mRNA_D-dudresnayi_contig1023.272.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig1023.272.1 vs. uniprot
Match: A0A835YZL3_9STRA (Proteasome maturation factor UMP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZL3_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.350e-26 Identity = 51/123 (41.46%), Postives = 78/123 (63.41%), Query Frame = 1 Query: 1 LPVYSGAVDHLRYGFRSLENEFSAQHPIQNLQKSANSSAWASKLDMVRRTHGSHMAMRLATEKETFSRIRRLPGLESSNIALQTLMGNAESVDFPDFLNDVVSRPEAPRLELHSQMEVKFGIL 369 LPV D LRYG S++ E HP++ +Q+S + K+DM +R +GS AMRL TE S+ +RLPGL SS + L+T++GN E++DF DF+ ++P P+ ++H ME+K+G+L Sbjct: 6 LPVARQPADILRYGLTSMQQEAQDTHPVEAIQRSRVRGEFELKMDMAQRVYGSGFAMRLRTEAAALSQAQRLPGLLSSRVGLETVLGNDETLDFEDFMGTPENQPGEPKFKVHEAMEIKYGLL 128
BLAST of mRNA_D-dudresnayi_contig1023.272.1 vs. uniprot
Match: A0A482SDR4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDR4_9ARCH) HSP 1 Score: 103 bits (256), Expect = 1.940e-25 Identity = 54/101 (53.47%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 1 LPVYSGAVDHLRYGFRSLENEFSAQ--HPIQNLQKSANSSAWASKLDMVRRTHGSHMAMRLATEKETFSRIRRLPGLESSNIALQTLMGNAESVDFPDFLN 297 LP+ +G VDHLR GF+ L+ E +A HP++ Q+ A+ +KLDM+RRT+G+HMAMRLATE+ ++R RRLPGLESS+IA+ TL ++DF DFLN Sbjct: 6 LPILTGPVDHLRQGFQGLQLEAAATAPHPVEQAQRRGEF-AYNNKLDMIRRTYGTHMAMRLATEQMVYNRDRRLPGLESSHIAVDTLANTDATIDFKDFLN 105
BLAST of mRNA_D-dudresnayi_contig1023.272.1 vs. uniprot
Match: D7FKB2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB2_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 7.500e-23 Identity = 44/123 (35.77%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 1 LPVYSGAVDHLRYGFRSLENEFSAQHPIQNLQKSANSSAWASKLDMVRRTHGSHMAMRLATEKETFSRIRRLPGLESSNIALQTLMGNAESVDFPDFLNDVVSRPEAPRLELHSQMEVKFGIL 369 +P+ D +R+GF S + SA HP++ + K+ + + K+D+ + +GS MR+ TE T S+ + LPGL SS + L+T++G E+V+F D+L+ RPE PR +H ME+++G++ Sbjct: 9 MPMARAPHDQMRFGFSSFAQDASAGHPLEAMNKARIPNEFDFKMDLAGKVYGSAFVMRMKTEVATLSQAQHLPGLPSSMLGLETVLGRDETVEFEDYLDPPADRPEGPRFRVHEAMEIQYGLM 131
BLAST of mRNA_D-dudresnayi_contig1023.272.1 vs. uniprot
Match: W7TNF3_9STRA (Proteasome maturation factor ump1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNF3_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.740e-21 Identity = 46/124 (37.10%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 1 LPVYSGAVDHLRYGFRS--LENEFSAQHPIQNLQKSANSSAWASKLDMVRRTHGSHMAMRLATEKETFSRIRRLPGLESSNIALQTLMGNAESVDFPDFLNDVVSRPEAPRLELHSQMEVKFGI 366 LP+ VD +R G ++ +E A HP+Q Q + + + ++LD + R +G AMRL TE++ SR+ R PGL SS + L+T++G E+++F D LND RP+ P + +H +ME + G+ Sbjct: 9 LPLLKEPVDQMREGLKAGGFRSEAVAPHPVQAFQATRKEAEFQARLDTIARLYGIAAAMRLKTERDILSRVCRAPGLPSSMVGLETVLGTDETIEFEDVLNDPQERPDMPLIPVHERMEARLGL 132
BLAST of mRNA_D-dudresnayi_contig1023.272.1 vs. uniprot
Match: A0A1X2GZ51_SYNRA (Proteasome maturation factor UMP1-domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2GZ51_SYNRA) HSP 1 Score: 88.2 bits (217), Expect = 2.090e-19 Identity = 48/117 (41.03%), Postives = 70/117 (59.83%), Query Frame = 1 Query: 16 GAVDHLRYGFRSLENEFSAQHPIQNLQKSANSSAWASKLDMVRRTHGSHMAMRLATEKETFSRIRRLPGLESSNIALQTLMGNAESVDFPDFLNDVVSRPEAPRLELHSQMEVKFGI 366 G D LRYG RS++ E HPIQ+ + + S W KL+M RR G H ++L+ E++ S+ +R+P L SSN+ L LMG E++DF DFLND + L++H+ ME K + Sbjct: 27 GGHDALRYGTRSIKTEVLPGHPIQSRVEDWHESQWELKLNMARRAQGLHAPIKLSMERDIVSKRQRMPVLPSSNLHLDILMGQDETIDFEDFLNDPAMSTDM--LDVHAAMEKKLNL 141
BLAST of mRNA_D-dudresnayi_contig1023.272.1 vs. uniprot
Match: A0A7R9YBV5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBV5_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 4.190e-19 Identity = 50/123 (40.65%), Postives = 65/123 (52.85%), Query Frame = 1 Query: 1 LPVYSGAVDHLRYGFRSLENEFSAQHPIQNLQKSANSSAWASKLDMVRRTHGSHMAMRLATEKETFSRIRRLPGLESSNIALQTLMGNAESVDFPDFLNDVVSRPEAPRLELHSQMEVKFGIL 369 LPV D LR G +HP++ Q + + K+ VR HG AM L E S+ RLPGL SSN+AL TL+ N E + F D L RP+AP+ +LHS ME+KFG+L Sbjct: 8 LPVLKEPRDTLRLGLGVAAERTRTKHPVEEFQMNGITRQLDEKIKTVRMLHGIGAAMDLKAEIVACSQPTRLPGLPSSNVALDTLLNNDEKIRFEDVLGREEDRPDAPKFKLHSAMEIKFGML 130
BLAST of mRNA_D-dudresnayi_contig1023.272.1 vs. uniprot
Match: A0A024ULP6_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024ULP6_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.240e-18 Identity = 46/122 (37.70%), Postives = 64/122 (52.46%), Query Frame = 1 Query: 1 LPVYSGAVDHLRYGFRSLENEFSAQHPIQNLQKSANSSAWASKLDMVRRTHGSHMAMRLATEKETFSRIRRLPGLESSNIALQTLMGNAESVDFPDFLNDVVSRPEAPRLELHSQMEVKFGI 366 LP+ D +R GF+ + H +Q L+ + K+ V + +G AMRL TEK + RLPGL SS L T++GN +++DF D LND PEAP+ +H MEVK I Sbjct: 6 LPLLRAGPDLMRVGFQRASEDTRPVHEVQRLETHRRLRGFEGKMRSVEQIYGKAAAMRLRTEKILLEQHTRLPGLPSSRCGLDTVLGNDDTLDFTDILNDPQDSPEAPQFRVHDVMEVKLAI 127
BLAST of mRNA_D-dudresnayi_contig1023.272.1 vs. uniprot
Match: A0A7S2S4B2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4B2_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.690e-17 Identity = 49/123 (39.84%), Postives = 72/123 (58.54%), Query Frame = 1 Query: 1 LPVYSGAVDHLRYGFRS-LENEFSAQHPIQNLQKSANSSAWASKLDMVRRTHGSHMAMRLATEKETFSRIRRLPGLESSNIALQTLMGNAESVDFPDFLNDVVSRPEAPRLELHSQMEVKFGI 366 +PV G D +R G ++ L E HP++ + ++ K+DMVRR +GS AMRL TE+ +I+RLPGL SS +ALQT++G ++ F D LND P + LH ++E KFG+ Sbjct: 7 IPVLQGPRDQMREGLQTTLAAESRQGHPLETRLAVDD---FSQKVDMVRRMYGSAAAMRLQTERLATEQIQRLPGLPSSFLALQTVLGEDCTLQFEDVLNDPFEAPVETKASLHDELEFKFGL 126
BLAST of mRNA_D-dudresnayi_contig1023.272.1 vs. uniprot
Match: A0A1V9YHV6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YHV6_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 2.730e-16 Identity = 45/122 (36.89%), Postives = 66/122 (54.10%), Query Frame = 1 Query: 1 LPVYSGAVDHLRYGFRSLENEFSAQHPIQNLQKSANSSAWASKLDMVRRTHGSHMAMRLATEKETFSRIRRLPGLESSNIALQTLMGNAESVDFPDFLNDVVSRPEAPRLELHSQMEVKFGI 366 LP+ D LR G++S + A H +Q L+ + K++ V + +G AMRL TEK + R+PGL SS++ L T++GN + +DF D LN+ PEA +H MEVK I Sbjct: 6 LPLLRAGPDVLRVGWQSAAQDSRAVHEVQRLEMHQRLRGFEGKMNTVEQIYGKAAAMRLRTEKILLEQHVRMPGLPSSHVGLDTILGNDDVIDFTDVLNEPSENPEAT-FRVHDAMEVKLAI 126
BLAST of mRNA_D-dudresnayi_contig1023.272.1 vs. uniprot
Match: A0A067CYH8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CYH8_SAPPC) HSP 1 Score: 79.3 bits (194), Expect = 3.850e-16 Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 1 Query: 1 LPVYSGAVDHLRYGFRSLENEFSAQHPIQNLQKSANSSAWASKLDMVRRTHGSHMAMRLATEKETFSRIRRLPGLESSNIALQTLMGNAESVDFPDFLNDVVSRPEAPRLELHSQMEVKFGI 366 LP+ D LR G++ + + H +Q L+ + +K++ V + +G AMRL TEK + RLPGL SS + L TLMGN +++DF D LN+ PE +H MEVK I Sbjct: 6 LPLLRAGPDVLRVGWQRADQDARPVHEVQRLEMHRRVHGFEAKMNSVEQIYGKAAAMRLRTEKIMLEQHVRLPGLPSSRVGLDTLMGNDDTLDFADILNEPQENPEV-HFRVHDAMEVKLAI 126 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1023.272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig1023.272.1 >prot_D-dudresnayi_contig1023.272.1 ID=prot_D-dudresnayi_contig1023.272.1|Name=mRNA_D-dudresnayi_contig1023.272.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=79bp MVRRTHGSHMAMRLATEKETFSRIRRLPGLESSNIALQTLMGNAESVDFPback to top mRNA from alignment at D-dudresnayi_contig1023:22320..22857- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig1023.272.1 ID=mRNA_D-dudresnayi_contig1023.272.1|Name=mRNA_D-dudresnayi_contig1023.272.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=538bp|location=Sequence derived from alignment at D-dudresnayi_contig1023:22320..22857- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig1023:22320..22857- >mRNA_D-dudresnayi_contig1023.272.1 ID=mRNA_D-dudresnayi_contig1023.272.1|Name=mRNA_D-dudresnayi_contig1023.272.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=474bp|location=Sequence derived from alignment at D-dudresnayi_contig1023:22320..22857- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |