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Homology
BLAST of mRNA_D-dudresnayi_contig974.28530.1 vs. uniprot
Match: A0A6H5JP83_9PHAE (EAF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP83_9PHAE) HSP 1 Score: 109 bits (272), Expect = 6.360e-24 Identity = 55/79 (69.62%), Postives = 61/79 (77.22%), Query Frame = 1
Query: 37 RWSAEMEYESRDPVNSRPVRFCGDAARAQDMECVLVFDGNQFVMDRVSVVGGLKNVQEDFAGPVRTTGGEDVIASMAKR 273
RW+AEMEYESRDP N PVRF GDA RAQD+ECVLVFDG QFVMDRV+VVGGLKNVQE +GG A++AKR
Sbjct: 973 RWAAEMEYESRDPSNPEPVRFTGDAVRAQDVECVLVFDGQQFVMDRVAVVGGLKNVQEFDGLAAGGSGGPTPEATLAKR 1051
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-00_003540.1 |
| Exons | 4 |
| Model size | 644 |
| Cds size | 576 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930928.6986306-UTR-D-dudresnayi_contig974:9909..9926 | 1622930928.6986306-UTR-D-dudresnayi_contig974:9909..9926 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig974 9910..9926 - |
| 1690557968.8529234-UTR-D-dudresnayi_contig974:9909..9926 | 1690557968.8529234-UTR-D-dudresnayi_contig974:9909..9926 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig974 9910..9926 - |
| 1622930928.804695-UTR-D-dudresnayi_contig974:14465..14516 | 1622930928.804695-UTR-D-dudresnayi_contig974:14465..14516 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig974 14466..14516 - |
| 1690557968.9061515-UTR-D-dudresnayi_contig974:14465..14516 | 1690557968.9061515-UTR-D-dudresnayi_contig974:14465..14516 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig974 14466..14516 - |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig974.28530.1 >prot_D-dudresnayi_contig974.28530.1 ID=prot_D-dudresnayi_contig974.28530.1|Name=mRNA_D-dudresnayi_contig974.28530.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=192bp
MEYESRDPVNSRPVRFCGDAARAQDMECVLVFDGNQFVMDRVSVVGGLKN
VQEDFAGPVRTTGGEDVIASMAKRRKQDKLKKEQKDKATQQKERRREEKR
RAKEGGGGVEVEERGRRADDEKAEGVDSEATRSGGGKAGGDEKGRKADNS
GVVVTSANRLSQPKKATSNESRSATGRGLSGDGSASRNRSS* back to topmRNA from alignment at D-dudresnayi_contig974:9910..14516- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-dudresnayi_contig974.28530.1 ID=mRNA_D-dudresnayi_contig974.28530.1|Name=mRNA_D-dudresnayi_contig974.28530.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4607bp|location=Sequence derived from alignment at D-dudresnayi_contig974:9910..14516- (Desmarestia dudresnayi DdudBR16 monoicous)
CGAGGGGCCGACGGAAAGACGGACGCCGACAGCGCTCGCTGGAGCGCGGA
GATGGAGTACGAGAGCAGGGACCCGGTAAACTCGCGACCGGTGCGCTTCT
GCGGCGATGCTGCCAGGTGTGTTTACACAGAATCTGTTGAGCGAGAGGCG
ACAAGCCAGCAGGCTATAGCTATTGTAGCCGTCGTCATTTTATTTGTCTT
GCGTGCGCCCGGGGGCTCGCTTGTAACGATGCGTGTGTGAGTGAATGAGT
GAGTGAGTGCATGAGTGCGTCGGGTTGGACAGTCAACAGAGTATGATGGC
TTTTCTTGCGACAGGAGGACTTGAAGGAAGCAACCCATGTTAGCCCATGT
ACTACTCTGTACATGTACAACACGTTTTTTTTTTTTTAATGTATTTTTTG
TTATGTAACTTATCACTTTTAACTTCCCAGTCCAGCTCACAGAAGCTCAT
CGCTCAGTGCACCTGTCTGAGCAAGCCGTCGTCATAGGTGTCTTCCTTCT
CTACCCCCCCCCCCCGGTACATGTCTTAAGTTTTATCGCACACAAGGTTC
GGCATTCCCATAGATAGGAGTAGCCCGTCGATTTTTATCTGTGTATGCTT
ATCCCCACTCTCGCGCTGCAGAGCCCGATGGTGTAGTAAATGGTACCAAT
AGTGTACACAACCAAAACCTTTTTTAGCAACAGATAGTCTACGTAAACAC
TCATACTCTCTTTTTTTGTCTTTCTTTTCTTGCTTTTCTTCCTTTTTTGT
TTATTTTCTTCGTGCACCTTCGTGACCAGTGAATCAGTCAATCAATCAAT
GAACCACTCAATCAATCAACCAATCAATCAATCAATGTGTGGAGGAATCT
TCAGTCCCCGTGGACCTTTGCCCCATCTAACCTCAACGACATCGCCTTGA
TTTCCTGCTGTTTTTTGCTTCCGTACTCTTAAGGGCTCAGGACATGGAGT
GCGTGCTTGTGTTCGACGGGAACCAGTTCGTCATGGATCGCGTCTCGGTC
GTTGGGGTAAGTCGTCGAAACAGCGCTGTCGCAAATACGATTGACTGCCG
CGTCAATCCGTTAAAAAAGTTTGGGTTTTATTAAGTTTTTTACGCGTTTT
GTGTATGATAGCATATGGTTGTGAATGGTTCCAAACCAAGAAAATTCGAG
TACGTATTCGCATTATTCTTTAGATAGCAATTTCTTAGAAAGTTATTTGC
GTTTATAGGGTTAGGGTTAGCAACGGAAATTTCTAGCATTTCATGTACGC
CACGTCCATACTGTTAAGCATAATGAAAACACAACTACAGTAATATGCGA
TATCCATCCAAACAGTGTAGTACTACCTCGAAAATGCTGCCCATCGTGAT
GATAGGGCACCGGCGATCGGGGCACACGGTTGACCAGAGCGTGGGGCTCT
GCCGATTTTTCGAACCGACATGTTTTGCCTGCCTGTCATCGCCTTACCAC
CACGTTGTACATTGTGCTTGCCCGGTTGCTGTCAAGAAAGCCTTCCATGA
GAGTAGTAAAAAAAAAAAAAAACACTCACACACACAACTCGCCAGTAGAC
TTTACAATGTGTTCGAGGGCTGGTTTTATCTAACTTTTTTACTTGCTGTT
ATTATGGTGTCGTCGTTCGGTTAGGGATAGGGTTATAGTTCTAGAAAATG
TTCCGAATTGCTGAACAGCCCACGCTGGTACTATCAATTCTAAAAAAAAA
GACATCCTAAAAGATTCCCCCGAACAAGTTGGAAGTAGGCTCCAACTCGC
CCGCGACGGACTGACCTTTTCTTTTTTTTTTTCCATTTATCAGGGGCTCA
AGAATGTCCAGGAAGACTTCGCGGGGCCCGTCAGAACGACGGGAGGCGAG
GATGTAATCGCGTCGATGGCGAAGAGAAGAAAGCAAGACAAGCTTAAGAA
GGAGCAAAAGGACAAGGCCACGCAGCAGAAGGAGAGACGGAGAGAGGAAA
AGAGAAGAGCCAAAGAAGGGGGAGGGGGTGTCGAAGTGGAGGAGAGGGGT
AGGAGGGCGGATGATGAGAAAGCCGAGGGCGTTGACAGCGAGGCAACACG
AAGCGGTGGCGGCAAGGCAGGAGGCGACGAAAAGGGGAGGAAGGTATGAA
CGCGATGCATAGAGCTATATCCATTACAGTACGTAGTAGGCCGTTGTATG
ATACTCCGTATTTGATAGTAGTACACCGAGTAGAGCTCTATGCCCGCTGC
GTGAGTATGATGTACAATAATGAAATAAAATAAATTTTGGTAAACAGGGA
AGGCGAATATATCTGTATGGATAGGTGAAGAAGTAGATATGACTGTTGTG
CATGGCCAAGGGCTGGAAGAAAAGAAGAGGAGCAGGGTCGGATATTATTG
GTGTTGGAGGTGGAGTGTAGGAGGGGTGGCAGCAGGGATTCCTTTGGAGC
TAGTTGCATGGAGATGAAGTTGGGGGTTGTTGGGGTTTGTTGGTGTTGGG
TAGTACAGTAGGTAGAAGGAGTAGGGGTTGGCGTTGGAGTTGAAGTTAAT
TAATTGGGGTTCTGGTTGAGGTGGGGGGGGGAGTAGAGGTAGGGGTTGGA
ATTTGTGTTGCGGGTTGGCGTCGTTTTTTGGAGTAGAGAGTGATCGATTG
ATGAAGTTGGTTGTCACTCATAGTGGTTTAGGATGGGGTAGGGGATTAGG
ATGGGGTAGTCGTACTTCTTTCAGGTAAAAGGTGTCGCCGACCTTCACTT
GGCGCAGCTTCATCATCATCAGAAAAAATAAGGCACGCGAAGCGTGCCGT
TTTTTGCGCGTGCTTGTATACACATATGGATAGGTTTAATCCCTGCGTTT
TCTGAGCCCGGCGCGGATTGGCCGGGACCCGGGCGTATCAGGCTCTGGTT
GTGGCCGAGAGATGTCCCGAATCAACCATCATTGTAGCTTTGGGAAGATT
CCAGGAAAAAAATGGAGCCGGCCGCGGCGCTGAACAAAAAAAAAGCCATA
GGTCGAACCGGCCACCCGGGGTGGGAGGGGGGTTGAGGGCCCAAGTCACC
CCCCACGCAGAAACCCTTCCACGTGTGTGCAACTCCACGCAAACAGGTAT
ACTGGTGGGAGGATCCCTGGTGGAAATCGCCACCCATGGTATGGAAACCT
CGCTCCAGGGTGGCCAACGCCCCATCCCCGGCGAATACAACGCCTTCGAC
TTTTGTACAACTCCGTGATGCCGGGGATGACAGCAGGAGGATCCCGGCAG
AACGTCGCCCCCCACGGTGTAGAAACCCGCCTCGGAGTAGACAGAGGCCC
GGGCCATCCCCGGCGCCGAATCCCTTCCACGCATGTGCAACTACCCGCCG
ACGGGGAGGATAGCGTGAGAATGCCGGGTGGAAATCTCATCCCACGGTGT
GGAAACCCCGCTCCGGGGTGGACAATACGCCCCACCCCCGGAGAGTTCTA
GGCCTTCGACATATTTACAACTCCGCAATACCGGGGATGACAGCGGGGGG
GTCCCGGTTAGACAGAGGCCCCGAGCCATCCCCGGTGCAGAAACCCTTCC
ACGTAACCCTAAACCTACTTGAATAGAGTATGAGTCGAAAACGCCCTCCA
CTTATCGGGAACCCCGCCACCCCGGGGACGAAAAAAGACCATCCCCGGAT
CAAAAATGCCTTCCGTGGTGGGGAAACCCCGCAAAAAAGATATTGGTGAT
GCACTAACTACTAGGGTAAAGTATGGTTTTCGTCCCTTAACGGTCGCCGG
GGTCCCGGGACTCGAAAACTACTTGAATAAAGTATGTAGGTAGCGAAAGT
CTTCCACGTACCGGGAACCCCGCCAACCCGGGGACGAGAAAAGGCGATCC
CCGGGTCAAAAACGCCTTCCGTGATTTGGGAACTCCGCCAAACCCGGAGA
CGGAAAGGCCAAATTTCCGGATCAAAAACGCCTTTCGTGGTGGGGAAACC
CCGCAAATAAACAAAAGTGAAACCTAGGGATGAAACAGGACGATCCCCGG
GGCCGGAATAACTCTTTCCAAAGCCGAGGACGGATAGGTCAGATCCCGGC
GTCAAAAGCGCAATGCATGGTGGCGAAACCCCGCGAAAAACAAAACGCGC
CAATCCTTTCTTTGCTGCGTCTGTCTGGTGGCTGGTGGCTGTGACACTAA
CTACTTCAATAATTATAGTTTTTGGTCAGTCGGTCAGTCAGTCAGTCGGT
CGGTCGGTCGTTCGTTCGTTCGGTCGGCGTTCGGTCGATTGGGTCGGGTT
GGATGGTGTGGAAACACTTCGGTTGAGACTACTAGACACCACAGAGTGCC
GTTTTTTTTTTATAAAGCACAAAGAATCCCAACTCAATCTTCTCTTGACA
ACCCTGCAAAAACAAATGGCGGGCGAAGCACGCCGTTTTTTGCGCTTGTA
ATAATAATAATATCTGGCATCATAACAGGTTTTGGAAACTTCAAACCGAA
CTTGACTGTACATATGCCCCCAACGTGTCTTCCTTGTTGCCGTTGCTTCC
AGGCAGACAACAGTGGCGTCGTGGTCACGTCAGCCAACAGGCTGTCGCAG
CCCAAGAAGGCGACCTCGAACGAAAGCAGGAGTGCAACGGGTCGCGGTCT
TTCAGGCGATGGTAGTGCAAGCAGAAATCGAAGCAGCTAGATTAGGCGCG
CGCGGGG back to topCoding sequence (CDS) from alignment at D-dudresnayi_contig974:9910..14516- >mRNA_D-dudresnayi_contig974.28530.1 ID=mRNA_D-dudresnayi_contig974.28530.1|Name=mRNA_D-dudresnayi_contig974.28530.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1152bp|location=Sequence derived from alignment at D-dudresnayi_contig974:9910..14516- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGAGTACGAGAGCAGGGACCCGGTAAACTCGCGACCGGTGCGCTTCTG
CGGCGATGCTGCCAGATGGAGTACGAGAGCAGGGACCCGGTAAACTCGCG
ACCGGTGCGCTTCTGCGGCGATGCTGCCAGGGCTCAGGACATGGAGTGCG
TGCTTGTGTTCGACGGGAACCAGTTCGTCATGGATCGCGTCTCGGTCGTT
GGGGGCTCAGGACATGGAGTGCGTGCTTGTGTTCGACGGGAACCAGTTCG
TCATGGATCGCGTCTCGGTCGTTGGGGGGCTCAAGAATGTCCAGGAAGAC
TTCGCGGGGCCCGTCAGAACGACGGGAGGCGAGGATGTAATCGCGTCGAT
GGCGAAGAGAAGAAAGCAAGACAAGCTTAAGAAGGAGCAAAAGGACAAGG
CCACGCAGCAGAAGGAGAGACGGAGAGAGGAAAAGAGAAGAGCCAAAGAA
GGGGGAGGGGGTGTCGAAGTGGAGGAGAGGGGTAGGAGGGCGGATGATGA
GAAAGCCGAGGGCGTTGACAGCGAGGCAACACGAAGCGGTGGCGGCAAGG
CAGGAGGCGACGAAAAGGGGAGGAAGGGGCTCAAGAATGTCCAGGAAGAC
TTCGCGGGGCCCGTCAGAACGACGGGAGGCGAGGATGTAATCGCGTCGAT
GGCGAAGAGAAGAAAGCAAGACAAGCTTAAGAAGGAGCAAAAGGACAAGG
CCACGCAGCAGAAGGAGAGACGGAGAGAGGAAAAGAGAAGAGCCAAAGAA
GGGGGAGGGGGTGTCGAAGTGGAGGAGAGGGGTAGGAGGGCGGATGATGA
GAAAGCCGAGGGCGTTGACAGCGAGGCAACACGAAGCGGTGGCGGCAAGG
CAGGAGGCGACGAAAAGGGGAGGAAGGCAGACAACAGTGGCGTCGTGGTC
ACGTCAGCCAACAGGCTGTCGCAGCCCAAGAAGGCGACCTCGAACGAAAG
CAGGAGTGCAACGGGTCGCGGTCTTTCAGGCGATGGTAGTGCAAGCAGAA
ATCGAAGCAGCTAGGCAGACAACAGTGGCGTCGTGGTCACGTCAGCCAAC
AGGCTGTCGCAGCCCAAGAAGGCGACCTCGAACGAAAGCAGGAGTGCAAC
GGGTCGCGGTCTTTCAGGCGATGGTAGTGCAAGCAGAAATCGAAGCAGCT
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