mRNA_D-dudresnayi_contig9764.28565.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9764.28565.1 vs. uniprot
Match: D7FJW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW8_ECTSI) HSP 1 Score: 238 bits (606), Expect = 5.160e-75 Identity = 127/185 (68.65%), Postives = 147/185 (79.46%), Query Frame = 1 Query: 223 VLFIGRQSRPGQPAFGVACQTMSLKLLTGQARLVEALAGMYMKSIDFDAESSAGQRLVVPGAPQAFLPVDRALYAAGMRDGDVVTHVDGLPATQETLAKLGARAHTACDQPCVARVGLTFLRPFGTSQNMPHTSPQSVLDIWRERIRVIVLDSVPESARKQEVLVELERLQDASNLRALTCLTFE 777 +LFI R G+ GV C+TMSL+LLT Q+RLVEALAGMYMKS F A+ G+ L +PGAPQAFLPV+RALYAAGMRDGDVVT VDGLPATQETL LG +AH+ C++PCVA V LTFLRP GTS +P SPQSVLD+WRE +RVIVL+SVPES RK EV++EL RLQDA+ LRAL C FE Sbjct: 1 MLFIPASGRQGR--VGVTCETMSLQLLTAQSRLVEALAGMYMKSTMFRADEGLGE-LSLPGAPQAFLPVERALYAAGMRDGDVVTLVDGLPATQETLGALGDKAHSNCNEPCVASVRLTFLRPCGTS--VPPRSPQSVLDLWREHVRVIVLNSVPESNRKHEVMLELSRLQDATTLRALACQAFE 180
BLAST of mRNA_D-dudresnayi_contig9764.28565.1 vs. uniprot
Match: A0A6H5JPZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPZ0_9PHAE) HSP 1 Score: 237 bits (604), Expect = 9.390e-71 Identity = 130/208 (62.50%), Postives = 150/208 (72.12%), Query Frame = 1 Query: 118 RPNRPTGAALLRLLANGQPHWYVAQEALALETSRTVLFIGRQSRPGQPAFGVACQTMSLKLLTGQARLVEALAGMYMKSIDFDAESSAGQRLVVPGAPQAFLPVDRALYAAGMRDGDVVTHVDGLPATQETLAKLGARAHTAC-----------------DQPCVARVGLTFLRPFGTSQNMPHTSPQSVLDIWRERIRVIVLDSVPE 690 R P+G ALLRLLANGQPHWYV QEAL +T+LFI R G+ GV C+TMSL+LLT Q+RLVEALAGMYMKS F A+ G+ L +PGAPQAFLPV+RALYAAGMRDGDVVT VDGLPATQ+TL LG +AH+ C ++PCVA V LTFLRP GTS +P SPQSVLD+WRE +RVIVL+SVPE Sbjct: 264 RAEEPSGVALLRLLANGQPHWYVGQEALPTGERKTMLFIPASGRQGR--VGVTCETMSLQLLTAQSRLVEALAGMYMKSTMFRADEGLGE-LSLPGAPQAFLPVERALYAAGMRDGDVVTLVDGLPATQDTLGALGDKAHSKCRKLFTAWSPPPPFPSPQNEPCVASVRLTFLRPCGTS--VPPRSPQSVLDLWREHVRVIVLNSVPE 466 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9764.28565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9764.28565.1 >prot_D-dudresnayi_contig9764.28565.1 ID=prot_D-dudresnayi_contig9764.28565.1|Name=mRNA_D-dudresnayi_contig9764.28565.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=335bp ARYAGAPANPVISAVAAAQGGMLVVDQLPQGQGQERQASRPNRPTGAALLback to top mRNA from alignment at D-dudresnayi_contig9764:2561..8547- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9764.28565.1 ID=mRNA_D-dudresnayi_contig9764.28565.1|Name=mRNA_D-dudresnayi_contig9764.28565.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=5987bp|location=Sequence derived from alignment at D-dudresnayi_contig9764:2561..8547- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9764:2561..8547- >mRNA_D-dudresnayi_contig9764.28565.1 ID=mRNA_D-dudresnayi_contig9764.28565.1|Name=mRNA_D-dudresnayi_contig9764.28565.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2010bp|location=Sequence derived from alignment at D-dudresnayi_contig9764:2561..8547- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |