prot_D-dudresnayi_contig9713.28490.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9713.28490.1
Unique Nameprot_D-dudresnayi_contig9713.28490.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length126
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 1.340e-71
Identity = 118/124 (95.16%), Postives = 119/124 (95.97%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 124
            MSGKGKGGRG  KKSTTRSAKAGLQFPVGRVGRFLK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VKK
Sbjct:    1 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 4.580e-70
Identity = 117/123 (95.12%), Postives = 118/123 (95.93%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 123
            MSGKGKGGRG  KKSTTRSAKAGLQFPVGRVGRFLK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VK
Sbjct:   46 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 3.120e-66
Identity = 109/120 (90.83%), Postives = 115/120 (95.83%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  KKST++S+KAGLQFPV R+GR+LK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 1.600e-65
Identity = 109/120 (90.83%), Postives = 115/120 (95.83%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  KKST++S+KAGLQFPV R+GR+LK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   52 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169
[Close]
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 203 bits (516), Expect = 2.110e-65
Identity = 107/126 (84.92%), Postives = 117/126 (92.86%), Query Frame = 0 
Query:    1 MSGKGKGGRG-DAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKKA 125
            M+GKGKGGRG +AKKST++S+KAGLQFPV R+GRFLK G+YA+RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK    A
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKTASAA 126
[Close]
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 6.210e-65
Identity = 106/120 (88.33%), Postives = 113/120 (94.17%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  KK T+RSAKAGLQFPVGR+GRF+K GKY+ RVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.130e-63
Identity = 106/123 (86.18%), Postives = 113/123 (91.87%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 123
            MSGKGKGGRG  KKSTT SAKAGLQFPVGR+GR+L+ GKYA R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK  K
Sbjct:    1 MSGKGKGGRG-GKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
[Close]
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: A0A835ZBB6_9STRA (Histone H2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB6_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.570e-63
Identity = 105/126 (83.33%), Postives = 115/126 (91.27%), Query Frame = 0 
Query:    1 MSGKGKGGRG-DAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKKA 125
            M+GKGKGGRG + KK T++SAKAGLQFPV R+GR+LK G+YA RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELN+LLG VTIASGGVLPNIHAVLLPKK   KA
Sbjct:    1 MAGKGKGGRGAEGKKITSQSAKAGLQFPVARMGRYLKQGRYADRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNRLLGNVTIASGGVLPNIHAVLLPKKTAAKA 126
[Close]
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.610e-63
Identity = 104/120 (86.67%), Postives = 113/120 (94.17%), Query Frame = 0 
Query:    1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG+ KKSTT SAKAGLQFPVGR+GR+L+ GKYA R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKK
Sbjct:    1 MSGKGKGGRGE-KKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKK 119
[Close]
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 198 bits (503), Expect = 2.890e-63
Identity = 103/123 (83.74%), Postives = 116/123 (94.31%), Query Frame = 0 
Query:    3 GKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKKA 125
            GKGKGGRGD KK+ ++SAKAGLQFPVGRVGRFLK G+YA+RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK   K+
Sbjct:    5 GKGKGGRGD-KKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSKS 126
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI1.340e-7195.16Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI4.580e-7095.12Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE3.120e-6690.83Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI1.600e-6590.83Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A836CG77_9STRA2.110e-6584.92Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
D8LLP0_ECTSI6.210e-6588.33Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A6U2JFS4_9STRA1.130e-6386.18Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A835ZBB6_9STRA1.570e-6383.33Histone H2A n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A448ZH28_9STRA1.610e-6386.67Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A835ZLE9_9STRA2.890e-6383.74Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 100..118
score: 76.04
coord: 14..36
score: 68.99
coord: 43..58
score: 90.36
coord: 58..71
score: 90.54
coord: 72..86
score: 74.98
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..123
e-value: 2.5E-79
score: 279.5
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..125
e-value: 1.9E-62
score: 210.8
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 5..124
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 11..89
e-value: 1.7E-15
score: 57.6
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 92..125
e-value: 6.9E-19
score: 67.3
NoneNo IPR availablePANTHERPTHR23430:SF233HISTONE H2A.6-RELATEDcoord: 1..122
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 1..122
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 22..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9713contigD-dudresnayi_contig9713:1754..2131 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9713.28490.1mRNA_D-dudresnayi_contig9713.28490.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9713 1754..2131 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9713.28490.1 ID=prot_D-dudresnayi_contig9713.28490.1|Name=mRNA_D-dudresnayi_contig9713.28490.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=126bp
MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPV
YLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGE
VTIASGGVLPNIHAVLLPKKVVKKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR032458Histone_H2A_CS