mRNA_D-dudresnayi_contig9761.28558.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9761.28558.1
Unique NamemRNA_D-dudresnayi_contig9761.28558.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9761.28558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9761contigD-dudresnayi_contig9761:1427..4298 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1860
Cds size1854
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9761.28558.1prot_D-dudresnayi_contig9761.28558.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9761 1427..4292 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930931.8536618-CDS-D-dudresnayi_contig9761:1426..17311622930931.8536618-CDS-D-dudresnayi_contig9761:1426..1731Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9761 1427..1731 -
1690557970.0372748-CDS-D-dudresnayi_contig9761:1426..17311690557970.0372748-CDS-D-dudresnayi_contig9761:1426..1731Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9761 1427..1731 -
1622930931.86684-CDS-D-dudresnayi_contig9761:2743..42921622930931.86684-CDS-D-dudresnayi_contig9761:2743..4292Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9761 2744..4292 -
1690557970.0473797-CDS-D-dudresnayi_contig9761:2743..42921690557970.0473797-CDS-D-dudresnayi_contig9761:2743..4292Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9761 2744..4292 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930931.8819382-UTR-D-dudresnayi_contig9761:4292..42981622930931.8819382-UTR-D-dudresnayi_contig9761:4292..4298Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9761 4293..4298 -
1690557970.0590503-UTR-D-dudresnayi_contig9761:4292..42981690557970.0590503-UTR-D-dudresnayi_contig9761:4292..4298Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9761 4293..4298 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9761.28558.1

>prot_D-dudresnayi_contig9761.28558.1 ID=prot_D-dudresnayi_contig9761.28558.1|Name=mRNA_D-dudresnayi_contig9761.28558.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=618bp
MEHNEDGAVQPEGTTPWSMNMLNGVGSRPRMASSEATRQTFTDSTNNMLL
RADVVGGAGQPPLQSPGDSYGPNRHQSVEWRSHHSGVPRKPKLGRGSNHT
NEGRVEVLESECTSLRNRNFLLQKQVERLKVEKGVRDEQMAGFRRKVVEL
DAMLTELRASKGPPVELPAVPMTAPPASVGLLVSDYGGGVFDSYPRLSGA
CTNRAQHATPLTQRLGVAPTAGEVFKGSTQSDIRGEPVLEALSSLGQVTA
PCQVWSGNDVHPGHFPADEGIPPVNATAAREDTPPIVESLPARARLAQGA
GRHEVDSLPFQMPPQSELTPAMAKAIRTRLLTGRRKPVDASLKSTYDRVP
AVGNATCALESDKGCVAGPLGASAVADDAPASEKGVDMVVLDRLSRGHPS
KDFWDDNARSFVIAKGTGVDLVERASAVRTLPRCLQQLATSMPPVPSEQP
VEVAHRSSRAPESRDVAPTAREDVVTKRIEVPFHSSPTKEGTITASRPSQ
KELLPSLSIMDETADEDCNISWCVNSACRGGEEVQPKNERSAGRRNTTPS
QGQSSCAAVVARMGNRPRLRVSRVGTRRRANTPSSETQAVTTTIKAEPTL
PANAASAAPVAGVGNEAS
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mRNA from alignment at D-dudresnayi_contig9761:1427..4298-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9761.28558.1 ID=mRNA_D-dudresnayi_contig9761.28558.1|Name=mRNA_D-dudresnayi_contig9761.28558.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2872bp|location=Sequence derived from alignment at D-dudresnayi_contig9761:1427..4298- (Desmarestia dudresnayi DdudBR16 monoicous)
GTAAATATGGAACATAACGAAGACGGTGCTGTGCAACCCGAGGGCACTAC
CCCGTGGAGCATGAACATGTTGAACGGCGTGGGGTCTCGCCCGAGGATGG
CAAGCTCCGAGGCAACACGTCAAACCTTCACGGACAGTACGAACAACATG
CTGCTTCGGGCTGATGTAGTAGGGGGGGCTGGGCAGCCACCGCTACAAAG
CCCTGGTGATAGCTACGGCCCTAACCGACATCAAAGTGTGGAGTGGCGAA
GTCACCATTCTGGCGTCCCCCGCAAGCCGAAGCTGGGGCGAGGAAGCAAT
CACACAAACGAAGGCCGCGTAGAAGTCCTGGAGTCAGAGTGCACAAGCCT
TCGAAATCGTAACTTTCTTCTCCAGAAGCAGGTGGAACGCTTGAAGGTGG
AAAAGGGCGTTAGGGATGAGCAGATGGCAGGATTTCGCCGCAAGGTTGTT
GAGCTGGATGCAATGTTGACGGAATTGAGGGCGTCAAAAGGGCCACCTGT
CGAACTTCCGGCCGTGCCGATGACAGCTCCTCCTGCGTCGGTAGGACTGC
TTGTATCTGATTACGGTGGAGGCGTCTTTGATAGCTATCCCCGATTGTCG
GGTGCATGTACCAACAGGGCGCAACATGCTACACCTCTTACCCAGCGCCT
GGGTGTTGCTCCAACGGCGGGCGAGGTTTTCAAGGGTTCAACCCAGAGCG
ATATAAGGGGTGAGCCTGTTTTGGAAGCGCTTTCGTCACTTGGGCAGGTG
ACTGCGCCTTGCCAAGTCTGGTCGGGAAACGATGTACATCCTGGGCACTT
TCCTGCCGACGAAGGAATACCTCCTGTCAATGCGACTGCTGCGCGAGAAG
ATACCCCTCCTATCGTGGAGAGTCTCCCAGCGCGGGCAAGACTGGCGCAG
GGGGCTGGAAGGCATGAGGTTGATTCATTGCCGTTCCAAATGCCACCTCA
GTCAGAACTGACGCCGGCCATGGCAAAAGCCATCCGAACAAGGTTGCTCA
CAGGGAGGCGTAAGCCCGTGGATGCCTCACTGAAGAGCACGTATGATCGT
GTCCCAGCTGTCGGAAATGCCACATGTGCTCTTGAATCTGACAAAGGTTG
TGTAGCGGGTCCGCTTGGTGCATCTGCTGTTGCCGACGACGCCCCTGCTA
GCGAAAAAGGCGTTGATATGGTGGTACTGGACCGGTTGTCTCGGGGTCAT
CCCTCGAAAGACTTCTGGGATGACAACGCACGTAGTTTCGTCATTGCGAA
AGGGACTGGCGTGGATTTGGTAGAACGAGCGAGTGCAGTCAGAACGTTAC
CGCGGTGCTTGCAGCAATTGGCGACATCGATGCCTCCTGTGCCGTCCGAG
CAGCCTGTCGAGGTTGCTCATCGTTCTTCTCGGGCCCCCGAATCTCGAGA
CGTTGCTCCGACGGCGCGTGAAGATGTGGTTACGAAGCGTATCGAGGTGC
CGTTTCATTCTTCGCCGACCAAAGAGGGTACAATTACGGCGTCACGGCCG
TCGCAAAAGGAGCTTCTTCCTTCGCTTTCAATCATGGATGAAACGGCGGA
TGAAGGTGAGTCGTGTGTTCCTTATAGCCGTGGTTGGAGATGAACGGCAA
GGGCGTAGCCTTCTCATGTGTTCTTTGTCCGGGGAACTGCAGAGAGTGCA
TCAATGCTACCAGGACTCCTCTCGACGAGCATCGTCAGCAACGGCTACAA
ATAACAGCACGTAACGCATGCACCAACTTTTACATATTAGCCAAAGCGGA
AACGCCTCAAATGCATGTTAAGGTATGGCCCATGACGTTAGCTGTGCCTT
CGTGTCAATGGCCGTGGTAGGCCGTATGAATGCAGCTCTTTGGGTGTATG
CGACGACGTCCACTTTACGTTGGTGTCGATGTGAGTAAATAATCATCGTC
ATAGAGATAGCCTTTGTTGGAACTAACCTTCACAATACCTCAGCGAACGC
TCTCGATTCAGCATGGCGCATGGTTACCCGTGATATATTTCACCTCGTCT
TCTGAACAGAAACCCACTGTCCTCGTGGCTGTACATTCCATGCAGCTGGA
CGGGGTAATGATATAATGTTGCATGTTCAGTGTTTGCTGTACCTGCAGTA
GAACAGTTCGAGCTTGACAAACCTCGAATGCACATTAGACTCGCAAAAAA
TGAGCTAAGAATATAGTGGGCCCAATTTCATCAGTGCAGCCATGTTCTGT
TCATCCTCTTCCATCAGTTGTCTGCCATGTAGCAAAACAATGCTTGACCT
TAAAATAACACTTTTGCACACTTATCGTCGTTGTCGAGCGTAAATTCACC
AGTAATGAAGATGCCAACTCGTTCGTACCATAATACCTTGTTTTCGAAGG
AGATTTCGATTGGCCGTCGCTGTCTCGGAGGCATTCATGATCTTATATGC
CACCAAAGACGAGTTGATTTGGTGAAACGTTGTTATGAATATCTGCAGTA
ATGCATGACCCTACGAATCTCGTGAGTGTAGTGGGTTGAACCGCGAGTGC
ACCATCCTTCCCGTAACATTCTGCCTCCTTTGACCGACGTCCGTTCTTCG
CGTCTGAGGATCGTCAGACTGCAATATATCGTGGTGCGTAAATTCGGCAT
GCCGAGGCGGGGAGGAGGTCCAACCGAAAAATGAAAGATCTGCTGGTAGG
AGAAATACAACACCATCACAAGGGCAGAGTTCATGCGCCGCAGTCGTAGC
TCGTATGGGTAATCGACCGAGACTACGAGTATCTCGAGTAGGCACCCGTA
GGCGAGCAAATACCCCTTCGAGTGAGACTCAAGCTGTAACCACTACCATC
AAGGCGGAGCCAACGCTACCCGCCAATGCAGCGAGCGCTGCGCCCGTGGC
GGGCGTAGGGAACGAAGCATCA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9761:1427..4298-

>mRNA_D-dudresnayi_contig9761.28558.1 ID=mRNA_D-dudresnayi_contig9761.28558.1|Name=mRNA_D-dudresnayi_contig9761.28558.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3708bp|location=Sequence derived from alignment at D-dudresnayi_contig9761:1427..4298- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGAACATAACGAAGACGGTGCTGTGCAACCCGAGGGCACTACCCCGTG
GAGCATGAACATGTTGAACGGCGTGGGGTCTCGCCCGAGGATGGCAAGCT
CCGAGGCAACACGTCAAACCTTCACGGACAGTACGAACAACATGCTGCTT
CGGGCTGATGTAGTAGGGGGGGCTGGGCAGCCACCGCTACAAAGCCCTGG
TGATAGCTACGGCCCTAACCGACATCAAAGTGTGGAGTGGCGAAGTCACC
ATTCTGGCGTCCCCCGCAAGCCGAAGCTGGGGCGAGGAAGCAATCACACA
AACGAAGGCCGCGTAGAAGTCCTGGAGTCAGAGTGCACAAGCCTTCGAAA
TCGTAACTTTCTTCTCCAGAAGCAGGTGGAACGCTTGAAGGTGGAAAAGG
GCGTTAGGGATGAGCAGATGGCAGGATTTCGCCGCAAGGTTGTTGAGCTG
GATGCAATGTTGACGGAATTGAGGGCGTCAAAAGGGCCACCTGTCGAACT
TCCGGCCGTGCCGATGACAGCTCCTCCTGCGTCGGTAGGACTGCTTGTAT
CTGATTACGGTGGAGGCGTCTTTGATAGCTATCCCCGATTGTCGGGTGCA
TGTACCAACAGGGCGCAACATGCTACACCTCTTACCCAGCGCCTGGGTGT
TGCTCCAACGGCGGGCGAGGTTTTCAAGGGTTCAACCCAGAGCGATATAA
GGGGTGAGCCTGTTTTGGAAGCGCTTTCGTCACTTGGGCAGGTGACTGCG
CCTTGCCAAGTCTGGTCGGGAAACGATGTACATCCTGGGCACTTTCCTGC
CGACGAAGGAATACCTCCTGTCAATGCGACTGCTGCGCGAGAAGATACCC
CTCCTATCGTGGAGAGTCTCCCAGCGCGGGCAAGACTGGCGCAGGGGGCT
GGAAGGCATGAGGTTGATTCATTGCCGTTCCAAATGCCACCTCAGTCAGA
ACTGACGCCGGCCATGGCAAAAGCCATCCGAACAAGGTTGCTCACAGGGA
GGCGTAAGCCCGTGGATGCCTCACTGAAGAGCACGTATGATCGTGTCCCA
GCTGTCGGAAATGCCACATGTGCTCTTGAATCTGACAAAGGTTGTGTAGC
GGGTCCGCTTGGTGCATCTGCTGTTGCCGACGACGCCCCTGCTAGCGAAA
AAGGCGTTGATATGGTGGTACTGGACCGGTTGTCTCGGGGTCATCCCTCG
AAAGACTTCTGGGATGACAACGCACGTAGTTTCGTCATTGCGAAAGGGAC
TGGCGTGGATTTGGTAGAACGAGCGAGTGCAGTCAGAACGTTACCGCGGT
GCTTGCAGCAATTGGCGACATCGATGCCTCCTGTGCCGTCCGAGCAGCCT
GTCGAGGTTGCTCATCGTTCTTCTCGGGCCCCCGAATCTCGAGACGTTGC
TCCGACGGCGCGTGAAGATGTGGTTACGAAGCGTATCGAGGTGCCGTTTC
ATTCTTCGCCGACCAAAGAGGGTACAATTACGGCGTCACGGCCGTCGCAA
AAGGAGCTTCTTCCTTCGCTTTCAATCATGGATGAAACGGCGGATGAAGA
TGGAACATAACGAAGACGGTGCTGTGCAACCCGAGGGCACTACCCCGTGG
AGCATGAACATGTTGAACGGCGTGGGGTCTCGCCCGAGGATGGCAAGCTC
CGAGGCAACACGTCAAACCTTCACGGACAGTACGAACAACATGCTGCTTC
GGGCTGATGTAGTAGGGGGGGCTGGGCAGCCACCGCTACAAAGCCCTGGT
GATAGCTACGGCCCTAACCGACATCAAAGTGTGGAGTGGCGAAGTCACCA
TTCTGGCGTCCCCCGCAAGCCGAAGCTGGGGCGAGGAAGCAATCACACAA
ACGAAGGCCGCGTAGAAGTCCTGGAGTCAGAGTGCACAAGCCTTCGAAAT
CGTAACTTTCTTCTCCAGAAGCAGGTGGAACGCTTGAAGGTGGAAAAGGG
CGTTAGGGATGAGCAGATGGCAGGATTTCGCCGCAAGGTTGTTGAGCTGG
ATGCAATGTTGACGGAATTGAGGGCGTCAAAAGGGCCACCTGTCGAACTT
CCGGCCGTGCCGATGACAGCTCCTCCTGCGTCGGTAGGACTGCTTGTATC
TGATTACGGTGGAGGCGTCTTTGATAGCTATCCCCGATTGTCGGGTGCAT
GTACCAACAGGGCGCAACATGCTACACCTCTTACCCAGCGCCTGGGTGTT
GCTCCAACGGCGGGCGAGGTTTTCAAGGGTTCAACCCAGAGCGATATAAG
GGGTGAGCCTGTTTTGGAAGCGCTTTCGTCACTTGGGCAGGTGACTGCGC
CTTGCCAAGTCTGGTCGGGAAACGATGTACATCCTGGGCACTTTCCTGCC
GACGAAGGAATACCTCCTGTCAATGCGACTGCTGCGCGAGAAGATACCCC
TCCTATCGTGGAGAGTCTCCCAGCGCGGGCAAGACTGGCGCAGGGGGCTG
GAAGGCATGAGGTTGATTCATTGCCGTTCCAAATGCCACCTCAGTCAGAA
CTGACGCCGGCCATGGCAAAAGCCATCCGAACAAGGTTGCTCACAGGGAG
GCGTAAGCCCGTGGATGCCTCACTGAAGAGCACGTATGATCGTGTCCCAG
CTGTCGGAAATGCCACATGTGCTCTTGAATCTGACAAAGGTTGTGTAGCG
GGTCCGCTTGGTGCATCTGCTGTTGCCGACGACGCCCCTGCTAGCGAAAA
AGGCGTTGATATGGTGGTACTGGACCGGTTGTCTCGGGGTCATCCCTCGA
AAGACTTCTGGGATGACAACGCACGTAGTTTCGTCATTGCGAAAGGGACT
GGCGTGGATTTGGTAGAACGAGCGAGTGCAGTCAGAACGTTACCGCGGTG
CTTGCAGCAATTGGCGACATCGATGCCTCCTGTGCCGTCCGAGCAGCCTG
TCGAGGTTGCTCATCGTTCTTCTCGGGCCCCCGAATCTCGAGACGTTGCT
CCGACGGCGCGTGAAGATGTGGTTACGAAGCGTATCGAGGTGCCGTTTCA
TTCTTCGCCGACCAAAGAGGGTACAATTACGGCGTCACGGCCGTCGCAAA
AGGAGCTTCTTCCTTCGCTTTCAATCATGGATGAAACGGCGGATGAAGAC
TGCAATATATCGTGGTGCGTAAATTCGGCATGCCGAGGCGGGGAGGAGGT
CCAACCGAAAAATGAAAGATCTGCTGGTAGGAGAAATACAACACCATCAC
AAGGGCAGAGTTCATGCGCCGCAGTCGTAGCTCGTATGGGTAATCGACCG
AGACTACGAGTATCTCGAGTAGGCACCCGTAGGCGAGCAAATACCCCTTC
GAGTGAGACTCAAGCTGTAACCACTACCATCAAGGCGGAGCCAACGCTAC
CCGCCAATGCAGCGAGCGCTGCGCCCGTGGCGGGCGTAGGGAACGAAGCA
TCAACTGCAATATATCGTGGTGCGTAAATTCGGCATGCCGAGGCGGGGAG
GAGGTCCAACCGAAAAATGAAAGATCTGCTGGTAGGAGAAATACAACACC
ATCACAAGGGCAGAGTTCATGCGCCGCAGTCGTAGCTCGTATGGGTAATC
GACCGAGACTACGAGTATCTCGAGTAGGCACCCGTAGGCGAGCAAATACC
CCTTCGAGTGAGACTCAAGCTGTAACCACTACCATCAAGGCGGAGCCAAC
GCTACCCGCCAATGCAGCGAGCGCTGCGCCCGTGGCGGGCGTAGGGAACG
AAGCATCA
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