mRNA_D-dudresnayi_contig9712.28488.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9712.28488.1
Unique NamemRNA_D-dudresnayi_contig9712.28488.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9712.28488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9712contigD-dudresnayi_contig9712:10936..11439 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size504
Cds size312
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9712.28488.1prot_D-dudresnayi_contig9712.28488.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9712 10996..11307 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930923.2758467-UTR-D-dudresnayi_contig9712:10935..109951622930923.2758467-UTR-D-dudresnayi_contig9712:10935..10995Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9712 10936..10995 +
1690557966.9191825-UTR-D-dudresnayi_contig9712:10935..109951690557966.9191825-UTR-D-dudresnayi_contig9712:10935..10995Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9712 10936..10995 +
1622930923.3211064-UTR-D-dudresnayi_contig9712:11307..114391622930923.3211064-UTR-D-dudresnayi_contig9712:11307..11439Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9712 11308..11439 +
1690557966.9356024-UTR-D-dudresnayi_contig9712:11307..114391690557966.9356024-UTR-D-dudresnayi_contig9712:11307..11439Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9712 11308..11439 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930923.293988-CDS-D-dudresnayi_contig9712:10995..113071622930923.293988-CDS-D-dudresnayi_contig9712:10995..11307Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9712 10996..11307 +
1690557966.9272969-CDS-D-dudresnayi_contig9712:10995..113071690557966.9272969-CDS-D-dudresnayi_contig9712:10995..11307Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9712 10996..11307 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9712.28488.1

>prot_D-dudresnayi_contig9712.28488.1 ID=prot_D-dudresnayi_contig9712.28488.1|Name=mRNA_D-dudresnayi_contig9712.28488.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=104bp
MYVGVLAIWCPVSFEIPLGPTGMIRLSPIRQRCFHRESLSLDVRWHLDWI
GVRTPFNSGTYAHWGTNKNNERYVKHPYGQGTHGGFIATGRSAHTTHKKI
KLL*
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mRNA from alignment at D-dudresnayi_contig9712:10936..11439+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9712.28488.1 ID=mRNA_D-dudresnayi_contig9712.28488.1|Name=mRNA_D-dudresnayi_contig9712.28488.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=504bp|location=Sequence derived from alignment at D-dudresnayi_contig9712:10936..11439+ (Desmarestia dudresnayi DdudBR16 monoicous)
AGCCTCTCTGCTGATCCGTCCCGAAAAAAACGACAAAAACCTCGTACTGC
GCGCACGCGCATGTATGTAGGAGTTTTAGCGATATGGTGTCCAGTGAGCT
TTGAGATCCCGCTCGGTCCAACAGGTATGATACGGCTCTCCCCAATCAGA
CAGCGCTGTTTTCATAGGGAATCCCTTTCATTGGACGTCCGCTGGCACCT
TGATTGGATTGGTGTTAGAACGCCCTTCAACAGTGGTACGTATGCTCACT
GGGGAACGAACAAAAATAACGAGAGATACGTAAAACATCCTTACGGGCAA
GGCACACACGGAGGCTTTATTGCAACAGGACGGAGCGCACACACCACGCA
CAAAAAAATAAAACTATTATAAAATCAATCTCCCAGTGCCAGTCACCAAA
GACGGGCTCTCCTATGCTAAGGGTGGCTCTAAAAGCAGTAAGATAATAAT
GAAAAAAGAAGCGGTGGGGACAGAGAGGGGCTAACAAACCTCACTCGACT
TCGT
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9712:10936..11439+

>mRNA_D-dudresnayi_contig9712.28488.1 ID=mRNA_D-dudresnayi_contig9712.28488.1|Name=mRNA_D-dudresnayi_contig9712.28488.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at D-dudresnayi_contig9712:10936..11439+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTATGTAGGAGTTTTAGCGATATGGTGTCCAGTGAGCTTTGAGATCCC
GCTCGGTCCAACAGGTATGATACGGCTCTCCCCAATCAGACAGCGCTGTT
TTCATAGGGAATCCCTTTCATTGGACGTCCGCTGGCACCTTGATTGGATT
GGTGTTAGAACGCCCTTCAACAGTGGTACGTATGCTCACTGGGGAACGAA
CAAAAATAACGAGAGATACGTAAAACATCCTTACGGGCAAGGCACACACG
GAGGCTTTATTGCAACAGGACGGAGCGCACACACCACGCACAAAAAAATA
AAACTATTATAAATGTATGTAGGAGTTTTAGCGATATGGTGTCCAGTGAG
CTTTGAGATCCCGCTCGGTCCAACAGGTATGATACGGCTCTCCCCAATCA
GACAGCGCTGTTTTCATAGGGAATCCCTTTCATTGGACGTCCGCTGGCAC
CTTGATTGGATTGGTGTTAGAACGCCCTTCAACAGTGGTACGTATGCTCA
CTGGGGAACGAACAAAAATAACGAGAGATACGTAAAACATCCTTACGGGC
AAGGCACACACGGAGGCTTTATTGCAACAGGACGGAGCGCACACACCACG
CACAAAAAAATAAAACTATTATAA
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