prot_D-dudresnayi_contig971.28485.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig971.28485.1
Unique Nameprot_D-dudresnayi_contig971.28485.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length139
Homology
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A516AGA0_LINPO (DNA topoisomerase 3-alpha n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=A0A516AGA0_LINPO)

HSP 1 Score: 97.8 bits (242), Expect = 5.360e-21
Identity = 53/103 (51.46%), Postives = 61/103 (59.22%), Query Frame = 0
Query:    6 GEECALRTVSKEGPNQGRQFYCCARQDRSEQC-YFAWADEEP-PDGXXXXSGDGRLCEGH----GEPCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWADE 102
            G+   + TV KEGPN GR F+ C++  + EQC YF WADE P P      +  G+   G     G P    TVRKEG N GR FY CP PQGEQC FFQWADE
Sbjct:  468 GQPSLVLTVRKEGPNMGRVFFKCSKP-QGEQCSYFQWADEPPRPASGSGPANPGQDTAGPACLCGHPSVTLTVRKEGPNTGRMFYKCPMPQGEQCGFFQWADE 569          
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A3M6V831_9STRA (DNA topoisomerase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V831_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 5.520e-21
Identity = 50/121 (41.32%), Postives = 58/121 (47.93%), Query Frame = 0
Query:    2 CPGHGEECALRTVSKEGPNQGRQFYCCARQDRSEQC-YFAWADE----------EPPDGXXXXSGDGRLCEGHGEPCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWADEDQQNSGSSS 111
            CPGH E C  RTV K+GPN+GRQFY C R      C +F W             +P       SG   +C GH   C LR  RK G NQ R+FY C       C FF+W DE  Q   +SS
Sbjct:  785 CPGHDEPCDERTVKKDGPNKGRQFYTCRRSQTDNSCGFFQWKGNITEAPGRPVAQPAPRVAGASGTTPICSGHHTTCDLRITRKAGPNQNREFYCCSFQGAASCGFFEWKDEQCQQQPTSS 905          
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: UPI000719AA75 (DNA topoisomerase 3-alpha-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719AA75)

HSP 1 Score: 94.7 bits (234), Expect = 6.590e-20
Identity = 51/107 (47.66%), Postives = 62/107 (57.94%), Query Frame = 0
Query:    1 VCPGHGEECALRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADEEPPDGXXXXSGDGRLCEGHGEPC------SLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWAD 101
            VC G G + ALRTV KEGPN+GR FY C+R       +F W D+ PP      SGD    +     C      S RTV+K+G N+GRQFY C +PQ  QC FF+WAD
Sbjct:  724 VC-GCGNDAALRTVVKEGPNRGRAFYVCSRAGPQPCDFFMWGDDGPP---APRSGDFGGADNATANCRCGVAASKRTVQKDGPNRGRQFYVCSKPQEAQCGFFEWAD 826          
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A1W4X2E7_AGRPL (DNA topoisomerase n=2 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4X2E7_AGRPL)

HSP 1 Score: 93.6 bits (231), Expect = 1.680e-19
Identity = 50/111 (45.05%), Postives = 62/111 (55.86%), Query Frame = 0
Query:    6 GEECALRTVSKEGPNQGRQFYCCARQDRSEQC-YFAWADEEPPDGXXXXSGDGRLCEGHGE--------PCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWADEDQQNS 107
            GE+ +L TV KEGPN GRQFY C R      C +F WADE+          + R+  G           P +LRTV K G N+GRQFY CP+P G+ C+FF+WADE    S
Sbjct:  866 GEQASLLTVRKEGPNTGRQFYKCRRGKEGGGCDFFLWADED----RNLTLNNTRVLPGASTTPVCMCNTPATLRTVSKAGPNKGRQFYCCPKPMGQGCNFFKWADETDNRS 972          
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A7S2RAZ2_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RAZ2_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.840e-19
Identity = 45/109 (41.28%), Postives = 58/109 (53.21%), Query Frame = 0
Query:    2 CPGHGEECALRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADEEP--------PDGXXXXSGDGRLCEGHGEPCSLRTVRKEGANQGRQFYPCPRPQGE-QCSFFQWAD 101
            CP H + C + TV KEGPNQGR FY C+    ++  +FAWADE                 S     C+ HG PC +  V+KEG NQGR+FY C    G  +C FF+W +
Sbjct:  175 CPEHSQPCRVFTVKKEGPNQGRAFYKCSLPPTAQCKFFAWADENNNKKPGNSNKSNVKHESKSTVTCKEHGHPCRIFKVKKEGPNQGREFYSCSLAPGNGKCKFFKWVE 283          
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A369SHI0_9METZ (DNA topoisomerase n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369SHI0_9METZ)

HSP 1 Score: 91.3 bits (225), Expect = 1.070e-18
Identity = 53/135 (39.26%), Postives = 68/135 (50.37%), Query Frame = 0
Query:    7 EECALRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADEEPPDGXXXXSGDGRLCEGHGEP--------------------CSL----RTVRKEGANQGRQFYPCPRPQGEQCSFFQWADEDQQNSGSSSWGNSGI 117
            EE  L TV K+GPN GRQFY C ++D S   +F WADE         SG       +  P                    C +    RTV+KEGAN+GRQFY C +PQG QC+FF+W D D   + +S+W  +G 
Sbjct:  718 EEAILLTVKKQGPNCGRQFYKCNKRDSSACGFFLWADEPQNQAQRGSSGSRTFSSNNAFPGSSGLHDGNTSGDNSCVKCLCDIPAVSRTVQKEGANKGRQFYCCSKPQGNQCTFFKWVD-DTSAATTSNWNENGT 851          
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: D6WYH2_TRICA (DNA topoisomerase n=2 Tax=Tribolium castaneum TaxID=7070 RepID=D6WYH2_TRICA)

HSP 1 Score: 91.3 bits (225), Expect = 1.070e-18
Identity = 50/119 (42.02%), Postives = 63/119 (52.94%), Query Frame = 0
Query:    8 ECALRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADEEPPDGXXXXSGDGR-----LCEGHGEPCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWADEDQQNSGSSSWGNSGIGYTP 121
            E    TV K+GPN+GR+FY C  Q      +F WA +EP +     +   +      C+    P S RTV KEG N+GR FY CP+P G+ C FFQWADED    G    G+ G G  P
Sbjct:  802 EAVQLTVRKDGPNKGRKFYKCKNQTCD---FFLWASDEPSNANTTINSQQQNDVKCKCD---LPASRRTVSKEGPNKGRPFYCCPKPMGQGCGFFQWADEDNDGGGDGGPGDDGHGGGP 914          
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A653DS45_CALMS (CCHC-type domain-containing protein (Fragment) n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653DS45_CALMS)

HSP 1 Score: 89.7 bits (221), Expect = 1.530e-18
Identity = 49/107 (45.79%), Postives = 62/107 (57.94%), Query Frame = 0
Query:   11 LRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADEEPPDGXXXXSGDGRLCEGH---------GEPCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWADEDQQNSG 108
            L TV K+GPN+GRQFY C     +   +F WA +  P+G    SG  R   G+         G+  +LRTV KEG N+GRQFY CP+P GE C FF+WADE   + G
Sbjct:  189 LLTVRKDGPNKGRQFYKCPEAVCN---FFLWAPD--PNGTASTSGSPRTSFGNVQQDMRCNCGQQAALRTVNKEGPNKGRQFYCCPKPIGEGCKFFKWADESDNDWG 290          
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A8D0BPX6_9SAUR (DNA topoisomerase n=2 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0BPX6_9SAUR)

HSP 1 Score: 90.5 bits (223), Expect = 2.000e-18
Identity = 55/124 (44.35%), Postives = 66/124 (53.23%), Query Frame = 0
Query:    6 GEECALRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADEEPPDGXXXXS---------------GDGRL-CEGH----------GEPCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWADED 103
            G E  L TV KEG NQGRQFY C+    S   +F WAD++P +G                    G GR   EG           G+P  LRTV+KEG NQGRQF+ C +P+ EQC FFQWADE+
Sbjct:  806 GAEAVLLTVRKEGANQGRQFYKCSAGRCS---FFLWADQQPGNGGNGAPRASAPAPGSFGRGERGVGRSRSEGSDPGAGVECRCGQPSVLRTVQKEGPNQGRQFHACSKPREEQCGFFQWADEN 926          
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A6P8I7Q1_ACTTE (DNA topoisomerase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I7Q1_ACTTE)

HSP 1 Score: 90.5 bits (223), Expect = 2.010e-18
Identity = 51/133 (38.35%), Postives = 68/133 (51.13%), Query Frame = 0
Query:    1 VCPGHGEECALRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADE---------------EPPDGXXXXSGDGRLCEGHG---------------EPCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWADED 103
            VC G G    L TV KEGPN+GR FY C+++D     +F W D+               +PP+     + +G   + +                EP   RTV+K+G NQGRQFY CP+P G+ CSFFQWAD+D
Sbjct:  851 VC-GCGHPATLLTVKKEGPNKGRPFYRCSQRDGXCD-FFLWGDDGAPANNTASGAPFGSQPPNRNTSWNNNGGFQDSNSNQGFDDPNQTVCNCNEPAVSRTVKKDGPNQGRQFYACPKPMGQGCSFFQWADQD 981          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A516AGA0_LINPO5.360e-2151.46DNA topoisomerase 3-alpha n=1 Tax=Lingulodinium po... [more]
A0A3M6V831_9STRA5.520e-2141.32DNA topoisomerase n=2 Tax=Peronospora effusa TaxID... [more]
UPI000719AA756.590e-2047.66DNA topoisomerase 3-alpha-like n=1 Tax=Priapulus c... [more]
A0A1W4X2E7_AGRPL1.680e-1945.05DNA topoisomerase n=2 Tax=Agrilus planipennis TaxI... [more]
A0A7S2RAZ2_9STRA1.840e-1941.28Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A369SHI0_9METZ1.070e-1839.26DNA topoisomerase n=1 Tax=Trichoplax sp. H2 TaxID=... [more]
D6WYH2_TRICA1.070e-1842.02DNA topoisomerase n=2 Tax=Tribolium castaneum TaxI... [more]
A0A653DS45_CALMS1.530e-1845.79CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A8D0BPX6_9SAUR2.000e-1844.35DNA topoisomerase n=2 Tax=Salvator merianae TaxID=... [more]
A0A6P8I7Q1_ACTTE2.010e-1838.35DNA topoisomerase n=1 Tax=Actinia tenebrosa TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010666Zinc finger, GRF-typePFAMPF06839zf-GRFcoord: 59..102
e-value: 3.5E-19
score: 68.6
coord: 2..44
e-value: 6.0E-15
score: 55.1
NoneNo IPR availablePANTHERPTHR22748:SF4DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 2coord: 1..37
coord: 59..99
IPR004808AP endonuclease 1PANTHERPTHR22748AP ENDONUCLEASEcoord: 1..37
coord: 59..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig971contigD-dudresnayi_contig971:7952..9104 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig971.28485.1mRNA_D-dudresnayi_contig971.28485.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig971 7952..9104 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig971.28485.1 ID=prot_D-dudresnayi_contig971.28485.1|Name=mRNA_D-dudresnayi_contig971.28485.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=139bp
VCPGHGEECALRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADEEPPDGG
GGGSGDGRLCEGHGEPCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWA
DEDQQNSGSSSWGNSGIGYTPAAGGRGPGSGGRSGSRGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010666Znf_GRF
IPR004808AP_endonuc_1