mRNA_D-dudresnayi_contig9835.28644.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9835.28644.1 vs. uniprot
Match: A0A6H5JL08_9PHAE (Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL08_9PHAE) HSP 1 Score: 146 bits (369), Expect = 1.290e-38 Identity = 67/105 (63.81%), Postives = 83/105 (79.05%), Query Frame = 2 Query: 2 GTRDSNLMDLTGAPGVEFLSPAERLLCSQLHLLPGYYLVIKDAMIQECARAGCLKRKNISSLALLDAARLDKMYDFFTTCGWVSEQPQDFQYSNNNNNGLSA*NP 316 G +NL+D+ GAPGVE+LSPAER LCSQLHLLPGYYLVIK+AMIQEC ++GCLK+ N++ LA LD RLDKMYDFF+TCGWV+E+ +DF+ S N + P Sbjct: 525 GRNGNNLLDVEGAPGVEYLSPAERALCSQLHLLPGYYLVIKNAMIQECVKSGCLKKSNLAGLATLDKPRLDKMYDFFSTCGWVTEKHRDFEVSGAAANAIPGSPP 629
BLAST of mRNA_D-dudresnayi_contig9835.28644.1 vs. uniprot
Match: D7FRV7_ECTSI (Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRV7_ECTSI) HSP 1 Score: 142 bits (359), Expect = 3.050e-37 Identity = 67/99 (67.68%), Postives = 84/99 (84.85%), Query Frame = 2 Query: 11 DSNLMDLTGAPGVEFLSPAERLLCSQLHLLPGYYLVIKDAMIQECARAGCLKRKNISSLALLDAARLDKMYDFFTTCGWVSEQPQDF--QYSNNNNNGL 301 + NL+D++GAPGVE+LSPAER+LCSQLHLLPGYYLVIK+AMIQECARAGCLK+K + LA+LD RL+KMYDFF+T GWV+++ DF S++ N GL Sbjct: 521 NDNLLDISGAPGVEYLSPAERVLCSQLHLLPGYYLVIKNAMIQECARAGCLKKKRLPDLAVLDTPRLNKMYDFFSTLGWVTDKATDFTPNGSSSTNGGL 619
BLAST of mRNA_D-dudresnayi_contig9835.28644.1 vs. uniprot
Match: A0A2V3IYH8_9FLOR (Transcriptional adapter 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYH8_9FLOR) HSP 1 Score: 78.2 bits (191), Expect = 2.090e-14 Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 2 Query: 23 MDLTGAPGVEFLSPAERLLCSQLHLLPGYYLVIKDAMIQECARAGCLKRKNISSLALLDAARLDKMYDFFTTCGWV 250 MDL G E LS E LC L + P YL+IKD MI+E ARAG L++K+ ++ LDA ++ K+YD+F CGW+ Sbjct: 282 MDLEKMAGAELLSRTELSLCGALKITPHQYLIIKDIMIRENARAGSLRKKDAKAIVKLDATKVYKIYDYFVACGWI 357
BLAST of mRNA_D-dudresnayi_contig9835.28644.1 vs. uniprot
Match: A0A7R9V4L8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V4L8_9CHLO) HSP 1 Score: 70.5 bits (171), Expect = 4.300e-13 Identity = 33/77 (42.86%), Postives = 48/77 (62.34%), Query Frame = 2 Query: 23 MDLTGAPGVEFLSPAERLLCSQLHLLPGYYLVIKDAMIQECARAGCLKRKNISSLALLDAARLDKMYDFFTTCGWVS 253 +D+T PGVE L ER LC+ LLP +YL +KD M+++C R G + R+ + LD R KMY+ +T+ GWV+ Sbjct: 30 LDITCLPGVELLGRRERELCASSRLLPLHYLALKDMMMRDCERHGVVTRQEARTFFRLDPQRCVKMYELWTSLGWVT 106
BLAST of mRNA_D-dudresnayi_contig9835.28644.1 vs. uniprot
Match: A0A250XHS1_9CHLO (Uncharacterized protein n=2 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XHS1_9CHLO) HSP 1 Score: 73.9 bits (180), Expect = 8.910e-13 Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = 2 Query: 23 MDLTGAPGVEFLSPAERLLCSQLHLLPGYYLVIKDAMIQECARAGCLKRKNISSLALLDAARLDKMYDFFTTCGWVS 253 +D+T PGVE LS ER LC+ LLP +YL +KD M+++C + G + ++ + LDA R K+Y+ +TT GWVS Sbjct: 563 LDITCLPGVELLSRRERELCALSRLLPVHYLALKDLMLRDCQKHGAVSKQEARTFFRLDATRCLKLYELWTTLGWVS 639
BLAST of mRNA_D-dudresnayi_contig9835.28644.1 vs. uniprot
Match: A0A642VDM8_9ASCO (Transcriptional adapter 2 n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642VDM8_9ASCO) HSP 1 Score: 68.2 bits (165), Expect = 8.410e-11 Identity = 31/80 (38.75%), Postives = 51/80 (63.75%), Query Frame = 2 Query: 14 SNLMDLTGAPGVEFLSPAERLLCSQLHLLPGYYLVIKDAMIQECARAG-CLKRKNISSLALLDAARLDKMYDFFTTCGWV 250 SN +D++ AP V+ L+P ER+LCSQL ++P YL IK+ + +E + G LK+K L +D+ + ++Y+FF W+ Sbjct: 359 SNPLDISSAPDVDLLTPDERVLCSQLRIMPKPYLAIKETLFKELLKTGGVLKKKTAKELLKVDSNKTSRIYEFFQAQKWI 438
BLAST of mRNA_D-dudresnayi_contig9835.28644.1 vs. uniprot
Match: A0A1E4TJV2_9ASCO (Transcriptional adapter 2 n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4TJV2_9ASCO) HSP 1 Score: 67.0 bits (162), Expect = 2.160e-10 Identity = 31/78 (39.74%), Postives = 50/78 (64.10%), Query Frame = 2 Query: 23 MDLTGAPGVEFLSPAERLLCSQLHLLPGYYLVIKDAMIQECARAG-CLKRKNISSLALLDAARLDKMYDFFTTCGWVS 253 +D++ AP VEFLSP E++LCS+L +LP Y+ IK+ + +E R G LK++ L +D + ++Y+FF W+S Sbjct: 381 LDISNAPDVEFLSPEEQVLCSELRILPKPYIAIKETLFRELLRTGGILKKRTARELIKIDVNKTARIYEFFLEQKWLS 458
BLAST of mRNA_D-dudresnayi_contig9835.28644.1 vs. uniprot
Match: A0A388KT59_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KT59_CHABU) HSP 1 Score: 64.3 bits (155), Expect = 2.190e-9 Identity = 29/81 (35.80%), Postives = 50/81 (61.73%), Query Frame = 2 Query: 20 LMDLTGAPGVEFLSPAERLLCSQLHLLPGYYLVIKDAMIQECARAGCLKRKNISSLALLDAARLDKMYDFFTTCGWVSEQP 262 ++D+ G + LS E+ LCSQ LLP +YL +K+A+I++ +G + R ++ +D +LD++YDFF + GW+ P Sbjct: 2100 ILDVNAHLGADLLSEKEKELCSQCRLLPVHYLKMKEALIKKSVISGYVVRSEAYTMFKVDPLKLDRIYDFFLSKGWIPGDP 2180
BLAST of mRNA_D-dudresnayi_contig9835.28644.1 vs. uniprot
Match: A0A6A5CAG7_NAEFO (Transcriptional adapter n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5CAG7_NAEFO) HSP 1 Score: 62.4 bits (150), Expect = 9.310e-9 Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 2 Query: 32 TGAPGVEFLSPAERLLCSQLHLLPGYYLVIKDAMIQECARAGCLKRKNISSLAL-LDAARLDKMYDFFTTCGWVSEQPQ 265 T + G+E LS ER LCS+LH+LP Y++IKD + +E +G + + L +D ++ K++DFF W++ PQ Sbjct: 495 TNSVGIELLSKRERTLCSELHILPRQYMLIKDTLTRESLLSGFVSKSAACKLLSDMDKDQVKKIHDFFVVNAWINSAPQ 573
BLAST of mRNA_D-dudresnayi_contig9835.28644.1 vs. uniprot
Match: UPI001CFD951F (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD951F) HSP 1 Score: 60.8 bits (146), Expect = 3.480e-8 Identity = 33/94 (35.11%), Postives = 50/94 (53.19%), Query Frame = 2 Query: 5 TRDSNLMDLTGAP------GVEFLSPAERLLCSQLHLLPGYYLVIKDAMIQECARAGCLKRKNISSLAL-LDAARLDKMYDFFTTCGWVSEQPQ 265 T N L G P G+E LS ER+LCS+LH+LP Y++IKD + +E G + + L +D ++ K++DFF W++ PQ Sbjct: 503 TSRRNFDHLMGTPKDTNTLGMELLSKRERILCSELHILPRQYMLIKDTLTRESLLTGFVSKSAACKLLSDMDKDQVKKIHDFFVANSWINGAPQ 596 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9835.28644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9835.28644.1 >prot_D-dudresnayi_contig9835.28644.1 ID=prot_D-dudresnayi_contig9835.28644.1|Name=mRNA_D-dudresnayi_contig9835.28644.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=96bp MDLTGAPGVEFLSPAERLLCSQLHLLPGYYLVIKDAMIQECARAGCLKRKback to top mRNA from alignment at D-dudresnayi_contig9835:243..2348+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9835.28644.1 ID=mRNA_D-dudresnayi_contig9835.28644.1|Name=mRNA_D-dudresnayi_contig9835.28644.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2106bp|location=Sequence derived from alignment at D-dudresnayi_contig9835:243..2348+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9835:243..2348+ >mRNA_D-dudresnayi_contig9835.28644.1 ID=mRNA_D-dudresnayi_contig9835.28644.1|Name=mRNA_D-dudresnayi_contig9835.28644.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=576bp|location=Sequence derived from alignment at D-dudresnayi_contig9835:243..2348+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |