mRNA_D-dudresnayi_contig9762.28559.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9762.28559.1
Unique NamemRNA_D-dudresnayi_contig9762.28559.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9762.28559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9762contigD-dudresnayi_contig9762:1000..1816 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal anchor
Exons2
Model size277
Cds size165
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9762.28559.1prot_D-dudresnayi_contig9762.28559.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9762 1112..1816 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930932.0047753-UTR-D-dudresnayi_contig9762:999..11111622930932.0047753-UTR-D-dudresnayi_contig9762:999..1111Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9762 1000..1111 +
1690557970.0774865-UTR-D-dudresnayi_contig9762:999..11111690557970.0774865-UTR-D-dudresnayi_contig9762:999..1111Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9762 1000..1111 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930932.0334558-CDS-D-dudresnayi_contig9762:1111..11621622930932.0334558-CDS-D-dudresnayi_contig9762:1111..1162Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9762 1112..1162 +
1690557970.0856798-CDS-D-dudresnayi_contig9762:1111..11621690557970.0856798-CDS-D-dudresnayi_contig9762:1111..1162Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9762 1112..1162 +
1622930932.080034-CDS-D-dudresnayi_contig9762:1702..18161622930932.080034-CDS-D-dudresnayi_contig9762:1702..1816Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9762 1703..1816 +
1690557970.0939102-CDS-D-dudresnayi_contig9762:1702..18161690557970.0939102-CDS-D-dudresnayi_contig9762:1702..1816Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9762 1703..1816 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9762.28559.1

>prot_D-dudresnayi_contig9762.28559.1 ID=prot_D-dudresnayi_contig9762.28559.1|Name=mRNA_D-dudresnayi_contig9762.28559.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=55bp
MMMIIILIIIYIFQNLNKIIILILLLIIITILTTLLLIIILILLLIIKII
NKQN*
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mRNA from alignment at D-dudresnayi_contig9762:1000..1816+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9762.28559.1 ID=mRNA_D-dudresnayi_contig9762.28559.1|Name=mRNA_D-dudresnayi_contig9762.28559.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=817bp|location=Sequence derived from alignment at D-dudresnayi_contig9762:1000..1816+ (Desmarestia dudresnayi DdudBR16 monoicous)
CATGAAAATAATCATGAAAATAATAATTTAAATAATACAAATTTAACAAC
AACTAGTATAAATACAGAGAAAAATAACAACAACAATACTACAACTACTA
CTACAAACAATAATGATGATGATAATAATATTGATAATAATATATATATT
TCAAAATCTGAACGTGATAAACAAAGAAAATTAGAAAAAGCAAATCGTAT
TAAAAATGTTGATATTAATTTTGATGCTGCTGCTTCAATAGAAAGAAGTG
CTTTATTAATTAAACCAAAAGATCATATTCCATTTTATCGGAATAAATTA
AATCGTTCTTTAATATCATCATTTAATCATAATAATATAGCAATACAACA
CAAAAATACTAAAGCTGATTTATATGAAGTGGAATTAAAATATTTTCATA
GACCACGTATGATACGTGATCGTGAGAAAAAATGGAATATTATACCAAAA
ATAAATAAATCAAAATTGAAACAATCACTATATAACACTAGTAGTAGTAC
TAATAATACTACTACTAATACTACTAGTAGTAGTAATAGAAATAATATTG
AACAAGATAAACAGAATTTAAATCTTAGTAGTAATAATGCAGATTTTATA
TTAGTAGAGTATATAGAAGAAATACCCCCTGTTATACTGAACTATGGTAT
GGCCTCTGCTATTTTTAATTATTATAGGTATAATAATAAAGAAGACGACG
AAGAAAATAATAATACTAATACTACTACTAATAATAATAACGATACTAAC
AACACTACTACTAATAATAATACTAATACTACTACTAATAATAAAAATAA
TCAACAAACAGAATTAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9762:1000..1816+

>mRNA_D-dudresnayi_contig9762.28559.1 ID=mRNA_D-dudresnayi_contig9762.28559.1|Name=mRNA_D-dudresnayi_contig9762.28559.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=330bp|location=Sequence derived from alignment at D-dudresnayi_contig9762:1000..1816+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGATGATGATAATAATATTGATAATAATATATATATTTCAAAATCTGAA
CATGATGATGATAATAATATTGATAATAATATATATATTTCAAAATCTGA
ACAAAATAATAATACTAATACTACTACTAATAATAATAACGATACTAACA
ACACTACTACTAATAATAATACTAATACTACTACTAATAATAAAAATAAT
CAACAAACAGAATTAAAAAATAATAATACTAATACTACTACTAATAATAA
TAACGATACTAACAACACTACTACTAATAATAATACTAATACTACTACTA
ATAATAAAAATAATCAACAAACAGAATTAA
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