mRNA_D-dudresnayi_contig9755.28549.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9755.28549.1
Unique NamemRNA_D-dudresnayi_contig9755.28549.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9755.28549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9755contigD-dudresnayi_contig9755:4108..7279 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size775
Cds size774
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9755.28549.1prot_D-dudresnayi_contig9755.28549.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9755 4108..7279 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930931.3365438-CDS-D-dudresnayi_contig9755:4107..43401622930931.3365438-CDS-D-dudresnayi_contig9755:4107..4340Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9755 4108..4340 -
1690557969.8895276-CDS-D-dudresnayi_contig9755:4107..43401690557969.8895276-CDS-D-dudresnayi_contig9755:4107..4340Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9755 4108..4340 -
1622930931.3538108-CDS-D-dudresnayi_contig9755:4501..49051622930931.3538108-CDS-D-dudresnayi_contig9755:4501..4905Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9755 4502..4905 -
1690557969.9001102-CDS-D-dudresnayi_contig9755:4501..49051690557969.9001102-CDS-D-dudresnayi_contig9755:4501..4905Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9755 4502..4905 -
1622930931.3727882-CDS-D-dudresnayi_contig9755:5407..54821622930931.3727882-CDS-D-dudresnayi_contig9755:5407..5482Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9755 5408..5482 -
1690557969.910642-CDS-D-dudresnayi_contig9755:5407..54821690557969.910642-CDS-D-dudresnayi_contig9755:5407..5482Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9755 5408..5482 -
1622930931.3918374-CDS-D-dudresnayi_contig9755:7217..72791622930931.3918374-CDS-D-dudresnayi_contig9755:7217..7279Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9755 7218..7279 -
1690557969.9208038-CDS-D-dudresnayi_contig9755:7217..72791690557969.9208038-CDS-D-dudresnayi_contig9755:7217..7279Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9755 7218..7279 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9755.28549.1

>prot_D-dudresnayi_contig9755.28549.1 ID=prot_D-dudresnayi_contig9755.28549.1|Name=mRNA_D-dudresnayi_contig9755.28549.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=258bp
RSRSRERGSGGDRHERRHRDRDRSGRDKDRDRDRGRDRDDKKDKDRGRDG
ERKRRHYTETPTEDGDKKSKTDHKDSEKEAEKESAQPDAAAADSTTEAAK
DEGGNNGTTSPAAENAASEVVAKGEGEGGDNGTTSPADGNASSEVAVAEG
GERADVPAESEAKKEVDEKDAAAGEDAAKDDGDAAVDGNAATDGNADDRD
DKEGAADRVVEDGEPQDADADTEAPAAVMANDAAEASATMQLDVEEQAEA
NGAVVEGE
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mRNA from alignment at D-dudresnayi_contig9755:4108..7279-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9755.28549.1 ID=mRNA_D-dudresnayi_contig9755.28549.1|Name=mRNA_D-dudresnayi_contig9755.28549.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3172bp|location=Sequence derived from alignment at D-dudresnayi_contig9755:4108..7279- (Desmarestia dudresnayi DdudBR16 monoicous)
CGCAGCCGCAGTCGCGAGCGTGGGTCTGGCGGTGATCGCCACGAGAGGCG
GCACCGTGACAGGTGCGTGAGATATCCGTATGTATATGTGTATATGCGTT
TGCGTAGGGGTCCCGCGTGTTGTAATGGTTATGGAGCGTGATCCATCTTG
GTGGAAGTTCGAGGGTTCGAATGCCGGTACATATGTACGTATTAATGTTA
TCCCCTGTTGGTGGAAATTCGTGAGTTCGAATCCCCCGGTTCGTGGCCTT
TTCTTTCGGGGTTGTCTTTCCGCTCGCGGTAAGCTCGAGAAGGGAGCGAG
TGAGCGCTATTCTGGACGAAAGGCGACGAGCTATTTTTTTTTTTTTTTTC
CCGTCCCTTTTATTATCTTACCGCTATGTTCTTTCTCTAGCTCCATCTCT
CTCGGTAACTCAGATCCGGGGTCACATCGTAGGCGCTCCTCCCACCTTCC
CACTCAGGTGCGTGCCTACATCTTATAGCGAGAACAGTGCGGCACTTCCT
TCCCTCGTCGACTTTCATCGAATTGTGCTTACTCACACTCTCGCGTTTTC
CGCGACGGAAGATGGCACAGAAAAGTGCTTTTGTTGTTTTCACCGAGAAT
CGAACCCCGAACTTCCGCCAACAGAGGCGAACACCCTAACCATTAGACAT
TTGCGACACCCCGTTTATGGGAATGACAAACCCAGTGCGCTGTTTTTTTG
TTTTTTTATTTTTCTCCGTCCCATTTATTATCTTCGCCCTATTCTTTCTC
TAGCTCCATCTCTGTTCGTAAATCAGATCCGGGGTCTCATAGTAGGCACC
TCTCCCGCCTTCCCACTACGGTACGTGCCTACATTTTTATCGCGAGAAGA
GTGCGAGAAGAGTGCAGCACTTTCTTCCCTCGTCGACTTTCGTCGAATTG
TGCTTACTCATGCTCTCGCGTTTTCCGCGACGGAAGATGGCACAGAAAAG
TGCCACCGGGGATCGAACCCCCAACTTCCGCCAACAGAGACGAACACCCT
AACCACTTGACCATTGGGCCACCCCTGCGCTGTGCGCGATAAAAATGACA
CACACATACACACAAGGAAGTACCGGGGAGGGGGAGGGGGGGGGCGGAGG
ATAGACATCATGTTGTCAAGGCTTGCTCACAACGACGCGCTGGGTGAACT
GCTCTTGTGAGCTGAGCTTGGAAAAAGTTGCAGTAGAGTGGACAAGATAC
GATACCCAGGTGTAAAATTAGCGTTGCTAGAGAGACGCAGGCACTAACTG
ACGGGATTTTTTTGGTTTCCCTTCTTGGCCCCTTGATTATGTCGCCTGGT
GTAAGACATAGGGAAGAAGGGAAGACCACCCATACGTGTGCCCGCCAAAG
ATATCGGTTGGCGCCTTGACGGACGGTCAGTCAAGGAGACTCTATACTAA
AACTAGCACATTATCGTCAAGAAAGGCCTTGACGGGTTCATGATTGACCG
TCAACCGACATATTTCCCGCGGCTTGCTCGGAATGCTGATGCTGCTAGTC
GACCAGCTGTTGTAAGCCGAACTGTGGATACTGGAACTGTGGATAAGGTA
ATAGTAGTAAATACCTGGTATGCTGCTGGCCCCGTTGGTTTCTGTCTGAA
GACGTGCTTTTGATTTGATTGAGTAGTTGGTTGATTTATTGGTTGATTGA
GTGAGTGAGTGATTGATTACGGTATTTACGAATTTGGAGGACGACTGTAC
TGTACTTGTGTGGCACATTTTTAGCTTATTGGCGTATCTCAACCATGTTT
ATTCTGTTTTTTTGTTTTTTGGCTTGTGTTTTTTATTTTGTTTTCAGGGA
CAGGAGCGGGCGCGATAAGGACCGCGATCGCGACAGGGGCAGGGACAGAG
ACGACAAGAAGGACAAGGACAGGTTAGCCCCGACTTTAAGTTACACCCTT
GTCTTGTCTTACCGACGGCCTTTCATGTACCGACGGGCGCTTGCGAGGCG
CGTTGCGGAGTTTCCTTCCCTAGCTGACATGCCACCGCTCCACCGTGCCC
GACGTCACCCCTGACTAGCTGTTGTTGTCCTGTTTGTCAACTATTTTATC
TATGGTTGGTGTCAACAATCTCTTTTATGGTTGATAGTCGACCATTACTC
TATTGTTGATGTCAACCGTCATTTTCAACCAGTATTATATTGTTGATGTC
AACCATTGAACCATTGAACTACTCTATGGTTGTCCCGTGCTTACCTTCCT
TCCAGCCGGGTATCACTAGTATTCCACCTTGCTTCGAACTGAATGAAGTT
ACTCTAAGTGAAAGTACGGTCGGCTGGAGTTGTCGAAGAAAAAACGGCGT
GAAAATATTGAAATGTGCTCACCCCCCCCCCCCGCCACACACACACACCC
GCGCGTTTGTTTTTTATTTAACAGGGGCAGGGATGGTGAGCGTAAGCGGC
GTCACTACACGGAGACGCCGACTGAAGACGGTGACAAAAAGTCCAAGACG
GACCACAAGGACAGCGAGAAAGAGGCCGAAAAAGAGTCCGCGCAGCCCGA
CGCTGCCGCTGCTGATTCCACCACGGAGGCCGCAAAGGATGAGGGGGGGA
ACAACGGAACCACGTCCCCTGCTGCCGAAAACGCCGCTAGTGAAGTCGTG
GCGAAGGGCGAGGGTGAGGGAGGGGACAATGGTACCACGTCCCCTGCTGA
TGGAAATGCCTCTAGTGAAGTCGCGGTGGCAGAAGGGGGTGAGAGAGCCG
ATGTCCCCGCGGAAAGCGAGGCTAAGAAAGAGGTTGATGAGAAAGACGCC
GCTGCTGGTGAAGACGCGGCTAAGGACGGTAAGGTGTCTGTCTGCTCAAT
TTGCCTCAAAACAAGAGATATGACGGTGGTTAGTGGTTGCATTATTTTGT
GTTTTTTAACGCTATCGTAAGTAGTAATGGTAATAAAATTAACAACACGC
CGTATCGTCCTCGCGTCATTTTTTTTTTTGGCGGACCAGACGGTGACGCT
GCCGTCGACGGAAACGCTGCTACCGACGGAAACGCTGATGATCGTGATGA
CAAGGAGGGAGCCGCAGACAGGGTCGTCGAGGACGGTGAACCCCAAGATG
CCGATGCTGACACTGAGGCCCCTGCTGCCGTGATGGCCAACGATGCTGCG
GAGGCGTCCGCGACCATGCAGCTGGACGTGGAGGAGCAAGCTGAGGCTAA
CGGTGCCGTCGTTGAGGGAGAG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9755:4108..7279-

>mRNA_D-dudresnayi_contig9755.28549.1 ID=mRNA_D-dudresnayi_contig9755.28549.1|Name=mRNA_D-dudresnayi_contig9755.28549.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1548bp|location=Sequence derived from alignment at D-dudresnayi_contig9755:4108..7279- (Desmarestia dudresnayi DdudBR16 monoicous)
CGCAGCCGCAGTCGCGAGCGTGGGTCTGGCGGTGATCGCCACGAGAGGCG
GCACCGTGACAGCGCAGCCGCAGTCGCGAGCGTGGGTCTGGCGGTGATCG
CCACGAGAGGCGGCACCGTGACAGGGACAGGAGCGGGCGCGATAAGGACC
GCGATCGCGACAGGGGCAGGGACAGAGACGACAAGAAGGACAAGGACAGG
GACAGGAGCGGGCGCGATAAGGACCGCGATCGCGACAGGGGCAGGGACAG
AGACGACAAGAAGGACAAGGACAGGGGCAGGGATGGTGAGCGTAAGCGGC
GTCACTACACGGAGACGCCGACTGAAGACGGTGACAAAAAGTCCAAGACG
GACCACAAGGACAGCGAGAAAGAGGCCGAAAAAGAGTCCGCGCAGCCCGA
CGCTGCCGCTGCTGATTCCACCACGGAGGCCGCAAAGGATGAGGGGGGGA
ACAACGGAACCACGTCCCCTGCTGCCGAAAACGCCGCTAGTGAAGTCGTG
GCGAAGGGCGAGGGTGAGGGAGGGGACAATGGTACCACGTCCCCTGCTGA
TGGAAATGCCTCTAGTGAAGTCGCGGTGGCAGAAGGGGGTGAGAGAGCCG
ATGTCCCCGCGGAAAGCGAGGCTAAGAAAGAGGTTGATGAGAAAGACGCC
GCTGCTGGTGAAGACGCGGCTAAGGACGGGGCAGGGATGGTGAGCGTAAG
CGGCGTCACTACACGGAGACGCCGACTGAAGACGGTGACAAAAAGTCCAA
GACGGACCACAAGGACAGCGAGAAAGAGGCCGAAAAAGAGTCCGCGCAGC
CCGACGCTGCCGCTGCTGATTCCACCACGGAGGCCGCAAAGGATGAGGGG
GGGAACAACGGAACCACGTCCCCTGCTGCCGAAAACGCCGCTAGTGAAGT
CGTGGCGAAGGGCGAGGGTGAGGGAGGGGACAATGGTACCACGTCCCCTG
CTGATGGAAATGCCTCTAGTGAAGTCGCGGTGGCAGAAGGGGGTGAGAGA
GCCGATGTCCCCGCGGAAAGCGAGGCTAAGAAAGAGGTTGATGAGAAAGA
CGCCGCTGCTGGTGAAGACGCGGCTAAGGACGACGGTGACGCTGCCGTCG
ACGGAAACGCTGCTACCGACGGAAACGCTGATGATCGTGATGACAAGGAG
GGAGCCGCAGACAGGGTCGTCGAGGACGGTGAACCCCAAGATGCCGATGC
TGACACTGAGGCCCCTGCTGCCGTGATGGCCAACGATGCTGCGGAGGCGT
CCGCGACCATGCAGCTGGACGTGGAGGAGCAAGCTGAGGCTAACGGTGCC
GTCGTTGAGGGAGAGACGGTGACGCTGCCGTCGACGGAAACGCTGCTACC
GACGGAAACGCTGATGATCGTGATGACAAGGAGGGAGCCGCAGACAGGGT
CGTCGAGGACGGTGAACCCCAAGATGCCGATGCTGACACTGAGGCCCCTG
CTGCCGTGATGGCCAACGATGCTGCGGAGGCGTCCGCGACCATGCAGCTG
GACGTGGAGGAGCAAGCTGAGGCTAACGGTGCCGTCGTTGAGGGAGAG
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