mRNA_D-dudresnayi_contig10235.279.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10235.279.1
Unique NamemRNA_D-dudresnayi_contig10235.279.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig10235.279.1 vs. uniprot
Match: D8LKA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA8_ECTSI)

HSP 1 Score: 627 bits (1618), Expect = 1.950e-215
Identity = 351/549 (63.93%), Postives = 403/549 (73.41%), Query Frame = 2 
Query:   32 MAMDMPPPSPRTEKRRLTGAAEDLEALASPSKRGTPT-SRSFFS-AGLDVSRTPADVSWIREQAGTTPRALDRDFLEASPAAEVTGGGRIGGAGNTRGASNGAPGAATGYTTRGKMYNRRTWTKEENDQLQEGMAALGGPNAECGRNEWNAIARDFLKDSRTGTQCATHWKMVLKPALLKGVWSQEEDSHICDCVARGVTDWSEVASFLPKRRAKHCRERWTNHLDPSISKAE-WSSAEEVQLLSAVEAHGTNWTHIARLLPGRSESTIQEHWNAVVFRNASSAGGVRRGRSRMADASATASGARGRVRASALPVE-TERHLSTGKNSGVVPTGVGGGQAEPAVILTERERALIDHAYKTGLTAAGVGEPLALSMEEDDIFGPLTAALLKTGGSTSASCSPAKMPPPSPTISPLKLTKQLHPDYTAIGDQLGDGWGVDDDPALADLYRSLDNIGESLFNEDTFELSFDFDSVDKPSPSCGGGVT---QSNPSKDWE--NLLTRQERENSPFRRAAAKAAANLEQRLSPAKRNVQ---KQRNLEEACARA 1642
            MAM+MPPPSPRTEKRRL GA  +LE LASPSKRGTP+ +RSFFS +G D  RTPADVSWIREQAGTTPRALDRDFL ASPAA V  G                         + KM+NRRTWTKEENDQL EG+A+LGGPN+  G+NEWN IA  FLK SRTGTQCATHWKMV+KPALLKGVWS EED+ I DCVARGVTDW+EVA+ LPKR+ KHCRERW+NHLDPS+ K   W++AEEV+L+SAVEA+GTNW+ IAR  PGRSE+ IQ+HWN +VFRN  S GG RRGRS M      A   RGR +AS LP E +E  L       ++       Q +PAV LT+RE+AL+DHA+KTGL    +G  L LS EEDD+F PLTAALL+        CSP+ MPPPSPT SPLK  KQ  PDYT+IGDQLGDGW VDDDPALADLYRSLDNIGESLFNED FELSFDFD+V KP+PSC  G++   Q+NPSK W+   LL  QE+  SPFR+AAA AAA L ++ SPAKR  Q   K + LEEACARA
Sbjct:    1 MAMNMPPPSPRTEKRRLAGAPAELEVLASPSKRGTPSKNRSFFSTSGSDNPRTPADVSWIREQAGTTPRALDRDFLAASPAAAVDVGXXXX---XXXXXXXXXXXXXXXXXXKSKMFNRRTWTKEENDQLHEGIASLGGPNSNFGKNEWNKIAHHFLKGSRTGTQCATHWKMVVKPALLKGVWSAEEDAVIFDCVARGVTDWTEVAAALPKRKPKHCRERWSNHLDPSLRKGPGWTAAEEVKLVSAVEANGTNWSLIARHFPGRSEAVIQQHWNELVFRN--SVGG-RRGRSGMESGGGVACSGRGRAKASTLPGEPSEIFLGDLGGQDLIARETEQQQQQPAVTLTDREKALMDHAFKTGLNGCDIGS-LTLSSEEDDLFAPLTAALLRDEEGCGG-CSPSGMPPPSPTCSPLKAHKQ-QPDYTSIGDQLGDGWVVDDDPALADLYRSLDNIGESLFNEDNFELSFDFDNVGKPAPSCDSGLSCGQQTNPSKSWDAPGLLPSQEKSGSPFRQAAANAAATLGRQHSPAKREPQGPSKGKELEEACARA 540
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BLAST of mRNA_D-dudresnayi_contig10235.279.1 vs. uniprot
Match: A0A6H5JZ10_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ10_9PHAE)

HSP 1 Score: 459 bits (1182), Expect = 2.530e-151
Identity = 295/525 (56.19%), Postives = 338/525 (64.38%), Query Frame = 2 
Query:  467 EWNAIARDFLKDSRTGTQCATHWKMVLKPALLKGVWSQEEDSHICDCVARGVTDWSEVASFLPKRRAKHCRERWTNHLDPSISKAE-WSSAEEVQLLSAVEAHGTNWTHIARLLPGRSESTIQEHWNAVVFRNASSAGGVRRGRSRMADASATASGARGRVRASALPVE-TERHLST--GKNSGVVPTGVGGGQAEPAVILTERERALIDHAYKTGLTAA-----------------------------------GVGEPLALSMEEDDIFGPLTAALLKTGGSTSASCSPAKMPPPSPTISPLKLTKQLHPDYTAIGDQLGDGWGVDDDPALADLYRSLDNIGESLFNEDTFELSFDFDSVDKPSPSCGGGVT---QSNPSKDWE--NLLTRQERENSPFRRAAAKAAANLEQRLSPAKRNVQ---KQRNLEEACARAXXXXXXXXXXXASETIPPVTAQ-------------------AAGPRVKQGFLRRL-FSADTKPGK-QLRAPFFTVRGCLSEANAPP 1837
            EWN IA  FLK SRTGTQCATHWKMV+KPALLKGVWS EED+ I DCVARGVTDW+EVA+ LPKR+ KHCRERW+NHLDP++ K   W++AEEV+L+SAVEA+GTNW+ IAR  PGRSE+ IQ+HWN +VFRN  S GG RRGR+        A  ARGR +AS LP E +E  L    G++     T         AV LT+RE+AL+DHA+KTGL AA                                    +G  L LS EEDD+F PLTAA           CSP+ MPPPSPT SPLK  KQ  PDYT+IGDQLGDGW VDDDPAL DLYRSLDNIGESLFNED FELSFDFD+V KP+PSC  G++    +NPSK W+  +LL  QE   SPFR+AAA AAA L  + SPAKR  +   K + LEEACARAXXXXXXXXXXX                               AGPRV+QGFLRRL FSA   P K +   PF TVRGCLSEANAPP
Sbjct:    8 EWNKIAHHFLKGSRTGTQCATHWKMVVKPALLKGVWSPEEDAVIFDCVARGVTDWAEVAAALPKRKPKHCRERWSNHLDPNLRKGPGWTAAEEVKLVSAVEANGTNWSLIARHFPGRSEAVIQQHWNEIVFRN--SVGG-RRGRTGTDSGGGVACSARGRAKASTLPAEPSEIFLGDLGGQDLIARETEQXXXXXXXAVTLTDREKALMDHAFKTGLNAATGSARVAQQXXXXXXXXXXXXXXXXGAVAXXPKGCDIGS-LTLSSEEDDLFAPLTAAXXXXXXXXXX-CSPSGMPPPSPTCSPLKAHKQ-QPDYTSIGDQLGDGWVVDDDPALDDLYRSLDNIGESLFNEDNFELSFDFDNVGKPAPSCDSGLSCGQPTNPSKSWDAPSLLPSQETSGSPFRQAAANAAATLGCQHSPAKREPRGSSKGKELEEACARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPVAGPRVRQGFLRRLLFSAGVTPTKPRSHTPFSTVRGCLSEANAPP 526
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BLAST of mRNA_D-dudresnayi_contig10235.279.1 vs. uniprot
Match: A0A7S2RZ51_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ51_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.980e-40
Identity = 92/219 (42.01%), Postives = 122/219 (55.71%), Query Frame = 2 
Query:  233 ALDRDFLEASPAAEVTGGGRIGGAGNTRGASNGAPG-AATGYTTRGKMYNRRT---------WTKEENDQLQEGMAALGGPNAECGRNEWNAIARDFLKDSRTGTQCATHWKMVLKPALLKGVWSQEEDSHICDCVARGVTDWSEVASFLPKRRAKHCRERWTNHLDPSISKAEWSSAEEVQLLSAVEAHGTNWTHIARLLPGRSESTIQEHWNAVVFR 859
            AL      A+PA  V GG  +GGAG    +S G PG  ATG +                   WTKEE+ +L+  +AA+G  N       W  IA D+L D R+  QC   W+ VL+P L+KG W++EED  I DC+  G+T WSE+A  +P R  K CRERW NHLDPS+ K  W+  E+  L+ A    G +WT IA+LLPGRSE+ ++  WN+   R
Sbjct:  198 ALGSGVPSANPALGVAGG--LGGAGVVP-SSTGVPGPVATGSSXXXXXXXXXXXXXXXXXXRWTKEEDQKLRAAVAAVGPQN-------WKLIASDYLNDQRSDVQCLHRWQKVLQPGLVKGPWTKEEDQIIIDCIEAGITKWSEIAERIPGRIGKQCRERWFNHLDPSLKKGGWTEEEDAVLVEAQSKWGNSWTKIAKLLPGRSENAVKNRWNSATRR 406
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BLAST of mRNA_D-dudresnayi_contig10235.279.1 vs. uniprot
Match: A0A7S2SVF3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVF3_9STRA)

HSP 1 Score: 162 bits (411), Expect = 3.950e-40
Identity = 73/170 (42.94%), Postives = 101/170 (59.41%), Query Frame = 2 
Query:  341 AATGYTTRGKMYNRRTWTKEENDQLQEGMAALGGPNAECGRNEWNAIARDFLKDSRTGTQCATHWKMVLKPALLKGVWSQEEDSHICDCVARGVTDWSEVASFLPKRRAKHCRERWTNHLDPSISKAEWSSAEEVQLLSAVEAHGTNWTHIARLLPGRSESTIQEHWNAV 850
            +A G    GK   R  WTK E+D+L++G+   G         +W+ IA++ L   RT  QC   W+ VL+  L+KG W++EED  I DC+  G+  WSE+A ++P R  K  RERW NHLDP+I K  W+  E+  L  A    G +WT IARLLPGR+E+TI+  WN+ 
Sbjct:   25 SAAGQAAWGKGVKRGRWTKNEDDRLKQGVTLYG-------TTDWSRIAKEVLGGQRTEQQCVQRWRKVLERGLVKGTWTKEEDQIIIDCIEAGINRWSEIAEYIPGRVGKQARERWFNHLDPTIKKGSWTDEEDAILTVAQARWGNSWTKIARLLPGRAENTIKNRWNSA 187
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BLAST of mRNA_D-dudresnayi_contig10235.279.1 vs. uniprot
Match: A0A7S4DB75_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB75_HETAK)

HSP 1 Score: 150 bits (378), Expect = 3.190e-37
Identity = 68/157 (43.31%), Postives = 96/157 (61.15%), Query Frame = 2 
Query:  389 WTKEENDQLQEGMAALGGPNAECGRNEWNAIARDFLKDSRTGTQCATHWKMVLKPALLKGVWSQEEDSHICDCVARGVTDWSEVASFLPKRRAKHCRERWTNHLDPSISKAEWSSAEEVQLLSAVEAHGTNWTHIARLLPGRSESTIQEHWNAVVFR 859
            W K E+++L++G+ ALG P A      W  +A+++L   RT  QC   W+ V+ P L+KG W++EED+ I  C+  G+  WS++A  +P R  K  RERW NHLDP + K  WS  E+  L  A    G  WT IARLLPGRS+++I+ HWN+   R
Sbjct:   82 WKKSEDEKLRKGVEALG-PQA------WRRVAQEYLDGKRTDMQCLHRWQKVVHPGLVKGAWTKEEDAVIVACMESGIKKWSKIAERIPGRIGKQVRERWFNHLDPHLKKGGWSPEEDAVLAEAQARWGNAWTKIARLLPGRSDNSIKNHWNSSTVR 231
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BLAST of mRNA_D-dudresnayi_contig10235.279.1 vs. uniprot
Match: A0A5A8DBZ9_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DBZ9_CAFRO)

HSP 1 Score: 153 bits (387), Expect = 4.810e-37
Identity = 68/157 (43.31%), Postives = 97/157 (61.78%), Query Frame = 2 
Query:  389 WTKEENDQLQEGMAALGGPNAECGRNEWNAIARDFLKDSRTGTQCATHWKMVLKPALLKGVWSQEEDSHICDCVARGVTDWSEVASFLPKRRAKHCRERWTNHLDPSISKAEWSSAEEVQLLSAVEAHGTNWTHIARLLPGRSESTIQEHWNAVVFR 859
            W+ EE+  L++G+  LG  N       W  I+ ++L+  RT  QC   W+ VL+P L+KG W+ EED  I +C+  G+T WSE++  +P R  K CRERW NHLDPSI K  WS+ E+  L  A  + G  W  IA+LLPGRSE++++  WN+ + R
Sbjct:   11 WSDEEDGSLRQGVQTLGAKN-------WKRISEEYLQGRRTDVQCLHRWQKVLRPGLVKGPWTTEEDQVIVNCINAGITKWSEISERIPGRIGKQCRERWFNHLDPSIKKDPWSAEEDRILEEAQCSIGNKWCEIAKLLPGRSENSVKNRWNSAMRR 160
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BLAST of mRNA_D-dudresnayi_contig10235.279.1 vs. uniprot
Match: A0A7S0VPJ2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VPJ2_9CRYP)

HSP 1 Score: 143 bits (361), Expect = 6.440e-36
Identity = 74/183 (40.44%), Postives = 98/183 (53.55%), Query Frame = 2 
Query:  314 RGASNGAPGAATGYTTRGKMYNRRTWTKEENDQLQEGMAALGGPNAECGRNEWNAIARDFLKDSRTGTQCATHWKMVLKPALLKGVWSQEEDSHICDCVAR-GVTDWSEVASFLPKRRAKHCRERWTNHLDPSISKAEWSSAEEVQLLSAVEAHGTNWTHIARLLPGRSESTIQEHWNAVVFR 859
            RGA  G  G        G+  N R WT EE+++L   +    G +       W  +A +     RT  QC   W+ VL P L+KG W++EED  +   V R G T WS +ASFLP R  K CRERW NHL+P I K EWS  E+  ++ A   HG  W  IA  LPGR+++ I+ HWN+ + R
Sbjct:   17 RGARTGQGGGHRRMADVGEGKNSRKWTTEEDERLSLLVEKYQGKS-------WKKVAEELK--FRTDVQCLHRWQKVLNPELIKGPWTKEEDDTVVKLVHRHGPTKWSLIASFLPGRIGKQCRERWHNHLNPDIRKEEWSVEEDCTIIHATRVHGKKWARIANFLPGRTDNAIKNHWNSTMKR 190
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BLAST of mRNA_D-dudresnayi_contig10235.279.1 vs. uniprot
Match: A0A2R5G768_9STRA (Transcription factor MYB3R-4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G768_9STRA)

HSP 1 Score: 155 bits (391), Expect = 9.230e-36
Identity = 66/157 (42.04%), Postives = 98/157 (62.42%), Query Frame = 2 
Query:  389 WTKEENDQLQEGMAALGGPNAECGRNEWNAIARDFLKDSRTGTQCATHWKMVLKPALLKGVWSQEEDSHICDCVARGVTDWSEVASFLPKRRAKHCRERWTNHLDPSISKAEWSSAEEVQLLSAVEAHGTNWTHIARLLPGRSESTIQEHWNAVVFR 859
            WT+EE+ +L+EG+ A+G         +W  I+ ++L   R+  QC   W+ VL+P L+KG W++EED+ I  C+ R +T WSE+A  +P R  K CRERW NHLDP+I  + W+  EE  L++A    G  W  IA+LLPGR E+ ++  WN+ + R
Sbjct:  175 WTREEDAKLREGVTAIGA-------TKWKKISEEYLGGRRSDVQCLHRWQKVLRPGLVKGPWTEEEDNMIRACIERKITKWSEIAERIPGRIGKQCRERWFNHLDPTIDHSAWTEEEEKVLVTAQATFGNRWCEIAKLLPGRPENAVKNRWNSAIRR 324
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BLAST of mRNA_D-dudresnayi_contig10235.279.1 vs. uniprot
Match: A0A7S1DIT8_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DIT8_HEMAN)

HSP 1 Score: 143 bits (360), Expect = 2.470e-35
Identity = 71/172 (41.28%), Postives = 95/172 (55.23%), Query Frame = 2 
Query:  347 TGYTTRGKMYNRRTWTKEENDQLQEGMAALGGPNAECGRNEWNAIARDFLKDSRTGTQCATHWKMVLKPALLKGVWSQEEDSHICDCVAR-GVTDWSEVASFLPKRRAKHCRERWTNHLDPSISKAEWSSAEEVQLLSAVEAHGTNWTHIARLLPGRSESTIQEHWNAVVFR 859
            TG    G+  N R WT EE+++L   +    G +       W  +A +     RT  QC   W+ VL P L+KG W++EED  +   V R G T WS +ASFLP R  K CRERW NHL+P I K EWS  E+  ++ A   HG  W  IA  LPGR+++ I+ HWN+ + R
Sbjct:   18 TGMAEIGEGKNSRKWTTEEDERLSLLVEKYQGKS-------WKKVAEELK--FRTDVQCLHRWQKVLNPELIKGPWTKEEDDTVVKLVHRHGPTKWSLIASFLPGRIGKQCRERWHNHLNPDIRKEEWSVDEDCTIIHATRVHGKKWARIASFLPGRTDNAIKNHWNSTMKR 180
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BLAST of mRNA_D-dudresnayi_contig10235.279.1 vs. uniprot
Match: A0A7S3PK53_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PK53_9STRA)

HSP 1 Score: 149 bits (377), Expect = 7.280e-35
Identity = 68/165 (41.21%), Postives = 96/165 (58.18%), Query Frame = 2 
Query:  368 KMYNRRTWTKEENDQLQEGMAALGGPNAECGRNEWNAIARDFLKDSRTGTQCATHWKMVLKPALLKGVWSQEEDSHICDCVARGVTDWSEVASFLPKRRAKHCRERWTNHLDPSISKAEWSSAEEVQLLSAVEAHGTNWTHIARL-LPGRSESTIQEHWNAVVFR 859
            + Y+   WTK E+D L+  +  +G  N       W  +A +FL+++R+  QC   W+ VL+P L+KG W++EED  I  C   G+T WSE+A  +  R  K CRERW NHLDPSI K EW+  E+  L+      G  W+ IA+L LPGR E+ ++  WNA   R
Sbjct:  185 ESYSTGRWTKHEDDLLKLAVEKIGARN-------WKRVAAEFLENTRSDVQCLHRWQKVLRPGLVKGPWTKEEDETILRCRQNGITKWSEIARHVSGRIGKQCRERWFNHLDPSIRKCEWTEEEDRNLIEGQALLGNKWSQIAKLFLPGRPENAVKNRWNAATRR 342
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10235.279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKA8_ECTSI1.950e-21563.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZ10_9PHAE2.530e-15156.19MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S2RZ51_9STRA1.980e-4042.01Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2SVF3_9STRA3.950e-4042.94Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S4DB75_HETAK3.190e-3743.31Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5A8DBZ9_CAFRO4.810e-3743.31Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A7S0VPJ2_9CRYP6.440e-3640.44Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A2R5G768_9STRA9.230e-3642.04Transcription factor MYB3R-4 n=1 Tax=Hondaea ferme... [more]
A0A7S1DIT8_HEMAN2.470e-3541.28Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S3PK53_9STRA7.280e-3541.21Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10235contigD-dudresnayi_contig10235:4177..7180 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score630.9
Seed ortholog evalue6.3e-178
Seed eggNOG ortholog2880.D8LKA8
Preferred nameBAS1
KEGG koko:K09420,ko:K09422,ko:K09423,ko:K21769
KEGG Pathwayko04151,ko04218,ko05166,map04151,map04218,map05166
GOsGO:0000226,GO:0000278,GO:0000280,GO:0000976,GO:0000981,GO:0000988,GO:0000989,GO:0001046,GO:0001047,GO:0001067,GO:0001076,GO:0001134,GO:0001135,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0006357,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0030154,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043565,GO:0044085,GO:0044212,GO:0044424,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0048285,GO:0048518,GO:0048522,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051225,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070925,GO:0071840,GO:0080090,GO:0090307,GO:0097159,GO:0140014,GO:0140110,GO:1901363,GO:1902680,GO:1902850,GO:1903047,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141
EggNOG free text desc.RNA polymerase II transcription regulator recruiting activity
EggNOG OGsCOG5147@1,KOG0048@2759
COG Functional cat.ADK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Ec32 orthologEc-01_009570.1
Exons5
Model size1959
Cds size1926
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10235.279.1prot_D-dudresnayi_contig10235.279.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10235 4177..7149 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927524.4937735-CDS-D-dudresnayi_contig10235:4176..50091622927524.4937735-CDS-D-dudresnayi_contig10235:4176..5009Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10235 4177..5009 -
1690556791.8805509-CDS-D-dudresnayi_contig10235:4176..50091690556791.8805509-CDS-D-dudresnayi_contig10235:4176..5009Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10235 4177..5009 -
1622927524.5113008-CDS-D-dudresnayi_contig10235:5084..57421622927524.5113008-CDS-D-dudresnayi_contig10235:5084..5742Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10235 5085..5742 -
1690556791.8950858-CDS-D-dudresnayi_contig10235:5084..57421690556791.8950858-CDS-D-dudresnayi_contig10235:5084..5742Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10235 5085..5742 -
1622927524.5259733-CDS-D-dudresnayi_contig10235:6144..64831622927524.5259733-CDS-D-dudresnayi_contig10235:6144..6483Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10235 6145..6483 -
1690556791.910444-CDS-D-dudresnayi_contig10235:6144..64831690556791.910444-CDS-D-dudresnayi_contig10235:6144..6483Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10235 6145..6483 -
1622927524.5392065-CDS-D-dudresnayi_contig10235:6814..68561622927524.5392065-CDS-D-dudresnayi_contig10235:6814..6856Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10235 6815..6856 -
1690556791.9206135-CDS-D-dudresnayi_contig10235:6814..68561690556791.9206135-CDS-D-dudresnayi_contig10235:6814..6856Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10235 6815..6856 -
1622927524.5534174-CDS-D-dudresnayi_contig10235:7095..71491622927524.5534174-CDS-D-dudresnayi_contig10235:7095..7149Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10235 7096..7149 -
1690556791.9300742-CDS-D-dudresnayi_contig10235:7095..71491690556791.9300742-CDS-D-dudresnayi_contig10235:7095..7149Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10235 7096..7149 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927524.5672421-UTR-D-dudresnayi_contig10235:7149..71801622927524.5672421-UTR-D-dudresnayi_contig10235:7149..7180Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10235 7150..7180 -
1690556791.939672-UTR-D-dudresnayi_contig10235:7149..71801690556791.939672-UTR-D-dudresnayi_contig10235:7149..7180Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10235 7150..7180 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10235.279.1

>prot_D-dudresnayi_contig10235.279.1 ID=prot_D-dudresnayi_contig10235.279.1|Name=mRNA_D-dudresnayi_contig10235.279.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=642bp
MAMDMPPPSPRTEKRRLTGAAEDLEALASPSKRGTPTSRSFFSAGLDVSR
TPADVSWIREQAGTTPRALDRDFLEASPAAEVTGGGRIGGAGNTRGASNG
APGAATGYTTRGKMYNRRTWTKEENDQLQEGMAALGGPNAECGRNEWNAI
ARDFLKDSRTGTQCATHWKMVLKPALLKGVWSQEEDSHICDCVARGVTDW
SEVASFLPKRRAKHCRERWTNHLDPSISKAEWSSAEEVQLLSAVEAHGTN
WTHIARLLPGRSESTIQEHWNAVVFRNASSAGGVRRGRSRMADASATASG
ARGRVRASALPVETERHLSTGKNSGVVPTGVGGGQAEPAVILTERERALI
DHAYKTGLTAAGVGEPLALSMEEDDIFGPLTAALLKTGGSTSASCSPAKM
PPPSPTISPLKLTKQLHPDYTAIGDQLGDGWGVDDDPALADLYRSLDNIG
ESLFNEDTFELSFDFDSVDKPSPSCGGGVTQSNPSKDWENLLTRQERENS
PFRRAAAKAAANLEQRLSPAKRNVQKQRNLEEACARAAAAAAAAAQTAAS
ETIPPVTAQAAGPRVKQGFLRRLFSADTKPGKQLRAPFFTVRGCLSEANA
PPSPSPPPTLSLPARPTSPAGRRIGGENQAPRRVRQPLSIAL
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mRNA from alignment at D-dudresnayi_contig10235:4177..7180-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10235.279.1 ID=mRNA_D-dudresnayi_contig10235.279.1|Name=mRNA_D-dudresnayi_contig10235.279.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3004bp|location=Sequence derived from alignment at D-dudresnayi_contig10235:4177..7180- (Desmarestia dudresnayi DdudBR16 monoicous)
GTGGTTGTGTCTACAGCCGCCACAAGTAAGCATGGCCATGGATATGCCAC
CACCATCGCCTCGAACAGAGAAGCGTCGCTTGACGGTAAGTGAGAGTGAG
AGGGTGTGGAGGTTGGTGATGGATAGTGAAGAGTACAGTCATCGCAGTAC
GCCCACAACAACAGCAGTAGCAATACTCGTAGCCACTATCGTATCCCCAT
GATTGCTGCGATGCATGCTCCGCTCGCATTCTCGATGATTGTGTTGACAA
CTCTCTATAATTCTGGAATTCCCTCTCTAAGCGCTACTGTTTTACATTCT
GCTTGCGCTGGTTCACTTCATCAGGGCGCGGCAGAAGATCTGGAAGCCTT
GGCCTCACCCTCGAAGGTGAGGTGTGTATACGTACGATCCAAAAATACGC
AGTACTGGAATGTGCCAAAAATCACGAACAGACTCTCCGCATTGTACGGC
CAACCACCAAATCAAAGACTTCTTATACAGGCGCAGCCGCCTCTCTCAAT
TAACCAGCAGTGGATGCTCGTACAGCGTCGCGCTACGCTCCATTCTGGCC
GCAAACGCGCCGTACAGACAGTAGAGAAAACGAACCCTTGCGCTATTTCT
TGGAAGTTGAACCAACCCTCTGCACTTTTTGTTGCCTGTCGTGTTTCGCG
CCATATTTTCCCCTCGCATTGGTAACGACTGACTCCCCGCCATACAGAGA
GGTACGCCCACATCTCGCTCCTTCTTCTCGGCGGGACTAGACGTCTCTCG
TACACCCGCAGATGTCAGCTGGATTAGGGAGCAGGCCGGCACTACCCCTC
GCGCGTTGGACCGCGACTTTTTGGAGGCGAGTCCGGCCGCCGAGGTGACC
GGTGGCGGCAGAATTGGCGGCGCGGGAAACACTCGCGGCGCATCAAACGG
CGCACCGGGGGCGGCGACTGGTTATACGACCAGGGGCAAGATGTACAACA
GGAGAACGTGGACGAAAGAAGAGAACGATCAGCTACAGGAAGGCATGGCG
GCGTTGGGTGGTCCGAATGCCGAGTGTGGCAGAAATGTGAGTGTGGCGTT
GTTTACCAATATGGGGCAACGTGGGGTTTTGGCGAGTCGAGGGAAACAAC
GGTAGACGACAGCGCCCGATGATTCGTTCTTTCACCGTTACAAGAAGTAT
AGAAGGCGACGATACTTGTATAACAGCGATACATCCAGCGCTTTACATTT
ATTGAAGTGCGTGTATCCGTGGCTACTGTAATGTGAAAGACGCACAGCTA
CGAAGCACTCTGTACAGCTATGGACAATGTATCATGCCGCGAACTGAACA
GTGTGCCGGCTACTCGTATATTCCCACCTGTGTGGTAGCACCGTAGTGGC
AGCCACAAAAAAAAATTGTCGTAAAAGGTGATAAGTGCTGTACTTCGCAC
TATCCTTGCATTGTCCCGCCGTCGTGATACGCGAACAGGAATGGAACGCT
ATTGCTCGCGATTTTCTCAAGGACTCGCGAACGGGCACACAGTGCGCAAC
CCACTGGAAAATGGTCCTTAAACCCGCGCTGCTGAAGGGAGTCTGGTCTC
AAGAGGAAGACTCGCATATCTGCGACTGCGTCGCGCGCGGGGTCACCGAC
TGGTCCGAGGTTGCCTCCTTCCTCCCAAAACGGAGGGCCAAGCACTGCCG
TGAGCGCTGGACCAATCATCTCGACCCTTCCATCAGCAAGGCCGAATGGT
CGTCCGCGGAAGAGGTCCAGCTTCTTAGCGCTGTCGAAGCCCACGGCACA
AATTGGACCCACATCGCGCGACTCCTCCCAGGTCGTTCCGAGTCTACGAT
CCAGGAACACTGGAACGCGGTCGTCTTCCGCAACGCGTCCAGCGCGGGTG
GCGTCCGGCGCGGTCGGAGCAGGATGGCAGATGCGTCGGCGACGGCTAGT
GGCGCACGGGGAAGGGTAAGAGCGTCCGCGTTGCCTGTTGAAACTGAGCG
TCATCTGTCGACAGGGAAGAACAGCGGTGTAGTGCCGACCGGCGTGGGAG
GAGGGCAAGCGGAGCCGGCGGTGATCCTCACGGAGCGCGAGAGAGCCCTT
ATAGACCACGCGTACAAGACGGGCTTGACTGCGGCGGGGGTCGGCGGTGG
AACAGGAGGCGCAGTTGCGCCGCTGGCGCCGGTGACCTTGATTGGGACGA
CGCCAAAGGGTAGCGGGGAAGAGCCGCTAGCGTTGTCGATGGAAGAGGAC
GATATTTTTGGCCCGCTGACAGCGGCTCTGCTGAAGACCGGTGGCAGCAC
CAGCGCCAGCTGTAGTCCCGCCAAGATGCCGCCTCCATCGCCTACGATCT
CTCCATTGAAACTGACCAAGCAGCTGCATCCCGACTACACGGCGATCGGC
GACCAACTTGGAGACGGTTGGGGAGTAGACGACGACCCTGCACTGGCGGA
CCTCTACCGAAGCCTGGACAACATCGGCGAATCTCTCTTCAACGAGGACA
CCTTTGAGCTCAGCTTCGACTTCGACAGCGTGGACAAGCCTTCTCCTTCG
TGCGGTGGGGGCGTCACCCAGTCGAACCCCTCTAAGGACTGGGAGAACCT
GCTGACGCGGCAGGAAAGGGAAAATTCTCCGTTCCGTCGTGCCGCGGCTA
AGGCCGCCGCGAATCTTGAGCAACGGCTCTCCCCGGCCAAGCGCAACGTG
CAAAAGCAGCGGAACCTCGAGGAAGCGTGCGCGAGGGCGGCAGCGGCGGC
TGCTGCGGCAGCCCAGACGGCGGCATCGGAGACGATACCACCGGTGACGG
CACAAGCTGCCGGTCCCCGCGTGAAGCAGGGGTTCCTCCGACGGCTGTTT
TCCGCAGACACGAAGCCCGGAAAGCAGCTTCGCGCGCCGTTTTTCACCGT
GCGCGGCTGTCTGTCGGAAGCGAACGCGCCGCCATCGCCATCGCCGCCGC
CAACGTTGTCACTACCTGCGCGGCCGACGTCGCCTGCGGGACGGCGGATC
GGCGGAGAGAACCAAGCGCCGAGAAGGGTTCGTCAACCGCTCTCCATCGC
GCTC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10235:4177..7180-

>mRNA_D-dudresnayi_contig10235.279.1 ID=mRNA_D-dudresnayi_contig10235.279.1|Name=mRNA_D-dudresnayi_contig10235.279.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3852bp|location=Sequence derived from alignment at D-dudresnayi_contig10235:4177..7180- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGCCATGGATATGCCACCACCATCGCCTCGAACAGAGAAGCGTCGCTT
GACGATGGCCATGGATATGCCACCACCATCGCCTCGAACAGAGAAGCGTC
GCTTGACGGGCGCGGCAGAAGATCTGGAAGCCTTGGCCTCACCCTCGAAG
GGCGCGGCAGAAGATCTGGAAGCCTTGGCCTCACCCTCGAAGAGAGGTAC
GCCCACATCTCGCTCCTTCTTCTCGGCGGGACTAGACGTCTCTCGTACAC
CCGCAGATGTCAGCTGGATTAGGGAGCAGGCCGGCACTACCCCTCGCGCG
TTGGACCGCGACTTTTTGGAGGCGAGTCCGGCCGCCGAGGTGACCGGTGG
CGGCAGAATTGGCGGCGCGGGAAACACTCGCGGCGCATCAAACGGCGCAC
CGGGGGCGGCGACTGGTTATACGACCAGGGGCAAGATGTACAACAGGAGA
ACGTGGACGAAAGAAGAGAACGATCAGCTACAGGAAGGCATGGCGGCGTT
GGGTGGTCCGAATGCCGAGTGTGGCAGAAATAGAGGTACGCCCACATCTC
GCTCCTTCTTCTCGGCGGGACTAGACGTCTCTCGTACACCCGCAGATGTC
AGCTGGATTAGGGAGCAGGCCGGCACTACCCCTCGCGCGTTGGACCGCGA
CTTTTTGGAGGCGAGTCCGGCCGCCGAGGTGACCGGTGGCGGCAGAATTG
GCGGCGCGGGAAACACTCGCGGCGCATCAAACGGCGCACCGGGGGCGGCG
ACTGGTTATACGACCAGGGGCAAGATGTACAACAGGAGAACGTGGACGAA
AGAAGAGAACGATCAGCTACAGGAAGGCATGGCGGCGTTGGGTGGTCCGA
ATGCCGAGTGTGGCAGAAATGAATGGAACGCTATTGCTCGCGATTTTCTC
AAGGACTCGCGAACGGGCACACAGTGCGCAACCCACTGGAAAATGGTCCT
TAAACCCGCGCTGCTGAAGGGAGTCTGGTCTCAAGAGGAAGACTCGCATA
TCTGCGACTGCGTCGCGCGCGGGGTCACCGACTGGTCCGAGGTTGCCTCC
TTCCTCCCAAAACGGAGGGCCAAGCACTGCCGTGAGCGCTGGACCAATCA
TCTCGACCCTTCCATCAGCAAGGCCGAATGGTCGTCCGCGGAAGAGGTCC
AGCTTCTTAGCGCTGTCGAAGCCCACGGCACAAATTGGACCCACATCGCG
CGACTCCTCCCAGGTCGTTCCGAGTCTACGATCCAGGAACACTGGAACGC
GGTCGTCTTCCGCAACGCGTCCAGCGCGGGTGGCGTCCGGCGCGGTCGGA
GCAGGATGGCAGATGCGTCGGCGACGGCTAGTGGCGCACGGGGAAGGGTA
AGAGCGTCCGCGTTGCCTGTTGAAACTGAGCGTCATCTGTCGACAGGGAA
GAACAGCGGTGTAGTGCCGACCGGCGTGGGAGGAGGGCAAGCGGAGCCGG
CGGTGATCCTCACGGAGCGCGAGAGAGCCCTTATAGACCACGCGTACAAG
ACGGGCTTGACTGCGGCGGGGGTCGGCGGAATGGAACGCTATTGCTCGCG
ATTTTCTCAAGGACTCGCGAACGGGCACACAGTGCGCAACCCACTGGAAA
ATGGTCCTTAAACCCGCGCTGCTGAAGGGAGTCTGGTCTCAAGAGGAAGA
CTCGCATATCTGCGACTGCGTCGCGCGCGGGGTCACCGACTGGTCCGAGG
TTGCCTCCTTCCTCCCAAAACGGAGGGCCAAGCACTGCCGTGAGCGCTGG
ACCAATCATCTCGACCCTTCCATCAGCAAGGCCGAATGGTCGTCCGCGGA
AGAGGTCCAGCTTCTTAGCGCTGTCGAAGCCCACGGCACAAATTGGACCC
ACATCGCGCGACTCCTCCCAGGTCGTTCCGAGTCTACGATCCAGGAACAC
TGGAACGCGGTCGTCTTCCGCAACGCGTCCAGCGCGGGTGGCGTCCGGCG
CGGTCGGAGCAGGATGGCAGATGCGTCGGCGACGGCTAGTGGCGCACGGG
GAAGGGTAAGAGCGTCCGCGTTGCCTGTTGAAACTGAGCGTCATCTGTCG
ACAGGGAAGAACAGCGGTGTAGTGCCGACCGGCGTGGGAGGAGGGCAAGC
GGAGCCGGCGGTGATCCTCACGGAGCGCGAGAGAGCCCTTATAGACCACG
CGTACAAGACGGGCTTGACTGCGGCGGGGGTCGGCGAGCCGCTAGCGTTG
TCGATGGAAGAGGACGATATTTTTGGCCCGCTGACAGCGGCTCTGCTGAA
GACCGGTGGCAGCACCAGCGCCAGCTGTAGTCCCGCCAAGATGCCGCCTC
CATCGCCTACGATCTCTCCATTGAAACTGACCAAGCAGCTGCATCCCGAC
TACACGGCGATCGGCGACCAACTTGGAGACGGTTGGGGAGTAGACGACGA
CCCTGCACTGGCGGACCTCTACCGAAGCCTGGACAACATCGGCGAATCTC
TCTTCAACGAGGACACCTTTGAGCTCAGCTTCGACTTCGACAGCGTGGAC
AAGCCTTCTCCTTCGTGCGGTGGGGGCGTCACCCAGTCGAACCCCTCTAA
GGACTGGGAGAACCTGCTGACGCGGCAGGAAAGGGAAAATTCTCCGTTCC
GTCGTGCCGCGGCTAAGGCCGCCGCGAATCTTGAGCAACGGCTCTCCCCG
GCCAAGCGCAACGTGCAAAAGCAGCGGAACCTCGAGGAAGCGTGCGCGAG
GGCGGCAGCGGCGGCTGCTGCGGCAGCCCAGACGGCGGCATCGGAGACGA
TACCACCGGTGACGGCACAAGCTGCCGGTCCCCGCGTGAAGCAGGGGTTC
CTCCGACGGCTGTTTTCCGCAGACACGAAGCCCGGAAAGCAGCTTCGCGC
GCCGTTTTTCACCGTGCGCGGCTGTCTGTCGGAAGCGAACGCGCCGCCAT
CGCCATCGCCGCCGCCAACGTTGTCACTACCTGCGCGGCCGACGTCGCCT
GCGGGACGGCGGATCGGCGGAGAGAACCAAGCGCCGAGAAGGGTTCGTCA
ACCGCTCTCCATCGCGCTCAGCCGCTAGCGTTGTCGATGGAAGAGGACGA
TATTTTTGGCCCGCTGACAGCGGCTCTGCTGAAGACCGGTGGCAGCACCA
GCGCCAGCTGTAGTCCCGCCAAGATGCCGCCTCCATCGCCTACGATCTCT
CCATTGAAACTGACCAAGCAGCTGCATCCCGACTACACGGCGATCGGCGA
CCAACTTGGAGACGGTTGGGGAGTAGACGACGACCCTGCACTGGCGGACC
TCTACCGAAGCCTGGACAACATCGGCGAATCTCTCTTCAACGAGGACACC
TTTGAGCTCAGCTTCGACTTCGACAGCGTGGACAAGCCTTCTCCTTCGTG
CGGTGGGGGCGTCACCCAGTCGAACCCCTCTAAGGACTGGGAGAACCTGC
TGACGCGGCAGGAAAGGGAAAATTCTCCGTTCCGTCGTGCCGCGGCTAAG
GCCGCCGCGAATCTTGAGCAACGGCTCTCCCCGGCCAAGCGCAACGTGCA
AAAGCAGCGGAACCTCGAGGAAGCGTGCGCGAGGGCGGCAGCGGCGGCTG
CTGCGGCAGCCCAGACGGCGGCATCGGAGACGATACCACCGGTGACGGCA
CAAGCTGCCGGTCCCCGCGTGAAGCAGGGGTTCCTCCGACGGCTGTTTTC
CGCAGACACGAAGCCCGGAAAGCAGCTTCGCGCGCCGTTTTTCACCGTGC
GCGGCTGTCTGTCGGAAGCGAACGCGCCGCCATCGCCATCGCCGCCGCCA
ACGTTGTCACTACCTGCGCGGCCGACGTCGCCTGCGGGACGGCGGATCGG
CGGAGAGAACCAAGCGCCGAGAAGGGTTCGTCAACCGCTCTCCATCGCGC
TC
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