mRNA_D-dudresnayi_contig9753.28546.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9753.28546.1
Unique NamemRNA_D-dudresnayi_contig9753.28546.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9753.28546.1 vs. uniprot
Match: A0A7S3HST0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HST0_9STRA)

HSP 1 Score: 247 bits (631), Expect = 1.040e-79
Identity = 124/180 (68.89%), Postives = 149/180 (82.78%), Query Frame = 1
Query:    1 MSEYWVSQAKFYCKVCNCYIADNKPSRQHHENGVKHKQKVEEMQKQKRMDKLHGARSEAELKQQLADIEKAAKEAIASDRSQHDGLFYQNSSVKARAPPPPAPRPPGFPQPFKQTEDDVEQ---EEDEGDGVYTVKGQTYLQGKLHEQLIRSGMTAEIFVESLDEWFSGTISARVETAVP 531
            MSEYWVSQAK YCKVCNCYIADNK SR HHENG KHK+KVE + KQKR +KLHGARSE ELK QLA+IEKAAKEAIA+DR++ DG F+QNS V++R PPPPAPRPPGF +P +  +D  ++   E+D+G G+YTVKGQTYLQGK+HE+ IR+GM  EIFVE+ DEW+SG I AR +T +P
Sbjct:    1 MSEYWVSQAKHYCKVCNCYIADNKASRAHHENGAKHKEKVEILNKQKRDEKLHGARSEMELKHQLAEIEKAAKEAIATDRAEQDGFFFQNSGVRSRPPPPPAPRPPGFAKPNQAGDDGADEDALEDDDGSGMYTVKGQTYLQGKIHEEKIRTGMECEIFVEADDEWYSGRIDARHDTPIP 180          
BLAST of mRNA_D-dudresnayi_contig9753.28546.1 vs. uniprot
Match: G4ZBQ7_PHYSP (Matrin-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZBQ7_PHYSP)

HSP 1 Score: 144 bits (363), Expect = 2.980e-37
Identity = 98/295 (33.22%), Postives = 143/295 (48.47%), Query Frame = 1
Query:    1 MSEYWVSQAKFYCKVCNCYIADNKPSRQHHENGVKHKQKVEEMQKQKRMDKLHGARSEAELKQQLADIEKAAKEAIASDRSQHDGLFYQNSSVKARAPPPPAPRPPGFPQ------------------PFKQTEDDVEQEEDEGDGVYTVKGQTYLQGKLHEQLIRSGMTAEIFVESLDEWFSGTISARVETAVPHTSLVLVSFDVAYTVPAQEQQGDSSGEAQTVVEKGIKSDRIRLLAQADGTLPEDNLGTAPTRPA--AAVVNENTALYIVPCTGIGMWQTVAVREVDEEAE 825
            M +YWVS+ + YCK CN ++  +K S +HHE G +HK+KVEE  K KR  K   + ++ EL+ QL  IE+AA+     D             +  RAPPPP PR PG P                   P  Q ++  E+  ++  GVY V+G  YL+GK HE  + +G   +I+VE  ++W    +       VP+T L    F V Y +P  E    +  + + V E  + +DR+R+   A+ TL          R    AA V  +  + I   TG+G W TV VR++DE  E
Sbjct:    1 MVDYWVSRERHYCKYCNVWMQSDKLSIKHHEQGRRHKEKVEETFKAKRQTKSDASSAQKELRDQLQQIEEAAQAKYEQD-------------MAGRAPPPP-PRRPGQPNAXXXXXXXXXXSGGQYRPPAMQEKEPQEEXXEDDKGVYAVRGVVYLEGKKHETQLETGSACQIWVEEAEQWIDALVERATVHTVPNTELSFRRFTVMYMLPPSEDAEKNEDKPKPVTEHEVLADRLRIPLPANVTLEAAEKMVDQWRNGGDAAGVETHAPVVIDETTGMGEWSTVEVRQIDESPE 281          
BLAST of mRNA_D-dudresnayi_contig9753.28546.1 vs. uniprot
Match: D0MUG9_PHYIT (Matrin-type domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MUG9_PHYIT)

HSP 1 Score: 142 bits (357), Expect = 2.210e-36
Identity = 94/287 (32.75%), Postives = 145/287 (50.52%), Query Frame = 1
Query:    1 MSEYWVSQAKFYCKVCNCYIADNKPSRQHHENGVKHKQKVEEMQKQKRMDKLHGARSEAELKQQLADIEKAAKEAIASDRSQHDGLFYQNSSVKARAPPPPAP----------RPPGFPQPFKQTEDDVEQEEDEGDGVYTVKGQTYLQGKLHEQLIRSGMTAEIFVESLDEWFSGTISARVETAVPHTSLVLVSFDVAYTVPAQEQQGDSSGEAQTVVEKGIKSDRIRLLAQADGTLP--EDNLGTAPTRPAAAVVNENTALYIVPCTGIGMWQTVAVREVDEEAE 825
            M +YWVS+ + YCK CN ++  ++ S +HHE G +HK+KV+E  KQKR  K     S+ EL+ QL  IE+AA+   A D +            ++ AP               RPP       Q E++ E EED+  GVY V+G  YL+GK HE  + +G   +I+VE  ++W    +       VP+T +    F V Y +P  E+   +  +A+ + E  + +DR+R+   A+ TL   E+ +        A   N   ++ I   TG+G+W TV VR++DE  E
Sbjct:    1 MVDYWVSKERHYCKYCNVWMQSDRVSIKHHEQGRRHKEKVDETLKQKRKAKSDANNSQRELQDQLKQIEEAAQAKYAQDMATRRAPPXXXRPGQSNAPXXXXXXXGQSAGRQFRPP------VQLEEEPEDEEDDN-GVYAVRGVVYLEGKKHESQLETGSACQIWVEEAEQWVDALVEQATVHTVPNTEVSFRRFTVMYMLPPSEEAMKNGEKAEPMTENEVLADRLRIPLPANVTLEAAEEMVEQWRNGDDATQTNTKPSVIIDETTGMGVWSTVEVRQIDESPE 280          
BLAST of mRNA_D-dudresnayi_contig9753.28546.1 vs. uniprot
Match: A0A2P4XVK7_9STRA (WW domain-binding protein 4 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XVK7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 4.710e-34
Identity = 98/310 (31.61%), Postives = 148/310 (47.74%), Query Frame = 1
Query:    1 MSEYWVSQAKFYCKVCNCYIADNKPSRQHHENGVKHKQKVEEMQKQKRMDKLHGARSEAELKQQLADIEKAAKEAIASDRSQHDGLFYQNSSVKARAPPPPAPR-----------------------------------PPGFPQPFKQTEDDVEQEEDEGDGVYTVKGQTYLQGKLHEQLIRSGMTAEIFVESLDEWFSGTISARVETAVPHTSLVLVSFDVAYTVPAQEQQGDSSGEAQTVVEKGIKSDRIRLLAQADGTLPEDNLGTAPTRPAAAVVNENTALYIVPCTGIGMWQTVAVREVDEEAE 825
            M++YWVS+ + YCK CN ++  +K S +HHE G KHK KV+E  K+KR  K   + SE EL+ QL +IE AA+   A D ++             RAPPPP PR                                   P G  +P    E++ E++ED+  GVY V+G  YL+GK HE  + +G   +I+VE  ++W    +       VP+T      F V Y +P  E+   S  + + + E+ + +DR+R+    + TL          R       E +++ I   TG+G+W TV VR++DE  E
Sbjct:    1 MADYWVSRERHYCKYCNVWMQSDKLSIKHHEQGRKHKDKVDETLKRKRKAKTDASNSEKELQDQLKEIEAAAQAKYAQDMAR-------------RAPPPP-PRSGXXXXXXXXXXXXXXXSRTAQSNGNTAVALSGRQPVGVYRPPIVQEEEPEEDEDDH-GVYAVRGVVYLEGKKHESQLETGSACQIWVEEAEQWIDALVEQATVHTVPNTDRSFRRFTVMYMLPLSEEAVKSGEKPKPMTEREVLADRLRIPLPDNVTLEAAEKMVEQWRNGGNT--ERSSVLIDETTGMGVWSTVEVRQIDESPE 293          
BLAST of mRNA_D-dudresnayi_contig9753.28546.1 vs. uniprot
Match: W2RK05_PHYPN (Matrin-type domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2RK05_PHYPN)

HSP 1 Score: 135 bits (341), Expect = 1.020e-33
Identity = 99/319 (31.03%), Postives = 147/319 (46.08%), Query Frame = 1
Query:    1 MSEYWVSQAKFYCKVCNCYIADNKPSRQHHENGVKHKQKVEEMQKQKRMDKLHGARSEAELKQQLADIEKAAKEAIASDRSQHDGLFYQNSSVKARAPPPPAPRP------------PG------------------------------FPQPFKQTEDDVEQEEDEGDGVYTVKGQTYLQGKLHEQLIRSGMTAEIFVESLDEWFSGTISARVETAVPHTSLVLVSFDVAYTVPAQEQQGDSSGEAQTVVEKGIKSDRIRLLAQADGTLPEDNLGTAPTRPAAAVVNENT--ALYIVPCTGIGMWQTVAVREVDEEAE 825
            M +YWVS+ + YCK CN ++ ++K S +HHE G +HK+KVEE  K KR  K     S+ EL  QL  IE+AA+   A D +              RAPPPP PRP            PG                              +  P    E + + E+D+G  VY V+G  YL+GK HE  + +G   +I+VE  ++W    +       VP+T L    F V Y +P  E+   +  + + + E  +++DR+R+   A+ TL          R      + N+  ++ I   TG+GMW TV VR++DE  E
Sbjct:    1 MVDYWVSKERHYCKYCNAWMQNDKMSIKHHEQGRRHKEKVEETLKHKRKAKSEANNSQKELNDQLKQIEEAAQAKYAQDMANR------------RAPPPP-PRPGHSNAPXXXXXRPGQSSASAXXXXXXXXXXXXXXXXXXXXSSGQYRPPIIPEEPEEKDEDDKG--VYAVRGVVYLEGKKHESQLETGSACQIWVEEAEKWVDALVEQATVHTVPNTELSFRRFKVMYMLPPSEEAAKNGEKPKPMTEHEVRADRLRIPLPANVTLEAAEKMVDQWRNDGDATDRNSKPSVLIDETTGMGMWSTVEVRQIDESPE 304          
BLAST of mRNA_D-dudresnayi_contig9753.28546.1 vs. uniprot
Match: M4BW33_HYAAE (Matrin-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BW33_HYAAE)

HSP 1 Score: 131 bits (330), Expect = 4.630e-32
Identity = 95/314 (30.25%), Postives = 148/314 (47.13%), Query Frame = 1
Query:    1 MSEYWVSQAKFYCKVCNCYIADNKPSRQHHENGVKHKQKVEEMQKQKRMDKLHGARSEAELKQQLADIEKAAKEAIASDRSQHDGLFYQNSSVKARAPPPPAPRPPGFP-----------------------QPFKQT---------------EDDVEQEEDEGDGVYTVKGQTYLQGKLHEQLIRSGMTAEIFVESLDEWFSGTISARVETAVPHTSLVLVSFDVAYTVPAQEQQGDSSGEAQTVVEKGIKSDRIRLLAQADGTLPE-DNLGTAPTRPAAAVVNENTALYIVPCTGIGMWQTVAVREVDEEAE 825
            M +YWVS+ +  CK CN ++  +K S +HHE G KHK+KVEE+ K  R  K     ++ E++ QL  IE+AA      D  + +     + S +  APPPP  RP                           QP+ +                E+ VE+++D+G  VY VKG  YL+GK HE  + +G   +I+VE  ++W    +       +P+T L    F +AY  P+ ++   +  + + V E  + +DR+R+L  A+ TL   + +        AA     T + I   TG+G W TV VR++DE  E
Sbjct:    1 MVDYWVSRERHCCKYCNVWMPSDKTSIKHHEQGRKHKEKVEEVLKLNRRIKSDTKNAQKEIQNQLQQIEEAAHAKFEQDLVRCNTKAQVSISGETVAPPPPPRRPTQIQAVFCSVGHRNEGDAVSVARLEHRQPWAREALNRSNLNENEEVNEEEGVEEQDDKG--VYAVKGIVYLEGKNHETQLDTGSACQIWVEEQEQWLDALVEQATVHTIPNTELSFRRFTIAYMSPSSQECAKNKDKRKPVTEHNVLADRLRILLPANVTLEAAEKMVERWRNHGAAESPTRTPVVIDETTGMGEWNTVEVRQIDESLE 312          
BLAST of mRNA_D-dudresnayi_contig9753.28546.1 vs. uniprot
Match: A0A329SWQ2_9STRA (Matrin-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SWQ2_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.660e-31
Identity = 102/323 (31.58%), Postives = 147/323 (45.51%), Query Frame = 1
Query:    1 MSEYWVSQAKFYCKVCNCYIADNKPSRQHHENGVKHKQKVEEMQKQKRMDKLHGARSEAELKQQLADIEKAAKEAIASDRSQHDGLFYQNSSVKARAPPPPAPRP------------PG--------------------------FPQPFK--------QTEDDVEQEEDEGDGVYTVKGQTYLQGKLHEQLIRSGMTAEIFVESLDEWFSGTISARVETAVPHTSLVLVSFDVAYTVPAQEQQGDSSGEAQTVVEKGIKSDRIRLLAQADGTLPEDNLGTAPTRPA--AAVVNENTALYIVPCTGIGMWQTVAVREVDEEAE 825
            M +YWVS+ + YCK CN ++ ++K S +HHE G +HK+KVEE  K KR  K     S+ EL  QL +IE+AA+   A D +              RAPPPP PRP            PG                            QP +        + E + E EED+  GVY V+G  YL+GK HE  + +G   +I+VE  ++W    +       VP+T L    F V Y +P  E+      + + + E+ + +DR+R+   A+ TL          R    AA  N   ++ I   TG+G W  V VR++DE  E
Sbjct:    1 MVDYWVSKERHYCKYCNAWMQNDKMSIKHHEQGRRHKEKVEETLKLKRQAKSDANNSQKELHDQLKEIEEAAQAKYAQDMANR------------RAPPPP-PRPGQRNAXXXXXRRPGQCSRNXXXXXXXQGQSSGIAAAAXXXXRQPSRGGQYRPPVELEKEPEDEEDDK-GVYAVRGVVYLEGKKHETQLETGSACQIWVEEAEQWIDALVELATVHTVPNTELSFRRFTVMYMLPPSEEALKEGEKPKPMTEREVLADRLRVPLPANVTLEAAEKMVDQWRNGGDAAESNAKPSVIIDETTGMGAWSIVEVRQIDESPE 309          
BLAST of mRNA_D-dudresnayi_contig9753.28546.1 vs. uniprot
Match: A0A3M6VJN6_9STRA (Matrin-type domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJN6_9STRA)

HSP 1 Score: 126 bits (317), Expect = 3.230e-30
Identity = 96/308 (31.17%), Postives = 148/308 (48.05%), Query Frame = 1
Query:    1 MSEYWVSQAKFYCKVCNCYIADNKPSRQHHENGVKHKQKVEEMQKQKRMDKLHGARSEAELKQQLADIEKAAK---EAIASDRSQHDGLFY----QNSS--------------------VKARAPPPPAPRPPGFPQ----PFKQTEDDVEQEEDEGDGVYTVKGQTYLQGKLHEQLIRSGMTAEIFVESLDEWFSGTISARVETAVPHTSLVLVSFDVAYTVPAQEQQGDSSGEAQTVVEKGIKSDRIRLLAQADGTLP--EDNLGTAPTRPAAAVVNENTALYIVPCTGIGMWQTVAVREVDEEAE 825
            M +YWVS+ + YCK CN ++ ++K S +HHE+G +HK+KVEE  K KR  KL   RS+ EL  QL  IE+ A    E   ++RS+          QN++                    +  +A    +     F      P    E + E++  E +GVY+V+G  YL+GK HE  + SG   +I+VE +++W    +       VP+T L    F V Y +P  E+   +  +A+ + E+ + +DR+R+    + TL   E  +    T   A V      + I   TG+G W TV VR +DE  E
Sbjct:    1 MVDYWVSRERHYCKYCNVWMQNDKLSIKHHEHGRRHKEKVEETLKLKRQTKLDAERSQKELCDQLQQIEEEAHAKHEQDMANRSRRPXXXXXRPGQNNAXXXXXXXXXXIHATPHYIGQISGKASLVHSTTRKSFTDAPYCPVIDHEKEEEEKRKEDNGVYSVRGVVYLEGKKHETQLESGSACQIWVEEVEQWLDALVEQATVHTVPNTDLAFRRFTVMYMLPPSEEGLTNGDKAKPITERDVLADRLRIPLPTNVTLETAEKMVNQWRTGETAEVATW-APVVIDETTGMGEWSTVEVRHIDESEE 307          
BLAST of mRNA_D-dudresnayi_contig9753.28546.1 vs. uniprot
Match: A0A662WP53_9STRA (U1-type domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WP53_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.530e-28
Identity = 94/310 (30.32%), Postives = 139/310 (44.84%), Query Frame = 1
Query:    1 MSEYWVSQAKFYCKVCNCYIADNKPSRQHHENGVKHKQKVEEMQKQKRMDKLHGARSEAELKQQLADIEKAAKEAIASDRSQHDGLFYQNSSVKARAPPPPAP----------RPPGFPQPF----------------------KQTEDDVEQEEDEGDGVYTVKGQTYLQGKLHEQLIRSGMTAEIFVESLDEWFSGTISARVETAVPHTSLVLVSFDVAYTVPAQEQQGDSSGEAQTVVEKGIKSDRIRLLAQADGTLPEDNLGTAPTRPAAAVVNE---NTALYIVPCTGIGMWQTVAVREVDEEAE 825
            M +YWVS+ + +CK CN ++  +K        G KHK+KVEE  K KR  K    RS+ EL++QL +IE+AA+   A D               AR PPPP            R PG                           ++ +++ E+EE++G+GVY V+G  YL+GK HE  + +G   +I+VE ++EW    +       +P+T L    F V Y +P      +     + V E  + +DR+R+   A  TL               V  E   +  + I   TG+G W TV VR+VDE  E
Sbjct:    1 MVDYWVSKERHFCKYCNVWMQGDKLQ------GKKHKEKVEETFKMKRQVKSDAVRSQKELQEQLQEIEEAAQARFAQDVV----------GRSARPPPPPRSXXXXXXXXXXRRPGHXXXXXXXXXXXXXXXPAGQDSGGRHCRELQEEPEEEEEDGNGVYAVRGVVYLEGKKHETQLETGSACQIWVEEVEEWLDALLEQTTVHTIPNTELSFRRFTVMYMLPPSADTPEEK--PKPVTEHEVLADRLRIQMPAGMTLEAAEKMVEQWHSGGEVEAEMEVSVPVVIDETTGMGEWSTVEVRQVDESEE 292          
BLAST of mRNA_D-dudresnayi_contig9753.28546.1 vs. uniprot
Match: A0A4D9CZ19_9STRA (U1-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ19_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.040e-27
Identity = 108/326 (33.13%), Postives = 146/326 (44.79%), Query Frame = 1
Query:    1 MSEYWVSQAKFYCKVCNCYIADNKPSRQHHENGVKHKQKVEEMQKQKRMDKLHGARSEAELKQQLADIEKAAKEAIASDRSQHDGLFYQNSSVKARAPPPPAPRPPGFP--------------------QPFKQTED-----DVEQEEDEG----------------DGVYTVKGQTYLQGKLHEQLIRSGMTAEIFVESLDEWFSGTISARVETAVPHTSLVLVSFDVAYTVPAQEQQGDSSGEAQTVV----------EKGIKSDRIRLLAQADGTLPEDNLGTAPTRPAAAVVNENTALYIVPCTGIGMWQTVAVREVDEEAE 825
            M++YW S  K  CK CN ++ DNK SR+ HE G +HKQ VEE  K +R  K  G+  + EL ++L +IEKAA+     D +         ++V+         RPP F                      P +   D     DVE+EE E                 +G YTV G TYL+GK  E  +  G   +++VE  D W    +S    TAVP+TSL L  F V      +   G  + E Q  V          E+G+ SDRIRL+   +G      + T P       V+E+T        G+G WQTV+VR VDEEAE
Sbjct:    1 MADYWKSTPKHCCKFCNVWMDDNKTSRRLHEGGARHKQAVEEFFKAQREAKRQGSIGDGELSKELREIEKAAQAQAEKDAAMFKTSVV--TTVEXXXXXXXXXRPPTFSLSSRXXXXXXXXGVRHPXXXXPHRVRGDVGGWRDVEKEEKEVNGGSEDVTGGSAAAEVEGRYTVDGVTYLEGKAVETRLVRGTPCQVWVEKDDAWREAIVSRVEVTAVPNTSLTLRKFSVILGA-RRPDGGKEAKEGQAAVTQREEEAKEVEEGVLSDRIRLV---EGEHSMGGVDTLPPXXXXXXVDEDT--------GLGGWQTVSVRMVDEEAE 312          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9753.28546.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3HST0_9STRA1.040e-7968.89Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
G4ZBQ7_PHYSP2.980e-3733.22Matrin-type domain-containing protein n=4 Tax=Phyt... [more]
D0MUG9_PHYIT2.210e-3632.75Matrin-type domain-containing protein n=2 Tax=Phyt... [more]
A0A2P4XVK7_9STRA4.710e-3431.61WW domain-binding protein 4 n=1 Tax=Phytophthora p... [more]
W2RK05_PHYPN1.020e-3331.03Matrin-type domain-containing protein n=8 Tax=Phyt... [more]
M4BW33_HYAAE4.630e-3230.25Matrin-type domain-containing protein n=1 Tax=Hyal... [more]
A0A329SWQ2_9STRA1.660e-3131.58Matrin-type domain-containing protein n=2 Tax=Phyt... [more]
A0A3M6VJN6_9STRA3.230e-3031.17Matrin-type domain-containing protein n=2 Tax=Pero... [more]
A0A662WP53_9STRA1.530e-2830.32U1-type domain-containing protein n=2 Tax=Nothophy... [more]
A0A4D9CZ19_9STRA2.040e-2733.13U1-type domain-containing protein n=2 Tax=Monodops... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9753contigD-dudresnayi_contig9753:7914..9043 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score145.6
Seed ortholog evalue3.4e-32
Seed eggNOG ortholog4787.PITG_01944T0
KEGG rclassRC00001
KEGG koko:K00354,ko:K13220,ko:K21768
KEGG ReactionR00282
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003725,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009791,GO:0009845,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015030,GO:0016070,GO:0016071,GO:0016458,GO:0016604,GO:0019222,GO:0031047,GO:0031974,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044728,GO:0045292,GO:0046483,GO:0048519,GO:0048856,GO:0050789,GO:0060255,GO:0065007,GO:0070013,GO:0071005,GO:0071011,GO:0071704,GO:0080188,GO:0090304,GO:0090351,GO:0097159,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.U1 zinc finger
EggNOG OGs3QBZQ@4776,KOG0150@1,KOG0150@2759
EC1.6.99.1
COG Functional cat.A
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03041,ko04812
Hectar predicted targeting categoryother localisation
Exons5
Model size825
Cds size825
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9753.28546.1prot_D-dudresnayi_contig9753.28546.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9753 7914..9043 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930930.8734574-CDS-D-dudresnayi_contig9753:7913..81801622930930.8734574-CDS-D-dudresnayi_contig9753:7913..8180Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9753 7914..8180 +
1690557969.7395961-CDS-D-dudresnayi_contig9753:7913..81801690557969.7395961-CDS-D-dudresnayi_contig9753:7913..8180Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9753 7914..8180 +
1622930930.893068-CDS-D-dudresnayi_contig9753:8252..83621622930930.893068-CDS-D-dudresnayi_contig9753:8252..8362Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9753 8253..8362 +
1690557969.7542481-CDS-D-dudresnayi_contig9753:8252..83621690557969.7542481-CDS-D-dudresnayi_contig9753:8252..8362Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9753 8253..8362 +
1622930930.9143364-CDS-D-dudresnayi_contig9753:8471..85681622930930.9143364-CDS-D-dudresnayi_contig9753:8471..8568Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9753 8472..8568 +
1690557969.763715-CDS-D-dudresnayi_contig9753:8471..85681690557969.763715-CDS-D-dudresnayi_contig9753:8471..8568Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9753 8472..8568 +
1622930931.0319712-CDS-D-dudresnayi_contig9753:8650..89241622930931.0319712-CDS-D-dudresnayi_contig9753:8650..8924Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9753 8651..8924 +
1690557969.7740672-CDS-D-dudresnayi_contig9753:8650..89241690557969.7740672-CDS-D-dudresnayi_contig9753:8650..8924Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9753 8651..8924 +
1622930931.0531442-CDS-D-dudresnayi_contig9753:8966..90431622930931.0531442-CDS-D-dudresnayi_contig9753:8966..9043Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9753 8967..9043 +
1690557969.7845192-CDS-D-dudresnayi_contig9753:8966..90431690557969.7845192-CDS-D-dudresnayi_contig9753:8966..9043Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9753 8967..9043 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9753.28546.1

>prot_D-dudresnayi_contig9753.28546.1 ID=prot_D-dudresnayi_contig9753.28546.1|Name=mRNA_D-dudresnayi_contig9753.28546.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=275bp
MSEYWVSQAKFYCKVCNCYIADNKPSRQHHENGVKHKQKVEEMQKQKRMD
KLHGARSEAELKQQLADIEKAAKEAIASDRSQHDGLFYQNSSVKARAPPP
PAPRPPGFPQPFKQTEDDVEQEEDEGDGVYTVKGQTYLQGKLHEQLIRSG
MTAEIFVESLDEWFSGTISARVETAVPHTSLVLVSFDVAYTVPAQEQQGD
SSGEAQTVVEKGIKSDRIRLLAQADGTLPEDNLGTAPTRPAAAVVNENTA
LYIVPCTGIGMWQTVAVREVDEEAE
back to top

mRNA from alignment at D-dudresnayi_contig9753:7914..9043+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9753.28546.1 ID=mRNA_D-dudresnayi_contig9753.28546.1|Name=mRNA_D-dudresnayi_contig9753.28546.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1130bp|location=Sequence derived from alignment at D-dudresnayi_contig9753:7914..9043+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTCTGAGTATTGGGTTAGCCAAGCCAAGTTCTATTGTAAAGTATGCAA CTGTTATATTGCTGATAACAAACCTAGTCGACAGCACCATGAGAATGGTG TTAAACACAAGCAAAAAGTCGAGGAGATGCAGAAGCAGAAGAGGATGGAC AAGCTGCATGGTGCTAGATCTGAAGCTGAGCTTAAGCAACAACTAGCTGA CATTGAAAAGGCTGCCAAGGAAGCCATTGCATCAGATAGATCTCAGCATG ATGGTTTATTTTACCAGGTAGGCAATCACACATTCATATGTTAATTATAC CGGTACAGTATGCATAAATAGGTTGATGTAATTATATAGAATTCAAGCGT GAAAGCTAGAGCTCCACCCCCGCCGGCACCACGGCCACCTGGATTCCCTC AACCTTTCAAGCAAACGGAAGATGACGTGGAGCAGGAAGAGGACGAGGGG TGAGTCTCACTACGATATGCATAGAGCTGCTACAATCGATAGTACACTAA CTTGGCAGTATAACTGTTGTATTTAATATTCACTTAACTTCGGTTCTGGT GCATATAGGGACGGCGTGTACACGGTGAAGGGGCAGACGTACCTGCAGGG GAAGCTCCACGAGCAGCTCATCCGCTCCGGCATGACCGCCGAGATATTTG TTGAGGTACGGTACGGGGTATTCATAGGGGTTGAAGTAGTTTGCAGTGAA TAGTAATGCTGTTGTTGCCTGTGCATTAAATGTTTAGTCGCTGGACGAGT GGTTTTCTGGTACAATCAGCGCTAGAGTGGAGACAGCGGTGCCACACACG AGTCTCGTGCTGGTGAGCTTCGACGTCGCCTATACCGTACCTGCGCAGGA GCAGCAGGGGGACAGCAGTGGGGAGGCCCAGACAGTGGTGGAGAAGGGCA TCAAGAGCGACCGCATTCGGTTGCTGGCCCAAGCAGACGGCACTCTGCCG GAAGACAACCTGGGCACAGCACCGACTAGGCCTGCTGCTGCGGTCGTTAA CGAAAACACAGGTGAGAGCTTCATGCACTGAACTGTTCTGTTTTTTGGCT CAGCACTCTATATTGTGCCGTGTACAGGGATCGGTATGTGGCAGACGGTG GCGGTGCGCGAGGTGGACGAGGAGGCGGAA
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig9753:7914..9043+

>mRNA_D-dudresnayi_contig9753.28546.1 ID=mRNA_D-dudresnayi_contig9753.28546.1|Name=mRNA_D-dudresnayi_contig9753.28546.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at D-dudresnayi_contig9753:7914..9043+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTCTGAGTATTGGGTTAGCCAAGCCAAGTTCTATTGTAAAGTATGCAA
CTGTTATATTGCTGATAACAAACCTAGTCGACAGCACCATGAGAATGGTG
TTAAACACAAGCAAAAAGTCGAGGAGATGCAGAAGCAGAAGAGGATGGAC
AAGCTGCATGGTGCTAGATCTGAAGCTGAGCTTAAGCAACAACTAGCTGA
CATTGAAAAGGCTGCCAAGGAAGCCATTGCATCAGATAGATCTCAGCATG
ATGGTTTATTTTACCAGATGTCTGAGTATTGGGTTAGCCAAGCCAAGTTC
TATTGTAAAGTATGCAACTGTTATATTGCTGATAACAAACCTAGTCGACA
GCACCATGAGAATGGTGTTAAACACAAGCAAAAAGTCGAGGAGATGCAGA
AGCAGAAGAGGATGGACAAGCTGCATGGTGCTAGATCTGAAGCTGAGCTT
AAGCAACAACTAGCTGACATTGAAAAGGCTGCCAAGGAAGCCATTGCATC
AGATAGATCTCAGCATGATGGTTTATTTTACCAGAATTCAAGCGTGAAAG
CTAGAGCTCCACCCCCGCCGGCACCACGGCCACCTGGATTCCCTCAACCT
TTCAAGCAAACGGAAGATGACGTGGAGCAGGAAGAGGACGAGGGAATTCA
AGCGTGAAAGCTAGAGCTCCACCCCCGCCGGCACCACGGCCACCTGGATT
CCCTCAACCTTTCAAGCAAACGGAAGATGACGTGGAGCAGGAAGAGGACG
AGGGGGACGGCGTGTACACGGTGAAGGGGCAGACGTACCTGCAGGGGAAG
CTCCACGAGCAGCTCATCCGCTCCGGCATGACCGCCGAGATATTTGTTGA
GGGACGGCGTGTACACGGTGAAGGGGCAGACGTACCTGCAGGGGAAGCTC
CACGAGCAGCTCATCCGCTCCGGCATGACCGCCGAGATATTTGTTGAGTC
GCTGGACGAGTGGTTTTCTGGTACAATCAGCGCTAGAGTGGAGACAGCGG
TGCCACACACGAGTCTCGTGCTGGTGAGCTTCGACGTCGCCTATACCGTA
CCTGCGCAGGAGCAGCAGGGGGACAGCAGTGGGGAGGCCCAGACAGTGGT
GGAGAAGGGCATCAAGAGCGACCGCATTCGGTTGCTGGCCCAAGCAGACG
GCACTCTGCCGGAAGACAACCTGGGCACAGCACCGACTAGGCCTGCTGCT
GCGGTCGTTAACGAAAACACAGTCGCTGGACGAGTGGTTTTCTGGTACAA
TCAGCGCTAGAGTGGAGACAGCGGTGCCACACACGAGTCTCGTGCTGGTG
AGCTTCGACGTCGCCTATACCGTACCTGCGCAGGAGCAGCAGGGGGACAG
CAGTGGGGAGGCCCAGACAGTGGTGGAGAAGGGCATCAAGAGCGACCGCA
TTCGGTTGCTGGCCCAAGCAGACGGCACTCTGCCGGAAGACAACCTGGGC
ACAGCACCGACTAGGCCTGCTGCTGCGGTCGTTAACGAAAACACAGCACT
CTATATTGTGCCGTGTACAGGGATCGGTATGTGGCAGACGGTGGCGGTGC
GCGAGGTGGACGAGGAGGCGGAACACTCTATATTGTGCCGTGTACAGGGA
TCGGTATGTGGCAGACGGTGGCGGTGCGCGAGGTGGACGAGGAGGCGGAA
back to top