mRNA_D-dudresnayi_contig9782.28590.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9782.28590.1
Unique NamemRNA_D-dudresnayi_contig9782.28590.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9782.28590.1 vs. uniprot
Match: A0A6V1N7Z0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N7Z0_HETAK)

HSP 1 Score: 243 bits (620), Expect = 9.470e-77
Identity = 127/248 (51.21%), Postives = 158/248 (63.71%), Query Frame = 1
Query:   28 TSGDSEEVKLAKVTTVYESARDVVPKSYAGDAFATVEIDTSHDRDARAISERS---------------------------KDTNQIASSKAAGTFGPMRAPSFLRATSRFDYQPDICKDYKETGFCGYGDQCKFLHDRGDYKSGWQMEREWEDKQAAKKALE--------------EENYEIQEEAEFPFACHICREGFKDPVVTLCGHYFCQQCAIDSSKKNTKCVVCDKQTFGIFNKARKLIKYME 648
            TSG  E ++ A V   YES R+VVP  YAGDA  T EIDT+ DRDARAI+ER+                           K  +QI  +K  GT GP+RAPS +RA  RFDYQPDICKDYKETGFCGYGD CKF+HDRGDYKSGWQ+E+EWE++Q   K  E              +  Y I  + E PFACHICRE F+ PV TLCGHYFC++CA++  K + +C +C KQT GIFN+A+K+++ M+
Sbjct:   35 TSGSKEGMQQAGV---YESTREVVPTKYAGDATYTTEIDTATDRDARAIAERNLKLNAEGATNDETKIYRGQAGYKNYIEKKESQIGGNKYTGTQGPIRAPSNIRAICRFDYQPDICKDYKETGFCGYGDSCKFIHDRGDYKSGWQLEQEWEEQQKXXKEKEMLGEWASDAEEGDGDNPYLIDSDDELPFACHICREDFEQPVATLCGHYFCEECALEHYKTDKRCAICGKQTSGIFNQAKKIVERMK 279          
BLAST of mRNA_D-dudresnayi_contig9782.28590.1 vs. uniprot
Match: D7G1F0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F0_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 1.400e-66
Identity = 114/225 (50.67%), Postives = 141/225 (62.67%), Query Frame = 1
Query:   70 TVYESARDVVPKSYAGDAFATVEIDTSHDRDARAISERS---------------------------KDTNQIASSKAAGTFGPMRAPSFLRATSRFDYQPDICKDYKETGFCGYGDQCKFLHDRGDYKSGWQMEREWEDKQAAKKALE----------EENYEIQEEAEFPFACHICREGFKDPVVTLCGHYFCQQCAIDSSKKNTKCVVCDKQTFGIFNKARKL 633
            ++++S+R  VP S AG A    EIDT  DRD RAI E++                           KD  QI  +K  GT GP+RAP+FLRAT RFDYQPDICKDYKETGFCG+GD CKFLHDR DYKSGW ME+E+E K+  +K  E          EE Y ++ + + PFAC ICR+GF DP+VT CGHYFC++CA +  K N +C  C KQT G+FN A+KL
Sbjct:  121 SLFDSSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRLNEEGATTDKDGLYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKEREALGEWAEEENEEEYLVESDDDLPFACLICRQGFVDPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKL 345          
BLAST of mRNA_D-dudresnayi_contig9782.28590.1 vs. uniprot
Match: A0A6S8G1U0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8G1U0_9STRA)

HSP 1 Score: 212 bits (539), Expect = 3.490e-65
Identity = 110/223 (49.33%), Postives = 136/223 (60.99%), Query Frame = 1
Query:   76 YESARDVVPKSYAGDAFATVEIDTSHDRDARAISERS------------------------------KDTNQIASSKAAGTFGPMRAPSFLRATSRFDYQPDICKDYKETGFCGYGDQCKFLHDRGDYKSGWQMEREWEDKQAAKKAL----------EEENYEIQEEAEFPFACHICREGFKDPVVTLCGHYFCQQCAIDSSKKNTKCVVCDKQTFGIFNKA 624
            + S+++  P +Y G A +T++I T  DRDARAI ER+                              K   Q+A SK  GT GP+RAPS LRATSRFDYQPDICKDYKETGFCGYGD CKF+HDR +YK+GWQ+E+EWE++Q  KKA             ++Y  Q E++ PFAC ICR  F  PVVT C HYFCQ+CA++    + KC  C K T GIFNKA
Sbjct:   55 FGSSKNSAPATYTGGATSTLDIHTDTDRDARAIHERNLKLKEQRAKSRNENGTKLYQGQGAYFNPLEKTAEQLAKSKHTGTMGPLRAPSNLRATSRFDYQPDICKDYKETGFCGYGDNCKFMHDRSNYKAGWQIEKEWEEEQRKKKARLARGNRGDEGSNQDYPSQTESDKPFACFICRNPFTKPVVTKCKHYFCQKCALEHYSTSPKCAACGKPTGGIFNKA 277          
BLAST of mRNA_D-dudresnayi_contig9782.28590.1 vs. uniprot
Match: A0A836CP80_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP80_9STRA)

HSP 1 Score: 210 bits (535), Expect = 2.130e-63
Identity = 96/174 (55.17%), Postives = 125/174 (71.84%), Query Frame = 1
Query:  187 KDTNQIASSKAAGTFGPMRAPSFLRATSRFDYQPDICKDYKETGFCGYGDQCKFLHDRGDYKSGWQMEREWEDKQ----AAKKALE-----------------EENYEIQEEAEFPFACHICREGFKDPVVTLCGHYFCQQCAIDSSKKNTKCVVCDKQTFGIFNKARKLIKYM 645
            K  +Q+A +K  GT GP+RAP + R TS FDYQPDICKDYKETG+CG+GD CKF+HDRGDYK+GWQ EREWE+KQ    AA+ ALE                 ++ Y + E+ + PFAC ICRE F+DPVVT CGH+FC+ CA+D+ K++T+C  C KQT G+FN AR+L+++M
Sbjct:  154 KSQSQVAGNKHTGTQGPIRAPQYARTTSVFDYQPDICKDYKETGYCGFGDSCKFMHDRGDYKAGWQQEREWEEKQKKRRAAQAALEAWGGEGERPVEDDDGSGDDKYAVDEDGDLPFACFICREAFRDPVVTNCGHHFCEACAMDNYKRSTRCAACGKQTGGVFNFARRLVEHM 327          
BLAST of mRNA_D-dudresnayi_contig9782.28590.1 vs. uniprot
Match: A0A1X7UH35_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UH35_AMPQE)

HSP 1 Score: 209 bits (531), Expect = 2.660e-63
Identity = 111/230 (48.26%), Postives = 148/230 (64.35%), Query Frame = 1
Query:   52 KLAKVTTVYESARDVVPKSYA-GDAFATVEIDTSHDRDARAISERSKDTNQIASSK-------------------------AAGTFGPMRAPSFLRATSRFDYQPDICKDYKETGFCGYGDQCKFLHDRGDYKSGWQMEREWEDKQAAKKALEEENYEIQEEAE-FPFACHICREGFKDPVVTLCGHYFCQQCAIDSSKKNTKCVVCDKQTFGIFNKARKLIKYMEQQQQ 660
            KL  + T YES+R    +    G A AT+E +T HDRDARAI ERSK  N+    K                         AA   GP+RAP+FLRAT+R+DYQPDICKDYKETG CG+GD CKFLHDRGDYKSGW++E+EWE+   +K+ + E      +EA+  PFAC+ICR  FKDP+VT C HYFC+ CA++  ++ T+C VC++ T GIFN A++++  + + +Q
Sbjct:   95 KLKSIFT-YESSRTQESEGPTDGGATATLETETLHDRDARAIFERSKAMNETLKGKKSDNLYRGQNNYTKYVEARDSAQMNAANKKGPIRAPTFLRATTRWDYQPDICKDYKETGTCGFGDTCKFLHDRGDYKSGWELEKEWEN---SKEEITEFEINDDDEADDLPFACYICRGDFKDPIVTRCRHYFCESCALNQYRQTTRCAVCNRNTGGIFNPAKEMVAKLSKSEQ 320          
BLAST of mRNA_D-dudresnayi_contig9782.28590.1 vs. uniprot
Match: A0A3B4A3R9_9GOBI (Ring finger protein 113A n=2 Tax=Oxudercinae TaxID=497678 RepID=A0A3B4A3R9_9GOBI)

HSP 1 Score: 208 bits (529), Expect = 4.120e-63
Identity = 115/236 (48.73%), Postives = 142/236 (60.17%), Query Frame = 1
Query:   31 SGDSEEVKLAKVTTVYESARDVVPKSYAG-DAFATVEIDTSHDRDARAISERS----------------------------KDTNQIASSKAAGTFGPMRAPSFLRATSRFDYQPDICKDYKETGFCGYGDQCKFLHDRGDYKSGWQMEREWEDKQAAKKALEEENYEIQ-EEAEFPFACHICREGFKDPVVTLCGHYFCQQCAIDSSKKNTKCVVCDKQTFGIFNKARKLIKYME 648
            S DS+E K  KVT  Y+S R   P+      A AT ++DT  D DA+AI ERS                            KDT    +S      GP+RAP  LRAT R+DYQPDICKDYKETGFCG+GD CKFLHDR DYK GWQ+ERE E+ +    A EEENYE+  +E + PF C ICRE FK P+VT C HYFC+ CA+   +K+ +C VC+ QT G+FN A++L+  ME
Sbjct:   74 SSDSDEEKEGKVTVAYKSTRSAKPEGPEDMGATATYQLDTERDNDAQAIFERSQKIQEEISGKEDDKIYRGINNYQKFIKPKDTTMGNASSGMVRKGPIRAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELEEGRYG--ANEEENYEVSSDEEDMPFKCFICRESFKKPIVTKCKHYFCEACALQHYRKSKRCYVCNTQTNGVFNPAKELMAKME 307          
BLAST of mRNA_D-dudresnayi_contig9782.28590.1 vs. uniprot
Match: H3GHT1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHT1_PHYRM)

HSP 1 Score: 207 bits (528), Expect = 7.750e-63
Identity = 114/252 (45.24%), Postives = 153/252 (60.71%), Query Frame = 1
Query:   19 NSGTSGDSEEVKLAKVTTVYESARDVVPKSYAGDAFATVEIDTSHDRDARAISERS----------------------------KDTNQIASSKAAGTFGPMRAPSFLRATSRFDYQPDICKDYKETGFCGYGDQCKFLHDRGDYKSGWQMEREWEDKQAAKKALEEENYEI-----------QEEAEFPFACHICREGFKDPVVTLCGHYFCQQCAIDSSKKNTKCVVCDKQTFGIFNKARKL-IKYMEQQ 654
            N+ ++G +++ K    T + ES R++VP+ YAGDA    +IDT  DRDARA+ ERS                            K  +QI  +K  GT GP+RA ++ RA SRFDYQPDICKDYKETGFCGYGD CKFLHDRGDYKSGWQ+E+E+ +K+  ++   +E  +            + E E  FAC ICR  F++ V T+CGH+FC+ CA+   KK+++C  C KQT G+FN A KL +K  E+Q
Sbjct:   44 NTFSTGGAKKAKNVVQTRLIESEREIVPQQYAGDATYETQIDTEKDRDARAVMERSIKANQDGSADADSGKVYRGQAAYKSYIIKKESQIGMNKYTGTQGPIRAQTWARAISRFDYQPDICKDYKETGFCGYGDSCKFLHDRGDYKSGWQIEKEYAEKEKKRQKRLQEGRDPXXXXXXXXXXKESEKEDQFACTICRGPFRNAVETICGHFFCETCALKQFKKSSRCFNCKKQTNGVFNAAEKLRVKEREEQ 295          
BLAST of mRNA_D-dudresnayi_contig9782.28590.1 vs. uniprot
Match: A0A2I4D3N0_9TELE (RING finger protein 113A-like n=3 Tax=Rivulidae TaxID=28771 RepID=A0A2I4D3N0_9TELE)

HSP 1 Score: 206 bits (523), Expect = 3.110e-62
Identity = 111/236 (47.03%), Postives = 144/236 (61.02%), Query Frame = 1
Query:   31 SGDSEEVKLAKVTTVYESARDVVPKSYAG-DAFATVEIDTSHDRDARAISERS----------------------------KDTNQIASSKAAGTFGPMRAPSFLRATSRFDYQPDICKDYKETGFCGYGDQCKFLHDRGDYKSGWQMEREWEDKQAAKKALEEENYEIQ-EEAEFPFACHICREGFKDPVVTLCGHYFCQQCAIDSSKKNTKCVVCDKQTFGIFNKARKLIKYME 648
            S +SE+ K  K+T  Y+S R   P+      A AT ++DT  D+DA+AI ERS                            KDT    +S      GP+RAP  LRAT R+DYQPDICKDYKETGFCG+GD CKFLHDR DYK GWQ+ERE ++ +    A +EENYE+  +E +FPF C ICRE FK+P++T C HYFC+ CA+   +K+ +C VC+ QT G+FN A++L   ME
Sbjct:   73 SSESEDDKEDKITVAYKSTRSAKPEGPEDMGATATYQLDTERDKDAQAIFERSQKIQEELTGKEDDKIYRGINNYQKFIKPKDTTMGNASSGMVRKGPIRAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGRYG--ANDEENYEVSSDEEDFPFKCFICRESFKNPIITKCRHYFCESCALQHYRKSKRCYVCNTQTNGVFNPAKELXAKME 306          
BLAST of mRNA_D-dudresnayi_contig9782.28590.1 vs. uniprot
Match: Q28EQ7_XENTR (RING finger protein 113A n=5 Tax=Xenopus TaxID=8353 RepID=Q28EQ7_XENTR)

HSP 1 Score: 205 bits (521), Expect = 5.880e-62
Identity = 114/244 (46.72%), Postives = 151/244 (61.89%), Query Frame = 1
Query:   31 SGDSEEVKLAKVTTV-YESARDVVPKSYAG-DAFATVEIDTSHDRDARAISERS----------------------------KDTNQIASSKAAGTFGPMRAPSFLRATSRFDYQPDICKDYKETGFCGYGDQCKFLHDRGDYKSGWQMEREWEDKQAAKKALEEENYEIQ-EEAEFPFACHICREGFKDPVVTLCGHYFCQQCAIDSSKKNTKCVVCDKQTFGIFNKARKLIKYMEQQQQQQG 669
            S   +E K AK  TV Y+S R   P       A AT E+DT  D+DA+AI ERS                            KDT+   +S      GP+RAP  LRAT R+DYQPDICKDYKETGFCG+GD CKFLHDR DYK GWQ+ERE E+ +    A +EENYE+  +E +FPF C ICR+ FK+P++T C HYFC++CA++  +K+ +C VC+ QT G+FN A++LI  +E+ + ++G
Sbjct:   69 SSSEDEDKTAKSITVSYKSTRSAKPVGPDDMGATATYELDTEKDKDAQAIFERSQKVQEELKGKEDDKIYRGIHNYQKFVKPKDTSMGNASSGMVRKGPIRAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQLERELEEGRYG--ANDEENYEVSSDEEDFPFKCFICRDSFKNPIITKCKHYFCEKCALEHYRKSKRCYVCNTQTNGVFNPAKELIAKLEKHKAEEG 310          
BLAST of mRNA_D-dudresnayi_contig9782.28590.1 vs. uniprot
Match: A0A8C5NCX1_9TELE (Ring finger protein 113A n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5NCX1_9TELE)

HSP 1 Score: 205 bits (521), Expect = 6.410e-62
Identity = 115/239 (48.12%), Postives = 145/239 (60.67%), Query Frame = 1
Query:   31 SGDSEEVK-LAKVTTVYESARDVVPKSYAG-DAFATVEIDTSHDRDARAISERS----------------------------KDTNQIASSKAAGTFGPMRAPSFLRATSRFDYQPDICKDYKETGFCGYGDQCKFLHDRGDYKSGWQMEREWEDKQAAKKALEEENYEIQ-EEAEFPFACHICREGFKDPVVTLCGHYFCQQCAIDSSKKNTKCVVCDKQTFGIFNKARKLIKYMEQQ 654
            S +SEE K   KVT  Y+S R   P+      A AT ++DT  D+DA+AI ERS                            KDT    +S      GP+RAP  LRAT R+DYQPDICKDYKETGFCG+GD CKFLHDR DYK GWQ+ERE E+ +    A +EENYE+  +E + PF C ICRE FK P++T C HYFC+ CA+   +K+ +C VC+ QT G+FN A++LI  ME+Q
Sbjct:   73 SSESEEEKDEKKVTVAYKSTRSAKPEGPEDMGATATYQLDTERDKDAQAIFERSQKIQEELTGKEDDKIYRGNNNYKKFIKPKDTTMGNASSGMVRKGPIRAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELEEGRYG--ANDEENYEVSSDEEDLPFKCFICRESFKSPIITKCRHYFCEACALQHYRKSQRCYVCNTQTNGVFNPAKELIAKMEKQ 309          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9782.28590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1N7Z0_HETAK9.470e-7751.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7G1F0_ECTSI1.400e-6650.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6S8G1U0_9STRA3.490e-6549.33Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A836CP80_9STRA2.130e-6355.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1X7UH35_AMPQE2.660e-6348.26Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A3B4A3R9_9GOBI4.120e-6348.73Ring finger protein 113A n=2 Tax=Oxudercinae TaxID... [more]
H3GHT1_PHYRM7.750e-6345.24Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A2I4D3N0_9TELE3.110e-6247.03RING finger protein 113A-like n=3 Tax=Rivulidae Ta... [more]
Q28EQ7_XENTR5.880e-6246.72RING finger protein 113A n=5 Tax=Xenopus TaxID=835... [more]
A0A8C5NCX1_9TELE6.410e-6248.12Ring finger protein 113A n=1 Tax=Gouania willdenow... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9782contigD-dudresnayi_contig9782:9450..10223 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score223.8
Seed ortholog evalue8.1e-56
Seed eggNOG ortholog2880.D7G1F0
Preferred nameRNF113A
KEGG koko:K03661,ko:K13127,ko:K15696
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04142,ko04145,ko04721,ko05110,ko05120,ko05152,ko05323,map00190,map01100,map04142,map04145,map04721,map05110,map05120,map05152,map05323
KEGG ModuleM00160
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006725,GO:0006807,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008270,GO:0008380,GO:0009987,GO:0010467,GO:0010468,GO:0016020,GO:0016070,GO:0016071,GO:0016074,GO:0016567,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0022008,GO:0030154,GO:0030182,GO:0031323,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0034247,GO:0034470,GO:0034641,GO:0034660,GO:0036211,GO:0043144,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043484,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0046872,GO:0046914,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070647,GO:0071704,GO:0080090,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1990904
EggNOG free text desc.snoRNA splicing
EggNOG OGsCOG5152@1,KOG1813@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041,ko04121
Hectar predicted targeting categoryother localisation
Exons2
Model size672
Cds size672
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930935.3357573-CDS-D-dudresnayi_contig9782:9449..98761622930935.3357573-CDS-D-dudresnayi_contig9782:9449..9876Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9782 9450..9876 +
1690557971.3564332-CDS-D-dudresnayi_contig9782:9449..98761690557971.3564332-CDS-D-dudresnayi_contig9782:9449..9876Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9782 9450..9876 +
1622930935.3521686-CDS-D-dudresnayi_contig9782:9978..102231622930935.3521686-CDS-D-dudresnayi_contig9782:9978..10223Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9782 9979..10223 +
1690557971.3717978-CDS-D-dudresnayi_contig9782:9978..102231690557971.3717978-CDS-D-dudresnayi_contig9782:9978..10223Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9782 9979..10223 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9782.28590.1prot_D-dudresnayi_contig9782.28590.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9782 9450..10223 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9782.28590.1

>prot_D-dudresnayi_contig9782.28590.1 ID=prot_D-dudresnayi_contig9782.28590.1|Name=mRNA_D-dudresnayi_contig9782.28590.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=224bp
TSKAGNNSGTSGDSEEVKLAKVTTVYESARDVVPKSYAGDAFATVEIDTS
HDRDARAISERSKDTNQIASSKAAGTFGPMRAPSFLRATSRFDYQPDICK
DYKETGFCGYGDQCKFLHDRGDYKSGWQMEREWEDKQAAKKALEEENYEI
QEEAEFPFACHICREGFKDPVVTLCGHYFCQQCAIDSSKKNTKCVVCDKQ
TFGIFNKARKLIKYMEQQQQQQG*
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mRNA from alignment at D-dudresnayi_contig9782:9450..10223+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9782.28590.1 ID=mRNA_D-dudresnayi_contig9782.28590.1|Name=mRNA_D-dudresnayi_contig9782.28590.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=774bp|location=Sequence derived from alignment at D-dudresnayi_contig9782:9450..10223+ (Desmarestia dudresnayi DdudBR16 monoicous)
ACAAGTAAAGCAGGAAACAATTCAGGCACCAGTGGGGATTCAGAGGAAGT AAAACTAGCTAAAGTTACCACAGTTTATGAATCTGCTCGAGATGTTGTTC CCAAATCTTATGCAGGTGATGCTTTTGCAACTGTAGAAATTGATACATCT CATGATAGAGATGCTCGTGCTATATCTGAAAGATCCAAAGACACCAATCA AATAGCTTCCAGTAAAGCAGCCGGAACGTTCGGTCCGATGAGAGCACCAA GCTTTTTACGTGCAACTTCTCGATTTGATTACCAACCAGATATATGTAAA GATTATAAAGAAACCGGCTTTTGTGGTTATGGTGATCAATGTAAGTTTCT GCACGATCGTGGCGACTACAAATCTGGCTGGCAGATGGAGAGAGAGTGGG AAGATAAACAAGCAGCGAAAAAAGCACGTATACAGAAACTAGAAGAGAAC GCATTAGCAGCAATGAATAGTAGTAGTGGCATAGATGTGCGCTCTGTAAG AGCAGCACAGAATGAAACGGCTGACGAAGTAGAGGAGGAGAACTATGAGA TCCAAGAAGAAGCGGAGTTTCCCTTCGCCTGTCATATATGCAGAGAAGGA TTCAAAGACCCAGTTGTGACTCTATGCGGTCACTATTTCTGCCAGCAGTG TGCAATCGATAGCAGCAAGAAGAACACCAAGTGTGTAGTGTGCGATAAGC AGACATTTGGTATATTCAACAAGGCACGCAAGCTGATTAAATACATGGAA CAGCAGCAGCAACAACAAGGATAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9782:9450..10223+

>mRNA_D-dudresnayi_contig9782.28590.1 ID=mRNA_D-dudresnayi_contig9782.28590.1|Name=mRNA_D-dudresnayi_contig9782.28590.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1344bp|location=Sequence derived from alignment at D-dudresnayi_contig9782:9450..10223+ (Desmarestia dudresnayi DdudBR16 monoicous)
ACAAGTAAAGCAGGAAACAATTCAGGCACCAGTGGGGATTCAGAGGAAGT
AAAACTAGCTAAAGTTACCACAGTTTATGAATCTGCTCGAGATGTTGTTC
CCAAATCTTATGCAGGTGATGCTTTTGCAACTGTAGAAATTGATACATCT
CATGATAGAGATGCTCGTGCTATATCTGAAAGATCCAAAGACACCAATCA
AATAGCTTCCAGTAAAGCAGCCGGAACGTTCGGTCCGATGAGAGCACCAA
GCTTTTTACGTGCAACTTCTCGATTTGATTACCAACCAGATATATGTAAA
GATTATAAAGAAACCGGCTTTTGTGGTTATGGTGATCAATGTAAGTTTCT
GCACGATCGTGGCGACTACAAATCTGGCTGGCAGATGGAGAGAGAGTGGG
AAGATAAACAAGCAGCGAAAAAAGCACACAAGTAAAGCAGGAAACAATTC
AGGCACCAGTGGGGATTCAGAGGAAGTAAAACTAGCTAAAGTTACCACAG
TTTATGAATCTGCTCGAGATGTTGTTCCCAAATCTTATGCAGGTGATGCT
TTTGCAACTGTAGAAATTGATACATCTCATGATAGAGATGCTCGTGCTAT
ATCTGAAAGATCCAAAGACACCAATCAAATAGCTTCCAGTAAAGCAGCCG
GAACGTTCGGTCCGATGAGAGCACCAAGCTTTTTACGTGCAACTTCTCGA
TTTGATTACCAACCAGATATATGTAAAGATTATAAAGAAACCGGCTTTTG
TGGTTATGGTGATCAATGTAAGTTTCTGCACGATCGTGGCGACTACAAAT
CTGGCTGGCAGATGGAGAGAGAGTGGGAAGATAAACAAGCAGCGAAAAAA
GCACTAGAGGAGGAGAACTATGAGATCCAAGAAGAAGCGGAGTTTCCCTT
CGCCTGTCATATATGCAGAGAAGGATTCAAAGACCCAGTTGTGACTCTAT
GCGGTCACTATTTCTGCCAGCAGTGTGCAATCGATAGCAGCAAGAAGAAC
ACCAAGTGTGTAGTGTGCGATAAGCAGACATTTGGTATATTCAACAAGGC
ACGCAAGCTGATTAAATACATGGAACAGCAGCAGCAACAACAAGGATAAT
AGAGGAGGAGAACTATGAGATCCAAGAAGAAGCGGAGTTTCCCTTCGCCT
GTCATATATGCAGAGAAGGATTCAAAGACCCAGTTGTGACTCTATGCGGT
CACTATTTCTGCCAGCAGTGTGCAATCGATAGCAGCAAGAAGAACACCAA
GTGTGTAGTGTGCGATAAGCAGACATTTGGTATATTCAACAAGGCACGCA
AGCTGATTAAATACATGGAACAGCAGCAGCAACAACAAGGATAA
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