mRNA_D-dudresnayi_contig9796.28600.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9796.28600.1
Unique NamemRNA_D-dudresnayi_contig9796.28600.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9796.28600.1 vs. uniprot
Match: A0A7S3GN76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GN76_9STRA)

HSP 1 Score: 651 bits (1679), Expect = 6.150e-232
Identity = 323/352 (91.76%), Postives = 339/352 (96.31%), Query Frame = 1
Query:   40 MGYKTPTPIQRRALPLAMAGIDLVCMARTGSGKTCAFLLPIVQKLQKHSTSNGVRGLVLSPTRELAMQTYRFAKDFAKFTDLNIINILGGDPIEAQFEALSSRPDIIVATPGRLMHHLREINTFKLNNVQLLVFDEADRLFEMGFAEQLNEIVRECPVERQTLLFSATMPKALVQFSRAGLRDPQLIRLDTDSQLSEELRLAFFTVRSNEKMAAFLYLVRKIIPANQMTIVFAATRHHSELIHAMLERIRVSSTIVYGTMDQDARSQHLKDFRNGSIRYLIVTDLAARGIDVPLLNNVVNFHFPPSPKLFVHRCGRAARNGRIGYAFSLVEPEEMAFMVDIHTYLGKQLDNC 1095
            M YKTPTPIQR+ALPLA+AGIDLVCMARTGSGKTCAFLLP +QKL KHS S GVR +VLSPTRELA+QT+RFAKD AKFTDLNIINILGGDPIEAQFEAL+SRPD+IVATPGRLMHHLREI TFKLN+VQ+LVFDEADRLFEMGFAEQLNEIVRECPVERQTLLFSATMPKALVQFSRAGLRDPQLIRLDTDSQLSEELRLAFFTVRSNEKMAAFLYLVRKIIP NQ+TIVF+ATRHHSEL+HAMLERI VSSTIVYGTMDQDARSQHLK FRNGSIRYLIVTDLAARGIDVPLLNNV+NFHFPPSPKLF+HRCGRAAR GRIGYAFSLVEPEE+AFMVDIHTYLGK LDNC
Sbjct:    1 MNYKTPTPIQRKALPLALAGIDLVCMARTGSGKTCAFLLPTIQKLNKHSNSLGVRAIVLSPTRELAVQTFRFAKDIAKFTDLNIINILGGDPIEAQFEALASRPDLIVATPGRLMHHLREITTFKLNHVQMLVFDEADRLFEMGFAEQLNEIVRECPVERQTLLFSATMPKALVQFSRAGLRDPQLIRLDTDSQLSEELRLAFFTVRSNEKMAAFLYLVRKIIPENQITIVFSATRHHSELLHAMLERINVSSTIVYGTMDQDARSQHLKAFRNGSIRYLIVTDLAARGIDVPLLNNVINFHFPPSPKLFIHRCGRAARQGRIGYAFSLVEPEELAFMVDIHTYLGKNLDNC 352          
BLAST of mRNA_D-dudresnayi_contig9796.28600.1 vs. uniprot
Match: W7TM98_9STRA (RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM98_9STRA)

HSP 1 Score: 558 bits (1438), Expect = 3.190e-186
Identity = 295/559 (52.77%), Postives = 398/559 (71.20%), Query Frame = 1
Query:    1 LRLEREILNAINRMGYKTPTPIQRRALPLAMAGIDLVCMARTGSGKTCAFLLPIVQKLQKHSTSNGVRGLVLSPTRELAMQTYRFAKDFAKFTDLNIINILGGDPIEAQFEALSSRPDIIVATPGRLMHHLREINTFKLNNVQLLVFDEADRLFEMGFAEQLNEIVRECPVERQTLLFSATMPKALVQFSRAGLRDPQLIRLDTDSQLSEELRLAFFTVRSNEKMAAFLYLVRKIIPANQMTIVFAATRHHSELIHAMLERIRVSSTIVYGTMDQDARSQHLKDFRNGSIRYLIVTDLAARGIDVPLLNNVVNFHFPPSPKLFVHRCGRAARNGRIGYAFSLVEPEEMAFMVDIHTYLGKQLDNCDEEGNNSNAYTLDTMTPDMVHAGVLPQDVLDNENDFVKRCYA-DDDMLATMFRISENGMQQYRRTRTEASRGGVKTAKAII-KNSLIRAIHPLIAGCDPRNCSS-----DIVEKNKFVRMLQTFRPAQTVFETG-IGTGSLGTNKVNGG---ALPQQMSLKNKLIKGTEMMKALRDANFSSLERNRVVVAAQQA 1644
            L L +++   INRMGYK PTP+QR++LP A+AG D+VCMARTGSGKT AFL+P+++KLQ HS   G R L+LSPTRELAMQT +FAK  + FTDL +  ++GGD ++ QFEALS  PDII+ TPGR+MHHL+E+  F L  VQ+ VFDEADRLFEMGFAEQ+ EI+R  P ERQTLL+SAT+PK L QF+RAGL+DPQLIRLDT+S++SE+L L+FFTVRS  K AA L+LVR+I+P +++TI+FAAT+HH E +  +   I +  + ++G MD +AR  +L+ FR+G +RYLIVTD+AARGIDVPLL+ V+N+ FPP PKLFVHR GRAAR GR G AFSLVEPEEMA+MVD+H +LG+   N  + G     YTL  M PDMVH G LPQ +LD EN+ ++     +  +L +++R+ EN M+QYRRTR + S+  ++ AKA++        +HPL+ G DP+  ++      +  K + V+MLQ FRP QTV E   I  GSL      G    A+      K+ +  G ++M+A+R  + S+++R R  +A +Q+
Sbjct:  114 LGLSKDVFAGINRMGYKLPTPVQRKSLPEALAGKDVVCMARTGSGKTAAFLIPVLEKLQSHSPRVGARALILSPTRELAMQTIKFAKGLSHFTDLRVALLVGGDSMDDQFEALSRNPDIIIGTPGRVMHHLQEVPDFSLAAVQMAVFDEADRLFEMGFAEQIKEILRTMPEERQTLLYSATLPKMLAQFARAGLQDPQLIRLDTESKVSEQLCLSFFTVRSGNKTAALLFLVREILPRDKLTIIFAATKHHVEYLQEVFSEIGLPCSAIFGAMDFEARKLNLERFRHGRVRYLIVTDVAARGIDVPLLDYVINYSFPPLPKLFVHRVGRAARQGRSGAAFSLVEPEEMAYMVDLHLFLGRSPQNVFKAGGYQ-GYTLTEMKPDMVHFGGLPQHLLDEENESLRLLTERNGGVLTSLWRVCENAMKQYRRTRPDPSKAAIRRAKALVGAEEGDMHVHPLLLGSDPKRMTAGGGLESLRAKEEMVKMLQGFRPQQTVLEVQRIDAGSLYKGLPVGERNRAVAGMGGAKSDVEAGIKVMRAIRKEHGSAIKRKREKMANKQS 671          
BLAST of mRNA_D-dudresnayi_contig9796.28600.1 vs. uniprot
Match: A0A835Z3G9_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3G9_9STRA)

HSP 1 Score: 527 bits (1357), Expect = 6.690e-175
Identity = 264/506 (52.17%), Postives = 359/506 (70.95%), Query Frame = 1
Query:    1 LRLEREILNAINRMGYKTPTPIQRRALPLAMAGIDLVCMARTGSGKTCAFLLPIVQKLQKHSTSNGVRGLVLSPTRELAMQTYRFAKDFAKFTDLNIINILGGDPIEAQFEALSSRPDIIVATPGRLMHHLREINTFKLNNVQLLVFDEADRLFEMGFAEQLNEIVRECPVERQTLLFSATMPKALVQFSRAGLRDPQLIRLDTDSQLSEELRLAFFTVRSNEKMAAFLYLVRKIIPANQMTIVFAATRHHSELIHAMLERIRVSSTIVYGTMDQDARSQHLKDFRNGSIRYLIVTDLAARGIDVPLLNNVVNFHFPPSPKLFVHRCGRAARNGRIGYAFSLVEPEEMAFMVDIHTYLGKQLDNCDEEGNNSNA----YTLDTMTPDMVHAGVLPQDVLDNENDFVKRCYADDDM---LATMFRISENGMQQYRRTRTEASRGGVKTAKAIIKNSLIRAIHPLIAGCDPRNCSS--DIVEKNKFVRMLQTFRPAQTVFETGIGTGS 1491
            L L  E++  +  MGY+ PTP+QR++LP+ +  +D V MARTGSGKT AFL+P+++KL++HST  GVR ++LSP+RELA+QT  F K   +FT L    ++GGD ++ QFEAL++ PD+I+ATPGRLMHHL+E+  F L  V+++VFDEADRLFEMGFAEQL E++R  P  RQTLLFSATMPK LVQF+RAGL+DP LIRLD + ++SE LR+AF   RS +K A  L+L+R++IP +QMT++F ATRHH+E +HA++    V S+I+YGTMDQ+AR  +L+ FR G ++ L+VTD+AARGIDVPLLNNVVN+ FPP PKLFVHR GRAAR GR G AFSLVEPEE+ +M+D+H +LG+ + N   EG  +      Y+L  MTPDMVH G  PQ +LD E + ++   +       LA + R+SEN M+QYRRTR +AS+   + AK +     +  IHPL+     R   S      +  +++ +  FRP +T+FE   G G+
Sbjct:   17 LALSPEVMRGVMLMGYRVPTPVQRKSLPVTLTNVDTVVMARTGSGKTAAFLIPVLEKLKEHSTKMGVRSVILSPSRELALQTLTFVKKMGRFTSLRFALLVGGDSMDKQFEALANNPDVIIATPGRLMHHLQEVPDFTLKAVEIVVFDEADRLFEMGFAEQLREVMRTVPERRQTLLFSATMPKQLVQFARAGLQDPVLIRLDAEQRVSESLRMAFLACRSADKAACLLFLLREVIPRDQMTVIFTATRHHAEYLHALIGATGVESSIIYGTMDQEARKTNLEKFRRGKVKLLLVTDVAARGIDVPLLNNVVNYSFPPLPKLFVHRVGRAARQGRTGTAFSLVEPEELPYMMDLHLFLGRPVTNSWGEGGAAAGVGVGYSLGEMTPDMVHYGAFPQQILDEETESLRELMSRGGASTGLAMLLRVSENAMKQYRRTRPDASKRACERAKELD----LSGIHPLMQRFATRGMVSAEGAASRAAYLKAMTAFRPKETIFEVLGGGGT 518          
BLAST of mRNA_D-dudresnayi_contig9796.28600.1 vs. uniprot
Match: A0A484EF93_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EF93_BRELC)

HSP 1 Score: 508 bits (1309), Expect = 2.190e-172
Identity = 260/517 (50.29%), Postives = 355/517 (68.67%), Query Frame = 1
Query:   19 ILNAINRMGYKTPTPIQRRALPLAMAGIDLVCMARTGSGKTCAFLLPIVQKLQKHSTSNGVRGLVLSPTRELAMQTYRFAKDFAKFTDLNIINILGGDPIEAQFEALSSRPDIIVATPGRLMHHLREINTFKLNNVQLLVFDEADRLFEMGFAEQLNEIVRECPVERQTLLFSATMPKALVQFSRAGLRDPQLIRLDTDSQLSEELRLAFFTVRSNEKMAAFLYLVRKIIPANQMTIVFAATRHHSELIHAMLERIRVSSTIVYGTMDQDARSQHLKDFRNGSIRYLIVTDLAARGIDVPLLNNVVNFHFPPSPKLFVHRCGRAARNGRIGYAFSLVEPEEMAFMVDIHTYLGKQL-DNC-DEEGNNSNAYTLDTMTPDMVHAGVLPQDVLDNENDFVKRCYADDDMLATMFRISENGMQQYRRTRTEASRGGVKTAKAIIKNSLIRAIHPLIAGCDPRNCSSDIVEKNKFVRMLQTFRPAQTVFETGIGTGSLGTNKVNGGALPQQMSLKNKLIKG 1563
            +   +  MGYK PTPIQR++LP+ ++G D V MARTGSGKT AFL+P+V+KL++H+   GVR +VLSPTRELA+QT RF K  +KFT L +  I+GG+ ++ QFEA+++ PDI++ATPGRLMHHL EI  F L  V+ +VFDEADR+FEMGFAEQL EI++  PV RQTLLFSAT+PK LVQF+RAGL DP+L+RLD ++Q+SE+L++AFFTVRS +K A FLYLVR+ +P +  TIVFAATRHH E +HA+L    + ++  YG MDQ +R   L  FR    + LIVTD+AARGID+PLLNNV+N+ FPP+ KLFVHR GRAAR GR G A S V+P+E  FMVD+H Y+G++L D+C D        YTL TMT   VH G  P +++D EN+ ++   A+   ++ + ++ +N  + Y RTR + S+  +   K ++    ++ +HPL          ++  EK  ++  LQTFRP QT+FE  +G  S       G     QM +K + + G
Sbjct:   47 VFRGVMAMGYKVPTPIQRKSLPIVLSGKDCVAMARTGSGKTAAFLIPMVEKLKEHTNKIGVRAVVLSPTRELAVQTLRFTKLVSKFTTLKMALIVGGEGMDQQFEAIAANPDILIATPGRLMHHLHEIPDFHLQAVEYVVFDEADRMFEMGFAEQLQEILKTMPVHRQTLLFSATLPKGLVQFARAGLNDPELLRLDVENQISEQLKMAFFTVRSGDKPALFLYLVREFLPQDDQTIVFAATRHHVEFLHALLAACHIDASYAYGDMDQASRKIQLGKFRAKKTKLLIVTDVAARGIDIPLLNNVLNYSFPPTAKLFVHRVGRAARAGRTGTALSFVDPDETPFMVDLHLYIGRRLEDSCPDLIRTGKKLYTLRTMTVADVHYGAFPNELIDQENEAIQEIVANHPHVSPLIKVCDNAYKAYARTRADPSKHSIHRGKELV----VKKVHPLFQ--QEYVLETNKAEKAAYIDSLQTFRPPQTIFEIAVGAHSSAKRSSPG----VQMMVKKRQVHG 553          
BLAST of mRNA_D-dudresnayi_contig9796.28600.1 vs. uniprot
Match: A0A6G0XKG6_9STRA (RNA helicase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKG6_9STRA)

HSP 1 Score: 510 bits (1314), Expect = 1.210e-169
Identity = 260/498 (52.21%), Postives = 352/498 (70.68%), Query Frame = 1
Query:    1 LRLEREILNAINRMGYKTPTPIQRRALPLAMAGIDLVCMARTGSGKTCAFLLPIVQKLQKHSTSNGVRGLVLSPTRELAMQTYRFAKDFAKFTDLNIINILGGDPIEAQFEALSSRPDIIVATPGRLMHHLREINTFKLNNVQLLVFDEADRLFEMGFAEQLNEIVRECPVERQTLLFSATMPKALVQFSRAGLRDPQLIRLDTDSQLSEELRLAFFTVRSNEKMAAFLYLVRKIIPANQMTIVFAATRHHSELIHAMLERIRVSSTIVYGTMDQDARSQHLKDFRNGSIRYLIVTDLAARGIDVPLLNNVVNFHFPPSPKLFVHRCGRAARNGRIGYAFSLVEPEEMAFMVDIHTYLGKQLDNCDEEGNNSNAYTLDTMTPDMVHAGVLPQDVLDNENDFVKRCYADDDMLATMFRISENGMQQYRRTRTEASRGGVKTAKAIIKNSLIRAIHPLIAGCDPRNCSSDIVEKNKFVRMLQTFRPAQTVFETGIGTGSL 1494
            L L   I  A+  MGYK PTPIQR++LP  ++G D+V MARTGSGKT AFL+P+++KL++HS   GVR LVLSPTRELA+QT +FAK  AK+TD+    I+GGD +E QFE ++S PD++VATPGRLMH L+EI  F L  ++ + FDEADR+FEMGFAEQL+EI+   P  RQTLLFSAT+PKALVQF+RAGL +P+LIRLD +SQ+S++L+++FFT+R+ +K AA +YL+R IIP+   TIVFAATRHH E +  +L+ + + S+ VYG MDQ +R  ++  FR      LIVTD+AARGID+PLLNNV+N+ FP +PKLFVHR GRAAR GR G AF+ V+P+EM FMVD+H YLG++L+  D    +   YTL+TMT D VH G LPQ +LD EN+ ++       ++A + ++  N  + Y R+R E S+  +K AK I     ++ +HPL       +     + K  ++  L+ FRP  T+FE  +GT SL
Sbjct:   16 LGLSPPIFKAVMAMGYKVPTPIQRKSLPHVLSGKDVVAMARTGSGKTAAFLIPMLEKLKEHSKKVGVRALVLSPTRELAVQTIKFAKSLAKYTDIKCGLIVGGDSMEQQFELIASNPDVLVATPGRLMHLLQEIPEFNLQAIEYVCFDEADRIFEMGFAEQLHEILSSMPASRQTLLFSATLPKALVQFARAGLNEPELIRLDVESQISDQLKVSFFTMRTEDKNAALIYLLRDIIPSTDQTIVFAATRHHVEFLSELLKSVHLESSCVYGDMDQTSRKINIGKFRAKKTPILIVTDVAARGIDIPLLNNVINYSFPATPKLFVHRVGRAARAGRSGMAFNFVDPDEMPFMVDLHLYLGRRLE--DSSPVDVPGYTLETMTVDQVHYGSLPQSILDTENECLRETLTRHSVIAPLVQVCANAYKMYCRSRAEPSKQSIKRAKEIP----MKKVHPLFVD----SLDESQMGKEAYLDQLKEFRPQATIFEVAVGTHSL 503          
BLAST of mRNA_D-dudresnayi_contig9796.28600.1 vs. uniprot
Match: A0A2D4CBC0_PYTIN (RNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBC0_PYTIN)

HSP 1 Score: 510 bits (1314), Expect = 1.710e-169
Identity = 267/539 (49.54%), Postives = 361/539 (66.98%), Query Frame = 1
Query:    1 LRLEREILNAINRMGYKTPTPIQRRALPLAMAGIDLVCMARTGSGKTCAFLLPIVQKLQKHSTSNGVRGLVLSPTRELAMQTYRFAKDFAKFTDLNIINILGGDPIEAQFEALSSRPDIIVATPGRLMHHLREINTFKLNNVQLLVFDEADRLFEMGFAEQLNEIVRECPVERQTLLFSATMPKALVQFSRAGLRDPQLIRLDTDSQLSEELRLAFFTVRSNEKMAAFLYLVRKIIPANQMTIVFAATRHHSELIHAMLERIRVSSTIVYGTMDQDARSQHLKDFRNGSIRYLIVTDLAARGIDVPLLNNVVNFHFPPSPKLFVHRCGRAARNGRIGYAFSLVEPEEMAFMVDIHTYLGKQLDNCDEEGNNSNAYTLDTMTPDMVHAGVLPQDVLDNENDFVKRCYADDDMLATMFRISENGMQQYRRTRTEASRGGVKTAKAIIKNSLIRAIHPLIAGCDPRNCSSDIVEKNKFVRMLQTFRPAQTVFETGIGTGSLGTNKVNGGALPQQMSLKNKLIKGTEMMKALRDANFSSLERN 1617
            L L   I   +  MGYK PTPIQR+ LP+ ++G D+V MARTGSGKT AFL+P+++KL++HS   GVR +VLSPTRELA+QT RFAK  AKFT L I  I+GG+ +EAQFE +++ PD++VATPGRLMHHL+EI  F L  V+ +VFDEADR+FEMGFAEQL EI++  P  RQTLLFSAT+PKALVQF+RAGL +P+LIRLD ++++SE L++ FFTVRS +K A FLY+VR++IPA+  TIVFAATRHH E +H +L    + S++VYG MDQ +R  ++  FR      LIVTD+AARGID+PLLNNV+N+ FPP+ KLFVHR GRAAR GR G AF+ V+P+E  FMVD+H Y+G++++  D     + AYTL TM    VH G  P +++D E + V         +A + ++  N  + Y RTR + S+  ++ AK +     +  IHP       +  S    E+ +++  LQ FRPAQT+FE   G  S+  +     A P+           T M++   D N +S E +
Sbjct:   38 LGLSPPIFRGVMAMGYKVPTPIQRKTLPIVLSGKDVVAMARTGSGKTAAFLIPMLEKLKEHSKKIGVRAVVLSPTRELAVQTLRFAKSLAKFTSLKISLIVGGEGMEAQFEMIAANPDVLVATPGRLMHHLQEIPDFNLQAVEYVVFDEADRIFEMGFAEQLQEILKNMPASRQTLLFSATLPKALVQFARAGLNEPELIRLDVENKISENLKMTFFTVRSGDKPALFLYMVRELIPADDQTIVFAATRHHVEFLHELLAANHIDSSLVYGDMDQASRKINIGKFRAKKTNLLIVTDVAARGIDIPLLNNVLNYSFPPTAKLFVHRVGRAARAGRSGTAFNFVDPDETPFMVDLHLYIGRRIE--DSSPLQAKAYTLSTMQVSDVHYGAFPNELIDQETEHVHDLLTTHPQIAPLVKVCANAYKMYTRTRADPSKLSIRRAKELH----VTKIHPFFLAEYVQEESK--AERVQYIESLQNFRPAQTIFEVSTGAHSIKKSAPRELAKPKD---------DTSMVRPTEDDNAASNEED 559          
BLAST of mRNA_D-dudresnayi_contig9796.28600.1 vs. uniprot
Match: A0A3L6VN77_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VN77_9STRA)

HSP 1 Score: 503 bits (1294), Expect = 4.630e-169
Identity = 260/527 (49.34%), Postives = 359/527 (68.12%), Query Frame = 1
Query:    1 LRLEREILNAINRMGYKTPTPIQRRALPLAMAGIDLVCMARTGSGKTCAFLLPIVQKLQKHSTSNGVRGLVLSPTRELAMQTYRFAKDFAKFTDLNIINILGGDPIEAQFEALSSRPDIIVATPGRLMHHLREINTFKLNNVQLLVFDEADRLFEMGFAEQLNEIVRECPVERQTLLFSATMPKALVQFSRAGLRDPQLIRLDTDSQLSEELRLAFFTVRSNEKMAAFLYLVRKIIPANQMTIVFAATRHHSELIHAMLERIRVSSTIVYGTMDQDARSQHLKDFRNGSIRYLIVTDLAARGIDVPLLNNVVNFHFPPSPKLFVHRCGRAARNGRIGYAFSLVEPEEMAFMVDIHTYLGKQLDNCDEEGNNSNAYTLDTMTPDMVHAGVLPQDVLDNENDFVKRCYADDDMLATMFRISENGMQQYRRTRTEASRGGVKTAKAIIKNSLIRAIHPLIAGCDPRNCSSDIVEKNKFVRMLQTFRPAQTVFETGIGTGSLGTNKVNGGALPQQMSLKNKLIKGTEMMKA 1581
            L L   I  A+  MGYK PTPIQR++LP  ++G D+V MARTGSGKT AFL+P+++KL++HS   GVR LVLSPTRELA+QT +FAK  AK+TD+    I+GGD +E QFE ++S PD+IVATPGRLMH L+EI  F L  ++ + FDEADR+FEMGFAEQL+EI+   P  RQTLLFSAT+P+ALVQF+RAGL +P+LIRLD ++Q+S++L+++FFT+R+ +K AA +YL+R +IP+   TIVFAATRHH E +H +L+ + + S+ VYG MDQ +R  ++  FR      LIVTD+AARGID+PLLNNV+N+ FP +PKLFVHR GRAAR GR G AF+ V+P+EM FMVD+H YLG++L+  D    +   Y+L +MT D VH G LPQ++LD EN+ ++   +    ++ +  +  N  + Y R+R E S+  +K +K +    +   +HPL             V K  ++  L+ FRP  T+FE  +GT SL         +  +  L N +I   +  KA
Sbjct:   41 LGLSPPIFKAVMAMGYKVPTPIQRKSLPHVLSGKDVVAMARTGSGKTAAFLIPMLEKLKEHSKKVGVRALVLSPTRELAVQTIKFAKSLAKYTDIKCGLIVGGDSMEQQFELIASNPDVIVATPGRLMHLLQEIPEFNLQAIEYVCFDEADRIFEMGFAEQLHEILTNMPASRQTLLFSATLPRALVQFARAGLTEPELIRLDVENQISDQLKVSFFTMRTEDKNAALVYLLRDMIPSTDQTIVFAATRHHVEFLHELLKTVHLDSSCVYGDMDQTSRKINIGMFRAKKTPILIVTDVAARGIDIPLLNNVINYAFPATPKLFVHRVGRAARAGRSGVAFNFVDPDEMPFMVDLHLYLGRRLE--DSTPTDVPGYSLTSMTVDQVHYGTLPQNILDTENEGLRETLSRHSTISPLVHVCANAYKMYCRSRAEPSKQSIKRSKELPMKKV--CVHPLFLDA----MDDTQVNKEAYLDKLKGFRPPATIFEIAVGTHSLKKTSPGVIMMKTKRRLHNLIIDKNQKTKA 559          
BLAST of mRNA_D-dudresnayi_contig9796.28600.1 vs. uniprot
Match: A0A6H5KZB1_9PHAE (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZB1_9PHAE)

HSP 1 Score: 514 bits (1323), Expect = 1.030e-168
Identity = 266/514 (51.75%), Postives = 355/514 (69.07%), Query Frame = 1
Query:   40 MGYKTPTPIQRRALPLAMAGIDLVCMARTGSGKTCAFLLPIVQKLQKHSTSNGVRGLVLSPTRELAMQTYRFAKDFAKFTDLNIINILGGDPIEAQFEALSSRPDIIVATPGRLMHHLREINTFKLNNVQLLVFDEADRLFEMGFAEQLNEIVRECPVERQTLLFSATMPKALVQFSRAGLRDPQLIRLDTDSQLSEELRLAFFTVRSNEKMAAFLYLVRKIIPANQMTIVFAATRHHSELIHAMLERIRVSSTIVYGTMDQDARSQHLKDFRNGSIRYLIVTDLAARGIDVPLLNNVVNFHFPPSPKLFVHRCGRAARNGRIGYAFSLVEPEEMAFMVDIHTYLGKQLDN------------------------CDEEGNNSNA---YTLDTMTPDMVHAGVLPQDVLDNENDFVKRCYADDDM-LATMFRISENGMQQYRRTRTEASRGGVKTAKAIIKNSLIRAIHPLIAGCDPRNCSSDIVE--KNKFVRMLQTFRPAQTVFETGIGTGS 1491
            MGYK PTP+QR++LP+ +AG D+V MARTGSGKT AFL+P+++KL  HS   G R ++LSPTRELA+QT  FA+  +K  DL +  ++GGD ++ QF ALS  PDII+ATPGRLMHHL+E+  F L +V++LVFDEADRLFEMGFAEQL EI+R  P ERQ+LLFSATMPK LVQF+RAGL+DP LIRLDT+S++S EL LAF T RS +K AA L+L+R++IP + MTIVF ATRHH+E +H +L+    +S++VYG MDQ+ARS HL  FR G  + L+VTD+AARGIDVPLLNNVVN+ FPP+PKLFVHR GRAAR GR G A+S+V+PEE+  M+D+H +LG++  N                         +E+     A   Y +  + PD+VH G  PQ V+D+EN+ +K    +    L+ + R+ +N M+QYRRTR + S   +  AK + +       HPL+ G + R   S      +NKF+R + +FRP +T+FE   G G+
Sbjct:    3 MGYKVPTPVQRKSLPVTLAGADVVVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFARKMSKLKDLRMALLVGGDSMDKQFTALSDNPDIIIATPGRLMHHLQEVPEFTLRSVEVLVFDEADRLFEMGFAEQLREIMRGVPEERQSLLFSATMPKQLVQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAALLFLLREVIPEDDMTIVFVATRHHAEFLHELLKEAGTASSVVYGAMDQEARSIHLDKFRKGKTKLLVVTDVAARGIDVPLLNNVVNYAFPPAPKLFVHRVGRAARQGRTGTAYSIVDPEEIPHMLDLHLFLGRKPTNVYVAPKGPGPDGATVDGVGAGGGDAEEKEREKGAIVGYDVSELNPDLVHYGNFPQQVMDDENESLKEMIGNSGSNLSGLQRVCQNAMKQYRRTRPDPSGRAIARAKLLDRGET----HPLLVGFEARGMHSAAAHAGRNKFMRAMSSFRPKETIFELLGGGGT 512          
BLAST of mRNA_D-dudresnayi_contig9796.28600.1 vs. uniprot
Match: A0A8K1CNV6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNV6_PYTOL)

HSP 1 Score: 509 bits (1311), Expect = 1.050e-168
Identity = 261/515 (50.68%), Postives = 356/515 (69.13%), Query Frame = 1
Query:    1 LRLEREILNAINRMGYKTPTPIQRRALPLAMAGIDLVCMARTGSGKTCAFLLPIVQKLQKHSTSNGVRGLVLSPTRELAMQTYRFAKDFAKFTDLNIINILGGDPIEAQFEALSSRPDIIVATPGRLMHHLREINTFKLNNVQLLVFDEADRLFEMGFAEQLNEIVRECPVERQTLLFSATMPKALVQFSRAGLRDPQLIRLDTDSQLSEELRLAFFTVRSNEKMAAFLYLVRKIIPANQMTIVFAATRHHSELIHAMLERIRVSSTIVYGTMDQDARSQHLKDFRNGSIRYLIVTDLAARGIDVPLLNNVVNFHFPPSPKLFVHRCGRAARNGRIGYAFSLVEPEEMAFMVDIHTYLGKQLDNCDEEGNNSNAYTLDTMTPDMVHAGVLPQDVLDNENDFVKRCYADDDMLATMFRISENGMQQYRRTRTEASRGGVKTAKAIIKNSLIRAIHPLIAGCDPRNCSSDIVEKNKFVRMLQTFRPAQTVFETGIGTGSLGTNKVNGGALPQQMSLK 1545
            L L  +I   +  MGYK PTPIQR+ LP+ ++G D+V MARTGSGKT AFL+P+++KL++HS   GVR +VLSPTRELA+QT RFAK  AKFT + I  I+GG+ +EAQFEA+++ PD+IVATPGRLMHHL+EI  F L  V+ +VFDEADR+FEMGFAEQL EI++  P  RQTLLFSAT+PKALVQF+RAGL DP+LIRLD ++++SE L++ F TVR+ +K A FLY+VR+ IP +  TIVFAATRHH E +H  L+   + S++VYG MDQ +R  ++  FR      LIVTD+AARGID+PLLNNV N+ FPP+ KLFVHR GRAAR GR G AF+ V+P+E  +MVD+H Y+G++L+  D    N+ AY+L TM    +H G  P +++D E +      A +  +A + ++  N  + Y RTR + S+  ++ AK +     +  +HP       ++ S   +EK +++  LQ FRP QT+FE   GT S+   K + G +  Q+  K
Sbjct:   39 LGLSPQIFRGVMAMGYKVPTPIQRKTLPIVLSGKDVVAMARTGSGKTAAFLIPMLEKLKEHSKKIGVRAVVLSPTRELAVQTLRFAKSLAKFTSIKISLIVGGEGMEAQFEAIAANPDVIVATPGRLMHHLQEIPDFNLKVVEYVVFDEADRIFEMGFAEQLQEILKNMPASRQTLLFSATLPKALVQFARAGLNDPELIRLDVENKISENLKMTFLTVRTADKPALFLYMVREFIPKDDQTIVFAATRHHVEFLHEFLKAHHIDSSLVYGEMDQASRKINIGKFRAKKTNLLIVTDVAARGIDIPLLNNVFNYSFPPTAKLFVHRVGRAARAGRSGTAFNFVDPDETPYMVDLHLYIGRRLE--DSSPVNAKAYSLSTMQVSDIHYGSFPNELIDQETEHTHDILAHNPQIAPLVKVCANAYKMYTRTRADPSKLSIRRAKELH----VTKVHPFFLAEYVQDESK--IEKVQYIESLQNFRPQQTIFEVATGTHSV--KKTSPGVVMMQVKRK 543          
BLAST of mRNA_D-dudresnayi_contig9796.28600.1 vs. uniprot
Match: A0A485LKP5_9STRA (RNA helicase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKP5_9STRA)

HSP 1 Score: 508 bits (1307), Expect = 1.810e-168
Identity = 270/539 (50.09%), Postives = 361/539 (66.98%), Query Frame = 1
Query:    1 LRLEREILNAINRMGYKTPTPIQRRALPLAMAGIDLVCMARTGSGKTCAFLLPIVQKLQKHSTSNGVRGLVLSPTRELAMQTYRFAKDFAKFTDLNIINILGGDPIEAQFEALSSRPDIIVATPGRLMHHLREINTFKLNNVQLLVFDEADRLFEMGFAEQLNEIVRECPVERQTLLFSATMPKALVQFSRAGLRDPQLIRLDTDSQLSEELRLAFFTVRSNEKMAAFLYLVRKIIPANQMTIVFAATRHHSELIHAMLERIRVSSTIVYGTMDQDARSQHLKDFRNGSIRYLIVTDLAARGIDVPLLNNVVNFHFPPSPKLFVHRCGRAARNGRIGYAFSLVEPEEMAFMVDIHTYLGKQLDNCDEEGNNSNAYTLDTMTPDMVHAGVLPQDVLDNENDFVKRCYADDDMLATMFRISENGMQQYRRTRTEASRGGVKTAKAIIKNSLIRAIHPLIAGCDPRNCSSDIVEKNKFVRMLQTFRPAQTVFETGIGTGSLGTNKVNGGALPQQMSLKNKLIKGTEMMKALRDANFSSLERN 1617
            L L   I  A+  MGYK PTPIQR++LP  ++G D+V MARTGSGKT AFL+P+++KL++HS   GVR LVLSPTRELA+QT +FAK  AK+T L    I+GGD +E QFE ++S PDIIVATPGRLMH L+EI  F L  ++ + FDEADR+FEMGFAEQL+EI+   P  RQTLLFSAT+PKALVQF+RAGL +P+LIRLD +SQ+S++L+++FFT+R+ +K AA +YL+R +IP+   TIVFAATRHH E +  +L  + + S+ VYG MDQ +R  ++  FR      LIVTD+AARGID+PLLNNVVN+ FP +PKLFVHR GRAAR GR G AF+ V+P+EM FMVD+H YLG++L+  D    +  AYTL TM  D VH G LPQ++LD EN+ ++       ++A +  +  N  + Y R+R E S+  +K AK I      + +HPL  G    +     + K  ++  L+ FRP  T+FE  +GT SL                  K   G  MMK  R+ +   +++N
Sbjct:   16 LGLSPPIFKAVMAMGYKVPTPIQRKSLPHVLSGKDVVAMARTGSGKTAAFLIPMLEKLKEHSKKIGVRALVLSPTRELAVQTIKFAKSLAKYTSLKACLIVGGDSMEQQFEMIASNPDIIVATPGRLMHLLQEIPEFNLQAIEYVCFDEADRIFEMGFAEQLHEILSNMPASRQTLLFSATLPKALVQFARAGLTEPELIRLDVESQISDQLKVSFFTMRTEDKHAALVYLLRDVIPSTDQTIVFAATRHHVEFLSELLASVHLESSCVYGDMDQTSRKINIGKFRAKKTPILIVTDVAARGIDIPLLNNVVNYSFPATPKLFVHRVGRAARAGRSGVAFNFVDPDEMPFMVDLHLYLGRRLE--DSAPVDVPAYTLATMAVDNVHYGSLPQNILDTENECLRETLTRHSVIAPLVSVCNNAYKMYCRSRAEPSKQSIKRAKEIPT----KKVHPLFLG----SLDESQMGKEAYLDKLKGFRPQATIFEVAVGTHSL-----------------KKTSPGVVMMKTKRNLHNGIIDKN 527          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9796.28600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3GN76_9STRA6.150e-23291.76Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
W7TM98_9STRA3.190e-18652.77RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A835Z3G9_9STRA6.690e-17552.17RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A484EF93_BRELC2.190e-17250.29Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A6G0XKG6_9STRA1.210e-16952.21RNA helicase n=1 Tax=Aphanomyces euteiches TaxID=1... [more]
A0A2D4CBC0_PYTIN1.710e-16949.54RNA helicase n=1 Tax=Pythium insidiosum TaxID=1147... [more]
A0A3L6VN77_9STRA4.630e-16949.34Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A6H5KZB1_9PHAE1.030e-16851.75RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A8K1CNV6_PYTOL1.050e-16850.68Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485LKP5_9STRA1.810e-16850.09RNA helicase n=1 Tax=Aphanomyces stellatus TaxID=1... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9796contigD-dudresnayi_contig9796:1..2052 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score515.8
Seed ortholog evalue2.5e-143
Seed eggNOG ortholog4792.ETI36938
KEGG koko:K14808
EggNOG free text desc.DEAD-like helicases superfamily
EggNOG OGs3Q95I@4776,COG0513@1,KOG0337@2759
EC3.6.4.13
COG Functional cat.A
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Exons4
Model size1644
Cds size1644
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9796.28600.1prot_D-dudresnayi_contig9796.28600.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9796 1..2052 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930936.4681504-CDS-D-dudresnayi_contig9796:0..11211622930936.4681504-CDS-D-dudresnayi_contig9796:0..1121Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9796 1..1121 +
1690557971.8783002-CDS-D-dudresnayi_contig9796:0..11211690557971.8783002-CDS-D-dudresnayi_contig9796:0..1121Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9796 1..1121 +
1622930936.4871967-CDS-D-dudresnayi_contig9796:1235..12661622930936.4871967-CDS-D-dudresnayi_contig9796:1235..1266Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9796 1236..1266 +
1690557971.890968-CDS-D-dudresnayi_contig9796:1235..12661690557971.890968-CDS-D-dudresnayi_contig9796:1235..1266Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9796 1236..1266 +
1622930936.5140162-CDS-D-dudresnayi_contig9796:1412..16351622930936.5140162-CDS-D-dudresnayi_contig9796:1412..1635Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9796 1413..1635 +
1690557971.9015493-CDS-D-dudresnayi_contig9796:1412..16351690557971.9015493-CDS-D-dudresnayi_contig9796:1412..1635Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9796 1413..1635 +
1622930936.5331721-CDS-D-dudresnayi_contig9796:1783..20521622930936.5331721-CDS-D-dudresnayi_contig9796:1783..2052Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9796 1784..2052 +
1690557971.9116435-CDS-D-dudresnayi_contig9796:1783..20521690557971.9116435-CDS-D-dudresnayi_contig9796:1783..2052Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9796 1784..2052 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9796.28600.1

>prot_D-dudresnayi_contig9796.28600.1 ID=prot_D-dudresnayi_contig9796.28600.1|Name=mRNA_D-dudresnayi_contig9796.28600.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=548bp
LRLEREILNAINRMGYKTPTPIQRRALPLAMAGIDLVCMARTGSGKTCAF
LLPIVQKLQKHSTSNGVRGLVLSPTRELAMQTYRFAKDFAKFTDLNIINI
LGGDPIEAQFEALSSRPDIIVATPGRLMHHLREINTFKLNNVQLLVFDEA
DRLFEMGFAEQLNEIVRECPVERQTLLFSATMPKALVQFSRAGLRDPQLI
RLDTDSQLSEELRLAFFTVRSNEKMAAFLYLVRKIIPANQMTIVFAATRH
HSELIHAMLERIRVSSTIVYGTMDQDARSQHLKDFRNGSIRYLIVTDLAA
RGIDVPLLNNVVNFHFPPSPKLFVHRCGRAARNGRIGYAFSLVEPEEMAF
MVDIHTYLGKQLDNCDEEGNNSNAYTLDTMTPDMVHAGVLPQDVLDNEND
FVKRCYADDDMLATMFRISENGMQQYRRTRTEASRGGVKTAKAIIKNSLI
RAIHPLIAGCDPRNCSSDIVEKNKFVRMLQTFRPAQTVFETGIGTGSLGT
NKVNGGALPQQMSLKNKLIKGTEMMKALRDANFSSLERNRVVVAAQQA
back to top

mRNA from alignment at D-dudresnayi_contig9796:1..2052+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9796.28600.1 ID=mRNA_D-dudresnayi_contig9796.28600.1|Name=mRNA_D-dudresnayi_contig9796.28600.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2052bp|location=Sequence derived from alignment at D-dudresnayi_contig9796:1..2052+ (Desmarestia dudresnayi DdudBR16 monoicous)
CTTAGATTGGAGAGGGAAATATTGAATGCAATCAATAGGATGGGCTACAA AACCCCCACACCTATTCAGCGAAGGGCACTTCCTTTGGCAATGGCGGGAA TTGATCTAGTTTGTATGGCACGTACAGGTTCCGGAAAGACGTGTGCATTT CTTCTTCCCATTGTACAGAAGCTTCAAAAACATTCAACATCGAACGGTGT GCGAGGTCTTGTTCTGTCACCTACCAGAGAATTGGCCATGCAAACATACA GATTTGCCAAAGATTTTGCAAAATTTACTGACCTTAATATTATTAATATT CTTGGTGGAGATCCTATTGAAGCACAGTTTGAGGCATTATCATCTCGTCC TGATATTATTGTTGCAACACCTGGTCGTCTTATGCATCACCTTCGAGAAA TCAACACATTTAAACTAAACAATGTACAACTTTTGGTTTTTGATGAAGCT GATAGACTTTTTGAAATGGGTTTTGCTGAACAACTTAATGAGATTGTGCG AGAATGTCCTGTTGAGCGCCAAACTCTCCTATTTTCTGCAACTATGCCTA AAGCACTTGTTCAATTTTCCAGAGCTGGTCTGCGCGATCCTCAATTAATC CGTCTCGATACTGATTCTCAGCTCTCTGAGGAACTACGATTAGCATTTTT TACTGTACGTTCGAATGAAAAAATGGCAGCATTTTTATATTTAGTACGTA AAATAATCCCAGCGAATCAGATGACTATTGTATTCGCTGCTACTCGCCAT CATTCTGAACTTATTCATGCTATGTTAGAACGTATTCGTGTAAGTTCAAC TATTGTATATGGTACTATGGATCAAGATGCACGTTCACAACATTTAAAAG ATTTCCGAAATGGTTCTATCCGGTATCTAATCGTCACTGATCTCGCAGCT CGTGGTATCGATGTACCTCTGCTTAATAATGTCGTGAACTTTCATTTCCC ACCTAGTCCTAAACTTTTCGTACATCGTTGTGGTCGTGCTGCACGTAATG GACGTATTGGTTATGCTTTTTCACTGGTAGAACCGGAAGAAATGGCTTTT ATGGTGGATATTCATACTTACTTAGGCAAACAATTAGACAACTGCGATGA AGAGGGGAACAACAGCAATGCGTTAGATTCATCAGAACTGTTTGAAACTG CAGGGAAAGGTGATAAAAAGCAGAAAGATGTTGTTGATAAGGTGAATACC ACCTCGTTTAACACTGCCACTGAGGGTGCCATCAGCTACACACTGGATAC GATGACTCCGGATATGGTAAGCCGGTTACTGTTTGCATATAATATAGAAT AGTGTTATGAATCATTGCTTTGATGATGTAGTTTATAGTTCTATTTCTGT TATTATTTATATATTTATGACATATTTTAATCACTGCCTACTATGAATAT GTCAATTATTAGGTACACGCTGGAGTGCTGCCACAGGATGTGCTGGACAA CGAGAATGATTTCGTGAAGCGCTGCTATGCGGATGACGACATGCTCGCCA CGATGTTCCGCATCTCAGAGAATGGTATGCAGCAGTACCGCCGTACTCGT ACGGAAGCATCGCGTGGTGGAGTGAAGACTGCCAAGGCTATCATTAAGAA TAGTCTAATCCGCGCTATTCATCCCTTAATTGCAGGTGAGGATGAGTGTT ATTTCCCTTCTAGTATTATCTCGGTTTTAATACTATAGTTTATACTTTTA TTATTGTATACTTCATGATGATCATGGTGTGTCTGAACACTACAATGTTA ACCTAATTATTTAATTTTTGTTTCATTTTCTAGGTTGTGATCCTCGCAAC TGCTCCTCCGACATCGTCGAAAAGAATAAATTTGTCCGTATGCTGCAGAC TTTCCGCCCAGCGCAGACAGTCTTCGAGACTGGAATCGGTACTGGATCGC TGGGTACGAATAAAGTGAATGGTGGCGCGTTGCCTCAGCAGATGAGCCTG AAGAACAAGCTCATCAAGGGCACGGAGATGATGAAAGCTCTGCGCGATGC CAACTTTTCTTCGTTAGAGCGCAACCGCGTGGTTGTGGCGGCGCAACAAG CT
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig9796:1..2052+

>mRNA_D-dudresnayi_contig9796.28600.1 ID=mRNA_D-dudresnayi_contig9796.28600.1|Name=mRNA_D-dudresnayi_contig9796.28600.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3288bp|location=Sequence derived from alignment at D-dudresnayi_contig9796:1..2052+ (Desmarestia dudresnayi DdudBR16 monoicous)
CTTAGATTGGAGAGGGAAATATTGAATGCAATCAATAGGATGGGCTACAA
AACCCCCACACCTATTCAGCGAAGGGCACTTCCTTTGGCAATGGCGGGAA
TTGATCTAGTTTGTATGGCACGTACAGGTTCCGGAAAGACGTGTGCATTT
CTTCTTCCCATTGTACAGAAGCTTCAAAAACATTCAACATCGAACGGTGT
GCGAGGTCTTGTTCTGTCACCTACCAGAGAATTGGCCATGCAAACATACA
GATTTGCCAAAGATTTTGCAAAATTTACTGACCTTAATATTATTAATATT
CTTGGTGGAGATCCTATTGAAGCACAGTTTGAGGCATTATCATCTCGTCC
TGATATTATTGTTGCAACACCTGGTCGTCTTATGCATCACCTTCGAGAAA
TCAACACATTTAAACTAAACAATGTACAACTTTTGGTTTTTGATGAAGCT
GATAGACTTTTTGAAATGGGTTTTGCTGAACAACTTAATGAGATTGTGCG
AGAATGTCCTGTTGAGCGCCAAACTCTCCTATTTTCTGCAACTATGCCTA
AAGCACTTGTTCAATTTTCCAGAGCTGGTCTGCGCGATCCTCAATTAATC
CGTCTCGATACTGATTCTCAGCTCTCTGAGGAACTACGATTAGCATTTTT
TACTGTACGTTCGAATGAAAAAATGGCAGCATTTTTATATTTAGTACGTA
AAATAATCCCAGCGAATCAGATGACTATTGTATTCGCTGCTACTCGCCAT
CATTCTGAACTTATTCATGCTATGTTAGAACGTATTCGTGTAAGTTCAAC
TATTGTATATGGTACTATGGATCAAGATGCACGTTCACAACATTTAAAAG
ATTTCCGAAATGGTTCTATCCGGTATCTAATCGTCACTGATCTCGCAGCT
CGTGGTATCGATGTACCTCTGCTTAATAATGTCGTGAACTTTCATTTCCC
ACCTAGTCCTAAACTTTTCGTACATCGTTGTGGTCGTGCTGCACGTAATG
GACGTATTGGTTATGCTTTTTCACTGGTAGAACCGGAAGAAATGGCTTTT
ATGGTGGATATTCATACTTACTTAGGCAAACAATTAGACAACTGCGATGA
AGAGGGGAACAACAGCAATGCCTTAGATTGGAGAGGGAAATATTGAATGC
AATCAATAGGATGGGCTACAAAACCCCCACACCTATTCAGCGAAGGGCAC
TTCCTTTGGCAATGGCGGGAATTGATCTAGTTTGTATGGCACGTACAGGT
TCCGGAAAGACGTGTGCATTTCTTCTTCCCATTGTACAGAAGCTTCAAAA
ACATTCAACATCGAACGGTGTGCGAGGTCTTGTTCTGTCACCTACCAGAG
AATTGGCCATGCAAACATACAGATTTGCCAAAGATTTTGCAAAATTTACT
GACCTTAATATTATTAATATTCTTGGTGGAGATCCTATTGAAGCACAGTT
TGAGGCATTATCATCTCGTCCTGATATTATTGTTGCAACACCTGGTCGTC
TTATGCATCACCTTCGAGAAATCAACACATTTAAACTAAACAATGTACAA
CTTTTGGTTTTTGATGAAGCTGATAGACTTTTTGAAATGGGTTTTGCTGA
ACAACTTAATGAGATTGTGCGAGAATGTCCTGTTGAGCGCCAAACTCTCC
TATTTTCTGCAACTATGCCTAAAGCACTTGTTCAATTTTCCAGAGCTGGT
CTGCGCGATCCTCAATTAATCCGTCTCGATACTGATTCTCAGCTCTCTGA
GGAACTACGATTAGCATTTTTTACTGTACGTTCGAATGAAAAAATGGCAG
CATTTTTATATTTAGTACGTAAAATAATCCCAGCGAATCAGATGACTATT
GTATTCGCTGCTACTCGCCATCATTCTGAACTTATTCATGCTATGTTAGA
ACGTATTCGTGTAAGTTCAACTATTGTATATGGTACTATGGATCAAGATG
CACGTTCACAACATTTAAAAGATTTCCGAAATGGTTCTATCCGGTATCTA
ATCGTCACTGATCTCGCAGCTCGTGGTATCGATGTACCTCTGCTTAATAA
TGTCGTGAACTTTCATTTCCCACCTAGTCCTAAACTTTTCGTACATCGTT
GTGGTCGTGCTGCACGTAATGGACGTATTGGTTATGCTTTTTCACTGGTA
GAACCGGAAGAAATGGCTTTTATGGTGGATATTCATACTTACTTAGGCAA
ACAATTAGACAACTGCGATGAAGAGGGGAACAACAGCAATGCCTACACAC
TGGATACGATGACTCCGGATATGCTACACACTGGATACGATGACTCCGGA
TATGGTACACGCTGGAGTGCTGCCACAGGATGTGCTGGACAACGAGAATG
ATTTCGTGAAGCGCTGCTATGCGGATGACGACATGCTCGCCACGATGTTC
CGCATCTCAGAGAATGGTATGCAGCAGTACCGCCGTACTCGTACGGAAGC
ATCGCGTGGTGGAGTGAAGACTGCCAAGGCTATCATTAAGAATAGTCTAA
TCCGCGCTATTCATCCCTTAATTGCAGGTACACGCTGGAGTGCTGCCACA
GGATGTGCTGGACAACGAGAATGATTTCGTGAAGCGCTGCTATGCGGATG
ACGACATGCTCGCCACGATGTTCCGCATCTCAGAGAATGGTATGCAGCAG
TACCGCCGTACTCGTACGGAAGCATCGCGTGGTGGAGTGAAGACTGCCAA
GGCTATCATTAAGAATAGTCTAATCCGCGCTATTCATCCCTTAATTGCAG
GTTGTGATCCTCGCAACTGCTCCTCCGACATCGTCGAAAAGAATAAATTT
GTCCGTATGCTGCAGACTTTCCGCCCAGCGCAGACAGTCTTCGAGACTGG
AATCGGTACTGGATCGCTGGGTACGAATAAAGTGAATGGTGGCGCGTTGC
CTCAGCAGATGAGCCTGAAGAACAAGCTCATCAAGGGCACGGAGATGATG
AAAGCTCTGCGCGATGCCAACTTTTCTTCGTTAGAGCGCAACCGCGTGGT
TGTGGCGGCGCAACAAGCTGTTGTGATCCTCGCAACTGCTCCTCCGACAT
CGTCGAAAAGAATAAATTTGTCCGTATGCTGCAGACTTTCCGCCCAGCGC
AGACAGTCTTCGAGACTGGAATCGGTACTGGATCGCTGGGTACGAATAAA
GTGAATGGTGGCGCGTTGCCTCAGCAGATGAGCCTGAAGAACAAGCTCAT
CAAGGGCACGGAGATGATGAAAGCTCTGCGCGATGCCAACTTTTCTTCGT
TAGAGCGCAACCGCGTGGTTGTGGCGGCGCAACAAGCT
back to top