mRNA_D-dudresnayi_contig9765.28566.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9765.28566.1
Unique NamemRNA_D-dudresnayi_contig9765.28566.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9765.28566.1 vs. uniprot
Match: A0A7S3H4C4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4C4_9STRA)

HSP 1 Score: 160 bits (406), Expect = 4.460e-47
Identity = 77/102 (75.49%), Postives = 90/102 (88.24%), Query Frame = 1
Query:  445 KNLVLGGCYSGQILLWDTRLNKTLPVQRSSMSGGGHKHPVYAMAMTSSAVAAELVSVSTDGMLCHWDAARLADPVSVVQLHMPTLSTSGGMSLSGFLSPVRD 750
            ++LVLGGCYSGQILLWD +LNK LPVQRSSMSG GHKHPVYAMAMT+SAVAAEL+SVSTDG+LCHWD  RL +P+SVVQLH+P LS++    +SG LSPVR+
Sbjct:    1 QHLVLGGCYSGQILLWDMKLNKALPVQRSSMSGKGHKHPVYAMAMTTSAVAAELISVSTDGLLCHWDVTRLTEPLSVVQLHVPALSSNPLSLMSGLLSPVRE 102          
BLAST of mRNA_D-dudresnayi_contig9765.28566.1 vs. uniprot
Match: A0A6A6D0E0_9PEZI (Uncharacterized protein n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6D0E0_9PEZI)

HSP 1 Score: 147 bits (371), Expect = 6.240e-37
Identity = 87/241 (36.10%), Postives = 134/241 (55.60%), Query Frame = 1
Query:    1 LLPEECTRIISNKKFEKFLQTSSLYVERAMALTEEHDVIRDFMVDDSNTAEDGEHSAFILPPPGSSSSITNATGCYEEDQLVG--RPVMALQWSHLLPGLFLAAYAKSSGMTEEDAPGMVCVWDRDMHARPEFRLTASSPVLTAVFHSHEKNLVLGGCYSGQILLWDTRLNKTL---PVQRSSMSGG--GHKHPVYAMAMTSSAVAAELVSVSTDGMLCHWDAARLADPVSVVQLHMPTLS 702
            L PEE + + S+  F  F++ SS  +ERA  L EE+DV+ D+ +D  +  +D E+        G           ++ D ++G  R +  + +S   P LF  AY KS   +    PG++ VW+  +  RPE+ L A+S +L+  FH H  +L+LGG YSGQ+ LWDTR        PVQ++ ++GG  GH HPVY++A+  +  A+ +VSVSTDG++C W    L  P   +++H P  S
Sbjct:  216 LAPEELSAVTSSNDFLDFVERSSKVIERA--LDEEYDVLADYALDSRDVEDDDEYV-------GRRGRRVKEVAQFDLDDVMGTKRMISDIDFSPKFPELFCTAYTKSQ-RSPHTPPGLLNVWNMHLKGRPEYSLHATSDLLSCQFHPHHPSLILGGTYSGQLCLWDTRARNQRTGEPVQKTPLTGGRTGHAHPVYSLAVVGTQNASSVVSVSTDGVVCAWSTDILTQPQEYLEMHSPNPS 446          
BLAST of mRNA_D-dudresnayi_contig9765.28566.1 vs. uniprot
Match: A0A0P1BI87_9BASI (Cytoplasmic dynein intermediate chain n=2 Tax=Ceraceosorus TaxID=401624 RepID=A0A0P1BI87_9BASI)

HSP 1 Score: 147 bits (371), Expect = 7.970e-37
Identity = 91/244 (37.30%), Postives = 134/244 (54.92%), Query Frame = 1
Query:   13 ECTRIISNKKFEKFLQTSSLYVERAMALTEEHDVIRDFMVDDSNTAEDGEHSAFILPPPGSSSSITNATGCYEEDQLV-GRPVMALQWSHLLPGLFLAAYAKSSGMTEEDAPGMVCVWDRDMHARPEFRLTASSPVLTAVFHSHEKNLVLGGCYSGQILLWDTRLNKTLPVQRSSMSGGGHKHPVYAMAMTSSAVAAELVSVSTDGMLCHWDAARLADPVSVVQLHMPTLSTSGGMSLSGFLSP 741
            E   I   + F  F+QTSS  VERA  LT+ +D ++D+  D+S   ++ E                     + +D+L  GR V  L WS   P L +A+Y++S  ++ ED  G+V VW+  +  RPEF   A + VL+  F     NLV+GG YSGQIL+WDTR + TLPV ++ +S  GH HPVY++ +  +  A  LVS STDG++C W    LA P  V++L  P  + +  +S++ F  P
Sbjct:  245 ELNSIYGAQDFTSFVQTSSKIVERA--LTDAYDFMKDYTKDESGAGDEAEARQ------------VKVVRTFWDDKLCRGRSVTDLDWSARHPELSVASYSRSDAISNEDPDGVVAVWNMHLADRPEFVFHAQTDVLSTKFSPFNPNLVVGGTYSGQILIWDTR-SGTLPVLKTPLSAAGHTHPVYSLQIVGTQNAHNLVSASTDGLVCGWMMDVLAKPSEVLELLSPHHTKTDEVSVTSFGFP 473          
BLAST of mRNA_D-dudresnayi_contig9765.28566.1 vs. uniprot
Match: E3JWL4_PUCGT (Dynein intermediate chain, cytosolic n=11 Tax=Puccinia TaxID=5296 RepID=E3JWL4_PUCGT)

HSP 1 Score: 146 bits (369), Expect = 1.470e-36
Identity = 91/251 (36.25%), Postives = 137/251 (54.58%), Query Frame = 1
Query:    7 PEECTRIISNKKFEKFLQTSSLYVERAMALTEEHDVIRDFMVD--DSNTAEDGEHSAFILPPPGSSSSITNATGCYEEDQLVGRPVMALQWSHLLPGLFLAAYAKS-SGMTEEDAPGMVCVWDRDMHARPEFRLTASSPVLTAVFHSHEKNLVLGGCYSGQILLWDTRLNKTLPVQRSSMSGGGHKHPVYAMAMTSSAVAAELVSVSTDGMLCHWDAARLADPVSVVQLHMPTLSTSGGMSLSGFLSPVRD 750
            P     I S+ +F +FL++SS  ++RA  L++ +D ++D+ V+  D +  +D E              +  +   YEE  L  R V  L WS   P L LA+Y K+ SG+ E D  G+VCVW+  +  RPE+   A S VL+A F     NLV+GG YSGQIL+WD R  K LPV ++ +S  GH HPVY+ ++  +  +  L+S STDG +C W    LA P  ++++  P+   +  MS + F  P  +
Sbjct:  251 PRTLATIYSDAEFNEFLESSSKIIQRA--LSDGYDYLKDYSVNFGDEDGIDDREGKR-----------VKRSCEFYEEKLLKNRSVTDLDWSTKNPELSLASYNKNPSGINEPD--GLVCVWNLHLLDRPEYTFHAQSDVLSATFSPFHPNLVIGGTYSGQILIWDIRHRKQLPVLKTPLSSSGHTHPVYSTSIIGTQNSHNLISASTDGTICSWALDMLAQPQDLIEVLNPSHHRTDEMSPTCFSLPANE 486          
BLAST of mRNA_D-dudresnayi_contig9765.28566.1 vs. uniprot
Match: A0A4V1Y0V9_9PEZI (Uncharacterized protein n=8 Tax=Monosporascus TaxID=155415 RepID=A0A4V1Y0V9_9PEZI)

HSP 1 Score: 146 bits (369), Expect = 1.480e-36
Identity = 86/231 (37.23%), Postives = 129/231 (55.84%), Query Frame = 1
Query:    1 LLPEECTRIISNKKFEKFLQTSSLYVERAMALTEEHDVIRDFMVDDSNTAEDGEHSAFILPPPGSSSSITNATGCYEEDQLVGRPVMALQWSHLLPGLFLAAYAKSSGMTEEDAPGMVCVWDRDMHARPEFRLTASSPVLTAVFHSHEKNLVLGGCYSGQILLWDTRLNKTLPVQRSSMSGGGHKHPVYAMAMTSSAVAAELVSVSTDGMLCHWDAARLADPVSVVQLHMP 693
            L  EE   + ++ +F  F++ S+  +ERA+ ++ ++D++RD+ +  +   ED E  A      G    I      Y++     R V +L +S   P L LA+Y K+      D  G+V VW+R +H RPEF   A S +LTA F     NL++GG YSGQ+LLWDTR  K+ PVQ++ ++G GH HPVY++ +  +  A  +VSVSTDG LC W    L+ P   + L  P
Sbjct:  233 LSDEELAALTASDEFVDFVERSTKVIERALDISNDYDILRDYSLQ-AQDIEDEEDQAGNTAGKGRR-RIKEVVQFYDDRWSKKRMVSSLDFSPTFPELLLASYTKNPS-APHDPDGVVQVWNRHLHDRPEFLFHAQSDILTAKFSPFHPNLIIGGTYSGQVLLWDTRA-KSAPVQKTPLTGSGHSHPVYSVDIVGTQNANNIVSVSTDGALCVWSVDMLSQPQESLTLLTP 459          
BLAST of mRNA_D-dudresnayi_contig9765.28566.1 vs. uniprot
Match: K2SH47_MACPH (Uncharacterized protein n=1 Tax=Macrophomina phaseolina (strain MS6) TaxID=1126212 RepID=K2SH47_MACPH)

HSP 1 Score: 144 bits (364), Expect = 1.880e-36
Identity = 87/247 (35.22%), Postives = 134/247 (54.25%), Query Frame = 1
Query:   10 EECTRIISNKKFEKFLQTSSLYVERAMALTEEHDVIRDFMVDDSNTAEDGEHSAFILPPPGSSSSITNATGCYEEDQLVGRPVMALQWSHLLPGLFLAAYAKSSGMTEEDAPGMVCVWDRDMHARPEFRLTASSPVLTAVFHSHEKNLVLGGCYSGQILLWDTRLNKTLPVQRSSMSGGGHKHPVYAMAMTSSAVAAELVSVSTDGMLCHWDAARLADPVSVVQLHMPTLSTSGGMSLSGFLSPVRD 750
            EE   + S+++F +F++ SS  +ERA  L EE+D++ D+ +     AED +   F          +   T  Y+E     R +  L +S   P L LA+Y K+      D  G++ VW+  MH RPE+   A S +LTA F     NL++GG YSGQ+LLWDTR  K+ PVQ++ ++G GH HPVYA+ +  +  A  ++S STDG++C W    L+ P   ++L  P  + +  M+ +    P  D
Sbjct:   75 EELNAVTSSEEFLEFVERSSKVIERA--LDEEYDLLVDYALAGVEEAEDDD-DGFGTAKGKKGRRVRELTQFYDERWSKKRMISDLNFSQKFPELVLASYTKNPS-APHDPDGLIQVWNMHMHDRPEYIFHAQSDILTAQFSPFHPNLIIGGAYSGQVLLWDTRA-KSQPVQKTPLTGSGHTHPVYAIDIVGTQNANNIISCSTDGVVCGWTVDMLSQPQEFLELISPPPAKTEDMAPTCIAFPQSD 316          
BLAST of mRNA_D-dudresnayi_contig9765.28566.1 vs. uniprot
Match: M2LH04_BAUPA (Uncharacterized protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2LH04_BAUPA)

HSP 1 Score: 145 bits (366), Expect = 3.070e-36
Identity = 88/241 (36.51%), Postives = 133/241 (55.19%), Query Frame = 1
Query:    1 LLPEECTRIISNKKFEKFLQTSSLYVERAMALTEEHDVIRDFMVDDSNTAEDGEHSAFILPPPGSSSSITNATGCYEEDQLVG--RPVMALQWSHLLPGLFLAAYAKSSGMTEEDAPGMVCVWDRDMHARPEFRLTASSPVLTAVFHSHEKNLVLGGCYSGQILLWDTRLNKTL---PVQRSSMSGG--GHKHPVYAMAMTSSAVAAELVSVSTDGMLCHWDAARLADPVSVVQLHMPTLS 702
            L PEE   + S+  F  F++ SS  +ERA  L EE+DV+ D+ +  S TAE+ E         G           +     +G  R + +L +S   P L   AY KS   +    PG++ VW+  +  RPE+ L A+S +L+ +FH H  +L+LGG YSGQ+ LWDTR+  T    PVQ++ ++GG  GH HP+Y++A+  +  A+ ++SVSTDG++C W    L  P   ++LH P  S
Sbjct:  217 LAPEELNAVTSSNDFLDFIERSSKVIERA--LDEEYDVLADYALH-SRTAEEDEDEYI-----GRRGRRIKEVASFPLADTLGLKRMISSLDFSPKFPELLCTAYTKSQA-SPHTPPGLLNVWNLHLKGRPEYSLHATSDILSCLFHPHHPSLILGGTYSGQLCLWDTRVRHTRTGEPVQKTPLTGGRTGHAHPIYSLAVVGTQNASSIISVSTDGVVCAWSTDMLTTPQEFLELHSPNPS 448          
BLAST of mRNA_D-dudresnayi_contig9765.28566.1 vs. uniprot
Match: A0A2J6SGD3_9HELO (WD40 repeat-like protein n=3 Tax=Hyaloscypha hepaticicola/Rhizoscyphus ericae species complex TaxID=186449 RepID=A0A2J6SGD3_9HELO)

HSP 1 Score: 145 bits (366), Expect = 3.540e-36
Identity = 86/231 (37.23%), Postives = 125/231 (54.11%), Query Frame = 1
Query:    1 LLPEECTRIISNKKFEKFLQTSSLYVERAMALTEEHDVIRDFMVDDSNTAEDGEHSAFILPPPGSSSSITNATGCYEEDQLVGRPVMALQWSHLLPGLFLAAYAKSSGMTEEDAPGMVCVWDRDMHARPEFRLTASSPVLTAVFHSHEKNLVLGGCYSGQILLWDTRLNKTLPVQRSSMSGGGHKHPVYAMAMTSSAVAAELVSVSTDGMLCHWDAARLADPVSVVQLHMP 693
            L  EE   + S++ F  F++ SS  +ERA  L EE+D++ D+ +   N  ED +         G    +      Y+E     R +  + +S   P L LAAY K+      D  G+V VW+  +H RPEF   A S VL A F     NL++GGCYSGQ+LLWDTR  K+ PVQ++ ++G GH HPVY++ +  +  A  ++S STDG++C W    LA P  ++ L  P
Sbjct:  235 LTTEELNAVTSSEDFMDFVERSSKVIERA--LDEEYDILADYALSGENGVEDDDDEYGNTRGKGRR-RVKEIAQFYDERWSKKRMISDISFSPKFPELVLAAYTKNPS-APHDPDGLVQVWNMHLHDRPEFVFHAQSDVLAAKFSPFHPNLIIGGCYSGQVLLWDTRA-KSSPVQKTPLTGSGHTHPVYSVDIVGTQNANNIISCSTDGVVCGWTVDMLAQPQELLTLTTP 460          
BLAST of mRNA_D-dudresnayi_contig9765.28566.1 vs. uniprot
Match: K1X7I4_MARBU (WD domain-containing protein n=1 Tax=Marssonina brunnea f. sp. multigermtubi (strain MB_m1) TaxID=1072389 RepID=K1X7I4_MARBU)

HSP 1 Score: 145 bits (365), Expect = 4.580e-36
Identity = 88/250 (35.20%), Postives = 132/250 (52.80%), Query Frame = 1
Query:    1 LLPEECTRIISNKKFEKFLQTSSLYVERAMALTEEHDVIRDFMVDDSNTAEDGEHSAFILPPPGSSSSITNATGCYEEDQLVGRPVMALQWSHLLPGLFLAAYAKSSGMTEEDAPGMVCVWDRDMHARPEFRLTASSPVLTAVFHSHEKNLVLGGCYSGQILLWDTRLNKTLPVQRSSMSGGGHKHPVYAMAMTSSAVAAELVSVSTDGMLCHWDAARLADPVSVVQLHMPTLSTSGGMSLSGFLSPVRD 750
            L  EE   + S++ F  F++ SS  +ERA  L +E+D++ D+ +   N  ED +         G    +      Y+E     R +  + +S   P L LAAY K+      D  G+V VW+  +H RPEF   A S VL A F     NL++GGCYSGQ+LLWDTR  K+ PVQ++ ++G GH HPVY++ +  +  A  ++S STDG++C W    LA P  ++ L  P  + +  +S +    P  D
Sbjct:  217 LTHEELKAVTSSEDFMDFVERSSKVIERA--LDQEYDILADYALSGENGVEDDDDEYGNTRGKGRR-RVKEVAQFYDERWSKKRMISDINFSPKFPELVLAAYTKNPS-APHDPDGLVQVWNMHLHDRPEFVFHAQSDVLAAKFSPFHPNLIIGGCYSGQVLLWDTRA-KSAPVQKTPLTGSGHTHPVYSIDIVGTQNANNIISCSTDGVVCGWTVDMLAQPQELLTLTTPPPAKTEDLSPTCMAFPQTD 461          
BLAST of mRNA_D-dudresnayi_contig9765.28566.1 vs. uniprot
Match: UPI001D049FA8 (uncharacterized protein n=1 Tax=Bacidia gigantensis TaxID=2732470 RepID=UPI001D049FA8)

HSP 1 Score: 145 bits (365), Expect = 4.770e-36
Identity = 81/253 (32.02%), Postives = 139/253 (54.94%), Query Frame = 1
Query:    1 LLPEECTRIISNKKFEKFLQTSSLYVERAMALTEEHDVIRDFMVDDSNTAEDGEHSAFILPPPGSSSSITNATGCYEEDQLVGRPVMALQWSHLLPGLFLAAYAKSSGMTEEDAPGMVCVWDRDMHARPEFRLTASSPVLTAVFHSHEKNLVLGGCYSGQILLWDTRLNKTLPVQRSSMSG---GGHKHPVYAMAMTSSAVAAELVSVSTDGMLCHWDAARLADPVSVVQLHMPTLSTSGGMSLSGFLSPVRD 750
            L  EE + + S+ +F  F++ SS  +E+A  L +++DV+ D+ +D     ++ ++  +     G S  I      ++E     R    L +S   P L LAAY K+   T ++  G++ VW+  +H+RPE+    +S +LTA F     +L++GG Y+GQ+LLWDTR    LPVQ++ ++G   GGH HP+Y++++  +  A  ++S STDG++C W    L  P   ++L  P  S +  +S +    P+ D
Sbjct:  233 LTNEELSAVTSSNEFLDFVERSSKVIEKA--LDQDYDVLADYALDGVEAVDEDDNEGYGTTRGGKSRRIRQVAQFWDEKGSKKRMTSDLSFSPKFPELLLAAYTKNPS-TPQEPSGLLQVWNMHLHSRPEYTFQNTSDILTAQFSPFHPSLIIGGSYTGQVLLWDTRSRNRLPVQKTPLTGASSGGHTHPIYSISIVGTQNANNIISCSTDGVVCGWTTDMLTVPQEYLELTTPPPSKTEDLSPTCMSFPISD 482          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9765.28566.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3H4C4_9STRA4.460e-4775.49Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A6A6D0E0_9PEZI6.240e-3736.10Uncharacterized protein n=1 Tax=Zasmidium cellare ... [more]
A0A0P1BI87_9BASI7.970e-3737.30Cytoplasmic dynein intermediate chain n=2 Tax=Cera... [more]
E3JWL4_PUCGT1.470e-3636.25Dynein intermediate chain, cytosolic n=11 Tax=Pucc... [more]
A0A4V1Y0V9_9PEZI1.480e-3637.23Uncharacterized protein n=8 Tax=Monosporascus TaxI... [more]
K2SH47_MACPH1.880e-3635.22Uncharacterized protein n=1 Tax=Macrophomina phase... [more]
M2LH04_BAUPA3.070e-3636.51Uncharacterized protein n=1 Tax=Baudoinia panameri... [more]
A0A2J6SGD3_9HELO3.540e-3637.23WD40 repeat-like protein n=3 Tax=Hyaloscypha hepat... [more]
K1X7I4_MARBU4.580e-3635.20WD domain-containing protein n=1 Tax=Marssonina br... [more]
UPI001D049FA84.770e-3632.02uncharacterized protein n=1 Tax=Bacidia gigantensi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9765contigD-dudresnayi_contig9765:263..1133 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score152.1
Seed ortholog evalue3.4e-34
Seed eggNOG ortholog5297.GMQ_18430T0
KEGG koko:K10415
KEGG Pathwayko04145,ko04962,ko05132,map04145,map04962,map05132
GOsGO:0000003,GO:0000280,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005816,GO:0005856,GO:0005868,GO:0005875,GO:0005938,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007049,GO:0007097,GO:0007127,GO:0008150,GO:0009987,GO:0010970,GO:0015630,GO:0016043,GO:0022402,GO:0022414,GO:0030286,GO:0030473,GO:0030705,GO:0030863,GO:0030981,GO:0030989,GO:0032781,GO:0032991,GO:0035974,GO:0043085,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043462,GO:0044093,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045503,GO:0045504,GO:0046907,GO:0048285,GO:0050790,GO:0051179,GO:0051234,GO:0051321,GO:0051336,GO:0051345,GO:0051640,GO:0051641,GO:0051647,GO:0051649,GO:0051656,GO:0061982,GO:0065007,GO:0065009,GO:0071840,GO:0071944,GO:0072384,GO:0099111,GO:0099568,GO:0140013,GO:1902494,GO:1903046,GO:2000574,GO:2000576,GO:2000580,GO:2000582
EggNOG free text desc.WD domain, G-beta repeat
EggNOG OGs2YD3Z@29000,38GZ7@33154,3NWED@4751,3UXTV@5204,KOG1587@1,KOG1587@2759
COG Functional cat.Z
Best tax levelPucciniomycotina
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04812
Hectar predicted targeting categoryother localisation
Exons3
Model size753
Cds size753
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9765.28566.1prot_D-dudresnayi_contig9765.28566.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9765 263..1133 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930932.7893817-CDS-D-dudresnayi_contig9765:262..4691622930932.7893817-CDS-D-dudresnayi_contig9765:262..469Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9765 263..469 -
1690557970.2657764-CDS-D-dudresnayi_contig9765:262..4691690557970.2657764-CDS-D-dudresnayi_contig9765:262..469Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9765 263..469 -
1622930932.826751-CDS-D-dudresnayi_contig9765:545..7811622930932.826751-CDS-D-dudresnayi_contig9765:545..781Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9765 546..781 -
1690557970.2790644-CDS-D-dudresnayi_contig9765:545..7811690557970.2790644-CDS-D-dudresnayi_contig9765:545..781Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9765 546..781 -
1622930932.8529458-CDS-D-dudresnayi_contig9765:823..11331622930932.8529458-CDS-D-dudresnayi_contig9765:823..1133Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9765 824..1133 -
1690557970.2880478-CDS-D-dudresnayi_contig9765:823..11331690557970.2880478-CDS-D-dudresnayi_contig9765:823..1133Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9765 824..1133 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9765.28566.1

>prot_D-dudresnayi_contig9765.28566.1 ID=prot_D-dudresnayi_contig9765.28566.1|Name=mRNA_D-dudresnayi_contig9765.28566.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=251bp
LLPEECTRIISNKKFEKFLQTSSLYVERAMALTEEHDVIRDFMVDDSNTA
EDGEHSAFILPPPGSSSSITNATGCYEEDQLVGRPVMALQWSHLLPGLFL
AAYAKSSGMTEEDAPGMVCVWDRDMHARPEFRLTASSPVLTAVFHSHEKN
LVLGGCYSGQILLWDTRLNKTLPVQRSSMSGGGHKHPVYAMAMTSSAVAA
ELVSVSTDGMLCHWDAARLADPVSVVQLHMPTLSTSGGMSLSGFLSPVRD
A
back to top

mRNA from alignment at D-dudresnayi_contig9765:263..1133-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9765.28566.1 ID=mRNA_D-dudresnayi_contig9765.28566.1|Name=mRNA_D-dudresnayi_contig9765.28566.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=871bp|location=Sequence derived from alignment at D-dudresnayi_contig9765:263..1133- (Desmarestia dudresnayi DdudBR16 monoicous)
CTGCTTCCTGAAGAATGTACACGTATAATATCGAATAAGAAGTTTGAAAA GTTTCTGCAAACTTCTTCATTATATGTAGAGCGCGCTATGGCACTAACAG AAGAGCATGATGTGATTAGAGATTTCATGGTGGATGATAGTAATACTGCT GAAGATGGAGAACATTCTGCTTTTATATTACCACCACCTGGTAGTAGCAG TAGTATTACGAATGCTACTGGATGTTATGAAGAAGATCAGTTAGTAGGAC GACCAGTGATGGCTTTGCAATGGAGCCATCTCCTGCCGGGATTATTTCTT GCTGCCTATGGTTCGAAAACTACCAGTAGTAGTACTACCAAGGCTTCCTC AGCGAAGAGTAGTGGCATGACAGAAGAGGATGCACCTGGTATGGTTTGTG TATGGGATCGAGATATGCATGCACGTCCAGAGTTCCGCCTCACTGCGTCT TCTCCAGTGCTAACTGCAGTCTTCCACTCACATGAGAAGAATCTAGTCCT GGGTGGGTGTTATAGTGGACAGATACTGCTGTGGGATACTAGACTGAATA AGACGCTACCTGTGCAGCGCAGTAGCATGTCAGGTGGAGTTTGCAATTTA CTTTACTTATGATTTTACTCTATATACTTATGATTTCTATGTTTTATTTG GTCTAATAGGCAAGGGTCACAAGCATCCTGTGTATGCAATGGCCATGACC TCCTCTGCAGTGGCTGCTGAGCTGGTCTCTGTCAGTACTGATGGTATGTT GTGTCACTGGGATGCTGCACGCCTAGCGGATCCTGTCTCGGTTGTGCAGC TGCACATGCCTACACTCAGTACCAGTGGAGGGATGAGTCTATCAGGCTTC CTATCTCCTGTTCGCGATGCA
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig9765:263..1133-

>mRNA_D-dudresnayi_contig9765.28566.1 ID=mRNA_D-dudresnayi_contig9765.28566.1|Name=mRNA_D-dudresnayi_contig9765.28566.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1506bp|location=Sequence derived from alignment at D-dudresnayi_contig9765:263..1133- (Desmarestia dudresnayi DdudBR16 monoicous)
CTGCTTCCTGAAGAATGTACACGTATAATATCGAATAAGAAGTTTGAAAA
GTTTCTGCAAACTTCTTCATTATATGTAGAGCGCGCTATGGCACTAACAG
AAGAGCATGATGTGATTAGAGATTTCATGGTGGATGATAGTAATACTGCT
GAAGATGGAGAACATTCTGCTTTTATATTACCACCACCTGGTAGTAGCAG
TAGTATTACGAATGCTACTGGATGTTATGAAGAAGATCAGTTAGTAGGAC
GACCAGTGATGGCTTTGCAATGGAGCCATCTCCTGCCGGGATTATTTCTT
GCTGCCTATGCTGCTTCCTGAAGAATGTACACGTATAATATCGAATAAGA
AGTTTGAAAAGTTTCTGCAAACTTCTTCATTATATGTAGAGCGCGCTATG
GCACTAACAGAAGAGCATGATGTGATTAGAGATTTCATGGTGGATGATAG
TAATACTGCTGAAGATGGAGAACATTCTGCTTTTATATTACCACCACCTG
GTAGTAGCAGTAGTATTACGAATGCTACTGGATGTTATGAAGAAGATCAG
TTAGTAGGACGACCAGTGATGGCTTTGCAATGGAGCCATCTCCTGCCGGG
ATTATTTCTTGCTGCCTATGCGAAGAGTAGTGGCATGACAGAAGAGGATG
CACCTGGTATGGTTTGTGTATGGGATCGAGATATGCATGCACGTCCAGAG
TTCCGCCTCACTGCGTCTTCTCCAGTGCTAACTGCAGTCTTCCACTCACA
TGAGAAGAATCTAGTCCTGGGTGGGTGTTATAGTGGACAGATACTGCTGT
GGGATACTAGACTGAATAAGACGCTACCTGTGCAGCGCAGTAGCATGTCA
GGTGGACGAAGAGTAGTGGCATGACAGAAGAGGATGCACCTGGTATGGTT
TGTGTATGGGATCGAGATATGCATGCACGTCCAGAGTTCCGCCTCACTGC
GTCTTCTCCAGTGCTAACTGCAGTCTTCCACTCACATGAGAAGAATCTAG
TCCTGGGTGGGTGTTATAGTGGACAGATACTGCTGTGGGATACTAGACTG
AATAAGACGCTACCTGTGCAGCGCAGTAGCATGTCAGGTGGAGGTCACAA
GCATCCTGTGTATGCAATGGCCATGACCTCCTCTGCAGTGGCTGCTGAGC
TGGTCTCTGTCAGTACTGATGGTATGTTGTGTCACTGGGATGCTGCACGC
CTAGCGGATCCTGTCTCGGTTGTGCAGCTGCACATGCCTACACTCAGTAC
CAGTGGAGGGATGAGTCTATCAGGCTTCCTATCTCCTGTTCGCGATGCAG
GTCACAAGCATCCTGTGTATGCAATGGCCATGACCTCCTCTGCAGTGGCT
GCTGAGCTGGTCTCTGTCAGTACTGATGGTATGTTGTGTCACTGGGATGC
TGCACGCCTAGCGGATCCTGTCTCGGTTGTGCAGCTGCACATGCCTACAC
TCAGTACCAGTGGAGGGATGAGTCTATCAGGCTTCCTATCTCCTGTTCGC
GATGCA
back to top