mRNA_D-dudresnayi_contig9844.28658.1 vs. uniprot
Match: A0A7S2GY36_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GY36_9STRA)

HSP 1 Score: 253 bits (646), Expect = 1.600e-84
Identity = 127/148 (85.81%), Postives = 139/148 (93.92%), Query Frame = 1 
Query:    4 MVLTQEEIDGCRDAFLAFDKDRSGSIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFPEFLKVIENQKTRAQNFDDETDMVDAFVACGGKMDKTGHVKREALVKIIKQDFGLTIDIEDLINKIDSDGSGAIEFEEFKRLLS 447
            MVL+Q+EIDGCR+AFLAFDKD+SG+IDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDF EFL VIENQK+RA++FDDE DM+DAFVACGGK DKTGHVKR+ LVKIIK DFGLTIDIEDLINKID+DGSG IEF+EF  LLS
Sbjct:    1 MVLSQDEIDGCREAFLAFDKDQSGTIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFAEFLLVIENQKSRAESFDDENDMIDAFVACGGKADKTGHVKRDTLVKIIKTDFGLTIDIEDLINKIDTDGSGKIEFDEFMTLLS 148
[Close]
BLAST of mRNA_D-dudresnayi_contig9844.28658.1 vs. uniprot
Match: A0A7S1CKF1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKF1_9STRA)

HSP 1 Score: 249 bits (635), Expect = 3.340e-82
Identity = 127/148 (85.81%), Postives = 134/148 (90.54%), Query Frame = 1 
Query:    4 MVLTQEEIDGCRDAFLAFDKDRSGSIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFPEFLKVIENQKTRAQNFDDETDMVDAFVACGGKMDKTGHVKREALVKIIKQDFGLTIDIEDLINKIDSDGSGAIEFEEFKRLLS 447
            M LTQEEIDGCRDAFLAFDKDRSG+IDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDF EFLKVIE QK RA  FDDE+DM+DAFVACGGK DK GHV R+ LVKIIK DFGLTIDIE LIN+ID+DGSG IE+EEFK LLS
Sbjct:   45 MPLTQEEIDGCRDAFLAFDKDRSGTIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFGEFLKVIEKQKERAAKFDDESDMIDAFVACGGKADKEGHVHRDTLVKIIKHDFGLTIDIEQLINEIDADGSGEIEYEEFKSLLS 192
[Close]
BLAST of mRNA_D-dudresnayi_contig9844.28658.1 vs. uniprot
Match: A0A6U3V7I8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3V7I8_9STRA)

HSP 1 Score: 244 bits (624), Expect = 3.720e-81
Identity = 123/148 (83.11%), Postives = 135/148 (91.22%), Query Frame = 1 
Query:    4 MVLTQEEIDGCRDAFLAFDKDRSGSIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFPEFLKVIENQKTRAQNFDDETDMVDAFVACGGKMDKTGHVKREALVKIIKQDFGLTIDIEDLINKIDSDGSGAIEFEEFKRLLS 447
            MVL+QEEID CR AFLAFDKDRSG+IDVWELRQVLEAMGQ PTE+ELFQMISEVDDNMSGSIDF EFLKV+E+QK RA+NFDDE DM+DAFVACGG  D++GHVKRE L+KIIK DFGL IDIE+LINKID+DGSG IEFEEFK LLS
Sbjct:    1 MVLSQEEIDSCRGAFLAFDKDRSGTIDVWELRQVLEAMGQAPTEDELFQMISEVDDNMSGSIDFGEFLKVVESQKRRAENFDDENDMIDAFVACGGMPDRSGHVKRETLIKIIKHDFGLMIDIEELINKIDTDGSGEIEFEEFKILLS 148
[Close]
BLAST of mRNA_D-dudresnayi_contig9844.28658.1 vs. uniprot
Match: A0A812ZLM1_SYMMI (Calmodulin n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZLM1_SYMMI)

HSP 1 Score: 242 bits (617), Expect = 4.800e-80
Identity = 117/148 (79.05%), Postives = 139/148 (93.92%), Query Frame = 1 
Query:    4 MVLTQEEIDGCRDAFLAFDKDRSGSIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFPEFLKVIENQKTRAQNFDDETDMVDAFVACGGKMDKTGHVKREALVKIIKQDFGLTIDIEDLINKIDSDGSGAIEFEEFKRLLS 447
            MVL+QEEIDGCR+AFLAFDKDRSG+ID+WELRQVLEAMGQ PTEEELFQMISEVD+NMSG+IDF EFLKVIENQK RA++FDDE+DM+DA+VACGG+ DK+GHV R+ L++IIKQDFGL I+IE+LINK+D+DGSG IEF+EFK LL+
Sbjct:    5 MVLSQEEIDGCREAFLAFDKDRSGTIDIWELRQVLEAMGQSPTEEELFQMISEVDENMSGAIDFSEFLKVIENQKERAESFDDESDMIDAYVACGGQPDKSGHVARDTLIRIIKQDFGLPINIEELINKVDTDGSGEIEFDEFKTLLT 152
[Close]
BLAST of mRNA_D-dudresnayi_contig9844.28658.1 vs. uniprot
Match: B8C0A4_THAPS (EF hand-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0A4_THAPS)

HSP 1 Score: 237 bits (604), Expect = 4.160e-78
Identity = 117/147 (79.59%), Postives = 133/147 (90.48%), Query Frame = 1 
Query:    4 MVLTQEEIDGCRDAFLAFDKDRSGSIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFPEFLKVIENQKTRAQNFDDETDMVDAFVACGGKMDKTGHVKREALVKIIKQDFGLTIDIEDLINKIDSDGSGAIEFEEFKRLL 444
            MVL+QE+IDGCR+AFLAFDKDRSG+IDVWELRQVLEAMGQ PTE+ELFQMISEVD+NMSGSIDF EFLKV+E+ K RA+N DDE D++DAFVACGG+ DK GHVKRE L+ IIK DFGLTIDIEDLINKID+DGSG IEF+EF  +L
Sbjct:    1 MVLSQEDIDGCREAFLAFDKDRSGTIDVWELRQVLEAMGQAPTEDELFQMISEVDENMSGSIDFGEFLKVVESHKKRAENLDDENDLLDAFVACGGQPDKGGHVKRETLISIIKHDFGLTIDIEDLINKIDTDGSGEIEFDEFSLML 147
[Close]
BLAST of mRNA_D-dudresnayi_contig9844.28658.1 vs. uniprot
Match: A0A8J2SH02_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH02_9STRA)

HSP 1 Score: 238 bits (607), Expect = 9.730e-78
Identity = 121/139 (87.05%), Postives = 129/139 (92.81%), Query Frame = 1 
Query:   31 GCRDAFLAFDKDRSGSIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFPEFLKVIENQKTRAQNFDDETDMVDAFVACGGKMDKTGHVKREALVKIIKQDFGLTIDIEDLINKIDSDGSGAIEFEEFKRLLS 447
            GCRDAFLAFDKDRSG+IDVWELRQVLEAMGQKPTEEELFQMISEVD+NMSGSIDF EFLKVIENQK RA+NFDDE DM+DAFVACGG+ DK GHV+RE LVKIIK DFGLTIDIE+LINKID+D SG IEFEEFK LLS
Sbjct:   68 GCRDAFLAFDKDRSGTIDVWELRQVLEAMGQKPTEEELFQMISEVDENMSGSIDFAEFLKVIENQKERAENFDDENDMIDAFVACGGEPDKGGHVRRETLVKIIKHDFGLTIDIEELINKIDTDLSGEIEFEEFKALLS 206
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9844.28658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKX2_ECTSI3.450e-9293.29Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A835Z187_9STRA2.880e-8789.19EF hand-containing protein n=1 Tax=Tribonema minus... [more]
A0A7S1XYK3_9STRA2.850e-8688.51Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A812KW91_SYMMI4.770e-8687.16Calmodulin n=6 Tax=cellular organisms TaxID=131567... [more]
A0A7S2GY36_9STRA1.600e-8485.81Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1CKF1_9STRA3.340e-8285.81Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A6U3V7I8_9STRA3.720e-8183.11Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A812ZLM1_SYMMI4.800e-8079.05Calmodulin n=1 Tax=Symbiodinium microadriaticum Ta... [more]
B8C0A4_THAPS4.160e-7879.59EF hand-containing protein n=1 Tax=Thalassiosira p... [more]
A0A8J2SH02_9STRA9.730e-7887.05Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9844contigD-dudresnayi_contig9844:5082..8444 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score276.2
Seed ortholog evalue9.2e-72
Seed eggNOG ortholog2880.D8LKX2
KEGG koko:K02183
KEGG Pathwayko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04070,ko04114,ko04218,ko04261,ko04270,ko04371,ko04626,ko04713,ko04720,ko04722,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05152,ko05167,ko05200,ko05214,ko05418,map04014,map04015,map04016,map04020,map04022,map04024,map04070,map04114,map04218,map04261,map04270,map04371,map04626,map04713,map04720,map04722,map04728,map04740,map04744,map04745,map04750,map04910,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04970,map04971,map05010,map05031,map05034,map05133,map05152,map05167,map05200,map05214,map05418
GOsGO:0005575,GO:0005623,GO:0005929,GO:0031514,GO:0042995,GO:0043226,GO:0044464,GO:0120025
EggNOG free text desc.Ca2 -binding protein (EF-Hand superfamily
EggNOG OGsCOG5126@1,KOG0027@2759
COG Functional cat.DTZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03036,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptiondynein light chain
Ec32 orthologEc-11_005890.1
Exons4
Model size450
Cds size447
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9844.28658.1prot_D-dudresnayi_contig9844.28658.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9844 5082..8441 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930943.598881-CDS-D-dudresnayi_contig9844:5081..52111622930943.598881-CDS-D-dudresnayi_contig9844:5081..5211Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9844 5082..5211 -
1690557974.6266336-CDS-D-dudresnayi_contig9844:5081..52111690557974.6266336-CDS-D-dudresnayi_contig9844:5081..5211Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9844 5082..5211 -
1622930943.6274405-CDS-D-dudresnayi_contig9844:6845..69551622930943.6274405-CDS-D-dudresnayi_contig9844:6845..6955Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9844 6846..6955 -
1690557974.6382291-CDS-D-dudresnayi_contig9844:6845..69551690557974.6382291-CDS-D-dudresnayi_contig9844:6845..6955Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9844 6846..6955 -
1622930943.6661365-CDS-D-dudresnayi_contig9844:7497..76051622930943.6661365-CDS-D-dudresnayi_contig9844:7497..7605Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9844 7498..7605 -
1690557974.6489959-CDS-D-dudresnayi_contig9844:7497..76051690557974.6489959-CDS-D-dudresnayi_contig9844:7497..7605Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9844 7498..7605 -
1622930943.6878803-CDS-D-dudresnayi_contig9844:8342..84411622930943.6878803-CDS-D-dudresnayi_contig9844:8342..8441Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9844 8343..8441 -
1690557974.6597352-CDS-D-dudresnayi_contig9844:8342..84411690557974.6597352-CDS-D-dudresnayi_contig9844:8342..8441Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9844 8343..8441 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930943.7118905-UTR-D-dudresnayi_contig9844:8441..84441622930943.7118905-UTR-D-dudresnayi_contig9844:8441..8444Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9844 8442..8444 -
1690557974.6699774-UTR-D-dudresnayi_contig9844:8441..84441690557974.6699774-UTR-D-dudresnayi_contig9844:8441..8444Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9844 8442..8444 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9844.28658.1

>prot_D-dudresnayi_contig9844.28658.1 ID=prot_D-dudresnayi_contig9844.28658.1|Name=mRNA_D-dudresnayi_contig9844.28658.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=149bp
MVLTQEEIDGCRDAFLAFDKDRSGSIDVWELRQVLEAMGQKPTEEELFQM
ISEVDDNMSGSIDFPEFLKVIENQKTRAQNFDDETDMVDAFVACGGKMDK
TGHVKREALVKIIKQDFGLTIDIEDLINKIDSDGSGAIEFEEFKRLLS*
back to top

mRNA from alignment at D-dudresnayi_contig9844:5082..8444-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9844.28658.1 ID=mRNA_D-dudresnayi_contig9844.28658.1|Name=mRNA_D-dudresnayi_contig9844.28658.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3363bp|location=Sequence derived from alignment at D-dudresnayi_contig9844:5082..8444- (Desmarestia dudresnayi DdudBR16 monoicous)
GGAATGGTCCTTACACAGGAAGAGATCGATGGATGCAGAGATGCATTTTT
AGCGTTTGATAAGGATCGGAGCGGGAGTATTGATGTTTGGGAATTGCGAC
AGGTACGGCCCAAAAATGAAGCACAAGCGTACGTACTCGTATTTAGTGTT
CCCGTTCGTATTTACAGGTGTCGCTTGCAGGACACTCGGTCGAGTAAATA
CATCCGGATATATGTATCGGGTATTAGTACGACCTGAAGCACCTTCTCTG
AATCACTGTATACTGCTCGCCCAACGATCAGACGCGGAGACCATACACTC
TGTATTCATTCTATACCTTGGTTCTATACGTGCTGTTTGTATTGCTCTTG
GCGACAGTGCGATGTATTTAGAATACTGAGTATATCAATATTGATGAGCA
AAGCCAATAAATGGCTCGAAGAAGAGCTTAACTATTATTACGAGCCCCAG
TTGATTAAGAAGGAGGTTTGCCACACGTGGGCACACATGGACATGATGCT
CAACAAGCACTAATAACATCGGGCGTCGCTGACTCGAAGTAGAAAGGCGT
GACGGAGAACGACATACTCGTAGCTCGAGCTACACGTAGTACATATCAAT
AGTCAATTCCTTCGGCCATTATACGACAACTAAACGAGTACCAGGTAAAT
GCCACCAGGTACGAGTATGTAATAATTGTACCGTGTACCGTGCTGTCAAC
AAAGGCTGGATTTTCCGATAGATAGCTTAGCGTCAACTCATCGCAAGGGT
GACACTGAGCTGTCACTCATGTCTTGGAGGGGCCACCAAAATTGTCTGTT
GAGGATGGTGCCTATCGTGTGCAATATACCGCCCACAAGGTCCTTGAGGC
GATGGGGCAAAAACCTACGGAGGAGGAACTCTTCCAGATGATCAGCGAGG
TCGATGACAACATGTCAGGATCTATTGACTTCCCAGAGTTTCTCAAGGTA
TACCGTTGCCCCCGCTACAGCTGATTAGACTGGTGATTTGTTGGTTTCCT
GCTGTGTGCCGTGCACGCGAGAGAGGTTGTTCAGAATGACGCCGATAATT
CGACGTATCATGTACCACGCGTCACACGGAGATCTCCCGCAGGCAGCATA
TTGGTCGTACAACATCAGTGCGCGATACGAGGGTAGTACCATGCGATGTT
GGTTGGAGAACCTCATTCGTAGTATTAGCAATATTAACGGAATCCATATG
CCCGCCTCTGCAATTCTCGACATTTTCTTGTACTCGTTGTTGGGGGTATT
GCATGTAACACATTCACCGCAAACACGAAACCTTGGGCAAGTCGTGAGAG
GGAACATCCAATAAATGTGCGTACACACGTAGTAGTGGACAGCAGGCTTT
CGAGCATGTGGTGCTGACAATGACGAACTCCAGCTCTGTGCGTAGTCCGT
GTACCAATGTCAAGCACCTTCAAGCTACCCCTCAGCAATCGCACGCGGTG
TGGGGTGGCTCTTACCTGCCAACTTGTCGCCCCGTCAAGGTTATCGAGAA
TCAAAAGACACGGGCACAGAACTTCGACGACGAAACAGATATGGTGGATG
CGTTCGTTGCTTGTGGGGGCAAGATGGACAAAACGGGACATGTCAAGAGG
TGCGAGCACGATCCCTCTACAAAACCTAGCTAGACGCACTACTGTTGCTG
TTTCCATCTAGCTTCATCAATCTCATTCTATGTGCCGAGCGGCGAGCCGA
GCAGAGGGCCCTGACAGACATTGTTAGTTGGATGACATGGCGAACGTGTT
GTCGCCACGATACACGTTATTACTGTGATGGGTCTTACTTTTTCAATAAA
AAAAACTTATCATGTTTCAATACATGCAGCACATTGTACATGACAATTAC
CAGGTAACAAAGACCAAGAGACCTGTTGTTAGTGCGGATATGATACCACG
AACCACGAGTGATTGTTCGATCGTGCTCTACTCGAAGCGCGACGACGTTG
CCGCCGACAGCGCCAATGATGGATTGAACCCCGACAGATTAGAAACTGCT
AACGCTGGATGACGTTGTCGAGCGTAATCCCAGAGAGCCCCGGTCTGCGC
TCGCTTTGTGCTACCGATCTAGAATGTATTATCATCGTTGTGTTCGTCGT
CACGATATCAGCGGAATTCCCAGCCGTACGTATGTATCGTGTTGCCATAT
TTGCGGCAAGAAGCTTAACACAATACCGGAAGGCACGATCAGTGATATCT
TCCTAATAGACCGTGAAACGAAGAAGCTCGACAATAGACGCGGGGGGGGC
GGGCTGGGGGGGCTGGGGATACTCATTTCATGCATGGCCATAGTCGTATG
ACCATAGACCCTGGGGGCGGGGGGGAGGGGTTACGTTGTTTTGGGAAGGA
TTGAACGACCGGTTCAAGAGGCTACCAAAAAGCTGGGCCGTCCTCCTGGT
TTCATGGACGGTGTCGGCGATAACAAGCAGCAGTAGCATAACGATCTTTC
ATCCGTGAGAACATCACCCCGGGGGGAAGTGGGGGAGATATCTAGACTTA
GCGTCCCTCGCCAATATATCTGGTGTTGCGCCAACCGATCGTCCAGGGGC
AAACCCAGGACACTTTTGGCGACAGGCTACAGATTGCACATTGTCACACC
TGTCGAAAGGAGAGACGCATTATTGTTATGTGCCCAAGGTATCATACCTG
TTTGGGTGTTTTTTCTATCGTGCGGCGGGCGCGGGCACCACGAAAAATAA
ATTACACGACGTTTCAGTGTCCCATGAAGTATTTGTGGGGCAGGACTGCA
CATTCGGCGGCTGCTGTGTTCGTACAAATATAATGTTTTATACCCCGAAG
TAGGCCATGCAATACCGAATGTTGATACGTCGTGGGGCTTAACGATGACA
GGCGGGCATGCCGACACTGGCTCCAATAGAAACAGCAGAAAAAAAGTCTC
CTATTACGAGTAATATTCTGACGACGAGGGTCTCACTTCGCATCCTACAA
CGGCCCTGATCCCGCCGGTAGGAGGTGGGGGCACGTCACAATTTTTGTGA
GGGACGCTAGTTTCACCGGCTCTTTACTCTTAGCCAAAAAGTTTAAGCGC
ATCCCGCCTGGAACGAAGTCCCACAGTTTTAACGTGACGATTCCATTGTC
CGTTATTTCCTACCCTACAGCTGTCTCGTCCTGGAGTCACTCCCTTGGGC
ATTGCAACTCATAAACATGATACGAAGTATAATAGTGCATGACGATTTGA
GGCATTTTCGTTCTTACTCGTGCTTGTTTCCAGGGAAGCCCTGGTGAAAA
TAATCAAGCAGGACTTCGGATTGACGATCGACATTGAAGACCTCATCAAC
AAGATAGATTCCGATGGATCGGGCGCGATAGAATTTGAGGAGTTTAAGAG
ACTCCTATCATAG
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig9844:5082..8444-

>mRNA_D-dudresnayi_contig9844.28658.1 ID=mRNA_D-dudresnayi_contig9844.28658.1|Name=mRNA_D-dudresnayi_contig9844.28658.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=894bp|location=Sequence derived from alignment at D-dudresnayi_contig9844:5082..8444- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGTCCTTACACAGGAAGAGATCGATGGATGCAGAGATGCATTTTTAGC
GTTTGATAAGGATCGGAGCGGGAGTATTGATGTTTGGGAATTGCGACAGA
TGGTCCTTACACAGGAAGAGATCGATGGATGCAGAGATGCATTTTTAGCG
TTTGATAAGGATCGGAGCGGGAGTATTGATGTTTGGGAATTGCGACAGGT
CCTTGAGGCGATGGGGCAAAAACCTACGGAGGAGGAACTCTTCCAGATGA
TCAGCGAGGTCGATGACAACATGTCAGGATCTATTGACTTCCCAGAGTTT
CTCAAGGTCCTTGAGGCGATGGGGCAAAAACCTACGGAGGAGGAACTCTT
CCAGATGATCAGCGAGGTCGATGACAACATGTCAGGATCTATTGACTTCC
CAGAGTTTCTCAAGGTTATCGAGAATCAAAAGACACGGGCACAGAACTTC
GACGACGAAACAGATATGGTGGATGCGTTCGTTGCTTGTGGGGGCAAGAT
GGACAAAACGGGACATGTCAAGAGGTTATCGAGAATCAAAAGACACGGGC
ACAGAACTTCGACGACGAAACAGATATGGTGGATGCGTTCGTTGCTTGTG
GGGGCAAGATGGACAAAACGGGACATGTCAAGAGGGAAGCCCTGGTGAAA
ATAATCAAGCAGGACTTCGGATTGACGATCGACATTGAAGACCTCATCAA
CAAGATAGATTCCGATGGATCGGGCGCGATAGAATTTGAGGAGTTTAAGA
GACTCCTATCATAGGGAAGCCCTGGTGAAAATAATCAAGCAGGACTTCGG
ATTGACGATCGACATTGAAGACCTCATCAACAAGATAGATTCCGATGGAT
CGGGCGCGATAGAATTTGAGGAGTTTAAGAGACTCCTATCATAG
back to top