mRNA_D-dudresnayi_contig1022.256.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_D-dudresnayi_contig1022.256.1
Unique Name	mRNA_D-dudresnayi_contig1022.256.1
Type	mRNA
Organism	Desmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)

Homology

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BLAST of mRNA_D-dudresnayi_contig1022.256.1 vs. uniprot
Match: A0A6H5JCR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR2_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 2.250e-30
Identity = 127/492 (25.81%), Postives = 200/492 (40.65%), Query Frame = 1

Query:  352 IVVVFPDDPSVQALIELTAKYTATDGEAFEKVIKAREENNPQFRFLFDLESPEGQYYRWRTYANVWAATTTTNSQQQWPTPAVQWSIRGRTLAPPPCSGSSSSTIPQPVDGLTNHKSENKRSRSRSSERVKEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDRRSDRRDRDDDREHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRYLGMTGAQIEREKAKRRLEEQARLRRDDYIEWKFKLANLDLSRESIKTAMGFAYDKVESAEEIISMTKDILIIPSSYAAVKLAGLFLLSDILHNSAAPVKQASSYRQLIQNILPEVVADLSRLYHKTTGRMTAFNIEDRMKKLFAAWAEWSVFPTTYLLGLQATFHFSEVECSALVEYVVRKQEEEELDGVSIVATTGEGEGQHQQEVNELESLRKKAKLSGIPHTDKTTIHELHYRLEHLQRFVQYQYGGSGGVTS 1827
            I V  P +   + +++ TA+Y A DG+ FE+ +  RE  NP F FLF+ ES EGQYYRW+ ++ V       + + +W T   Q +  G    PP           +P+   ++              R KE                                                                                                     +RY   TG ++E  KA+ + +    L   D+  +   L  L  SR  +K AMGFA D  +++ +++ + K+ L++P +   VK+A L+LLSDILHNS+APVK+ASSYR  +Q  LPE+   L+  +    GRMTA  +EDR+  L AAW  WS++P  Y+ GL+A+F     +  A           ++L GV             ++   + E+L +KA  +GI HT+  +  +L  RL +L  + + +     G T+
Sbjct:  494 IEVEIPAEKERRYMVDRTARYVAKDGQPFEQRLLDREAGNPDFAFLFEYESKEGQYYRWKVFSLVMG-----DREDRWVTRPYQMTPNGPWWVPPE----------EPLTSSSDXXXXXXXXXXXXXXRKKEA--------------------------------------------------------------------------------------------------LANRYKYQTGRELE--KAREQDKGAEELSDKDFDAFSALLRGLTNSRAKVKEAMGFALDHADASADVVGVLKESLLVPETPIHVKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDRIMALLAAWDNWSIYPPLYITGLEASFMRKSGDLEA-----------KDLTGV-------------EESSLDKEALAQKANQAGI-HTEGLSALDLLKRLNYLNEYAKRKAARKAGGTA 845

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BLAST of mRNA_D-dudresnayi_contig1022.256.1 vs. uniprot
Match: A0A7S2WJ81_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJ81_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.790e-30
Identity = 98/274 (35.77%), Postives = 152/274 (55.47%), Query Frame = 1

Query: 1048 RSRYLGMTGAQIEREKAKRRLEEQAR-----LRRDDYIEWKFKLANLDLSRESIKTAMGFAYDKVESAEEIISMTKDILIIPSSYAAVKLAGLFLLSDILHNSAAPVKQASSYRQLIQNILPEVVADLSRLYH--KTTGRMTAFNIEDRMKKLFAAWAEWSVFPTTYLLGLQATFHFSEVECSALVEYVVRKQEEEELDGVSIVATTGEGEGQHQQEVNELESLRKKAKLSGIPHTDKT-TIHELHYRLEHLQRFVQYQYGGSGGVTSISALLT 1845
            + RY   TGAQ+E+    R  E+ AR     L   +Y E + +L  L  SR++IK AMGFA D  E+++E++ + K+ L++  +  +VKLA L+LLSDILHNS+APV+ AS+YR L+Q  LP++   L+R++   +  GRM+A ++E+++  L   W +WS++P TY+ GL+ATF   E    AL         E  L  V   A+             +LE L++KAK +G+   D   T   L  +L  L  +V+ +  G  G  + +A  T
Sbjct:  499 KERYKFATGAQLEKA---REQEQGARGGGGSLANHEYDELQDRLQTLSTSRQTIKEAMGFALDHAEASQEVVKLLKESLLLGETPISVKLARLYLLSDILHNSSAPVQHASTYRTLLQACLPQIFEHLNRIFRDVERLGRMSARSLEEKVLALLGVWEQWSLYPPTYITGLEATF---ERRAGAL---------EAGLQDVDPKASL------------DLEDLKRKAKHTGVFFDDSNDTAAHLLVKLNLLNEYVRAKASGLAGTAAATASAT 745

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BLAST of mRNA_D-dudresnayi_contig1022.256.1 vs. uniprot
Match: A0A7S2WJA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJA8_9STRA)

HSP 1 Score: 133 bits (335), Expect = 9.510e-29
Identity = 74/175 (42.29%), Postives = 116/175 (66.29%), Query Frame = 1

Query: 1048 RSRYLGMTGAQIEREKAKRRLEEQAR-----LRRDDYIEWKFKLANLDLSRESIKTAMGFAYDKVESAEEIISMTKDILIIPSSYAAVKLAGLFLLSDILHNSAAPVKQASSYRQLIQNILPEVVADLSRLYH--KTTGRMTAFNIEDRMKKLFAAWAEWSVFPTTYLLGLQATF 1551
            + RY   TGAQ+E+    R  E+ AR     L   +Y E + +L  L  SR++IK AMGFA D  E+++E++ + K+ L++  +  +VKLA L+LLSDILHNS+APV+ AS+YR L+Q  LP++   L+R++   +  GRM+A ++E+++  L   W +WS++P TY+ GL+ATF
Sbjct:  499 KERYKFATGAQLEKA---REQEQGARGGGGSLANHEYDELQDRLQTLSTSRQTIKEAMGFALDHAEASQEVVKLLKESLLLGETPISVKLARLYLLSDILHNSSAPVQHASTYRTLLQACLPQIFEHLNRIFRDVERLGRMSARSLEEKVLALLGVWEQWSLYPPTYITGLEATF 670

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BLAST of mRNA_D-dudresnayi_contig1022.256.1 vs. uniprot
Match: A0A388JW30_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JW30_CHABU)

HSP 1 Score: 125 bits (315), Expect = 4.960e-26
Identity = 110/405 (27.16%), Postives = 159/405 (39.26%), Query Frame = 1

Query:  340 HVPDIVVVFPDDPSVQALIELTAKYTATDGEAFEKVIKAREENNPQFRFLFDLESPEGQYYRWRTYANVWAATTTTNSQQQWPT-PAVQWSIRGRTLAPPPCSGSSSSTIPQPVDGLTNHKSENKRSRSRSSERVKEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDRRSDRRDRDDDREHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRYLGMTGAQIEREKAKRRLEEQARLRRDDYIEWKFKLANLDLSRESIKTAMGFAYDKVESAEEIISMTKDILIIPSSYAAVKLAGLFLLSDILHNSAAPVKQASSYRQLIQNILPEVVADLSRLYHKTTGRMTAFNIEDRMKKLFAAWAEWSVFPTTYLLGLQATF 1551
            ++PD+ VV P D  ++ +I+  A Y   DG AFE+ I  R +NNP F++LFDL SPE  YYRWR Y+     T      Q+W T P +  +   R + PPP     S   PQP +    +                                                                                                                     RSR   +T AQ                 RD++ +    L  L L R  I+ AMGFA D  E+A E++ +  + L +  +    K+A L L+SDILHNS+APVK AS+YR   +  LP+++   + LY   TGRMTA  +++R+ K+   WA+W +F  +Y+ GL+ATF
Sbjct:  325 NIPDVEVVPPADEHIRHVIDTMAIYVLDDGCAFEQAIMERGKNNPVFKYLFDLSSPEHIYYRWRLYSFAQGDTL-----QRWRTEPFIMVTGHARWV-PPPLPKQES---PQPEEPAVTY------------------------------------------------------------------------------------------------------------------AGGRSRERSLTDAQ-----------------RDEFEDM---LRALTLERSQIRDAMGFALDNAEAALEVVEVVTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRSGFEAKLPDIMESFNELYRNITGRMTAEALKERVLKVLQVWADWFLFSESYVSGLRATF 586

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BLAST of mRNA_D-dudresnayi_contig1022.256.1 vs. uniprot
Match: A0A7R9U2C3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2C3_9STRA)

HSP 1 Score: 124 bits (311), Expect = 6.480e-26
Identity = 154/546 (28.21%), Postives = 241/546 (44.14%), Query Frame = 1

Query:  358 VVFPDDPSVQALIELTAKYTATDGEAFEKVIKAREENNPQFRFLFDLESPEGQYYRWRTYANVWAATTTTNSQQQWPTPAVQWSIRGRTLAPPPCSGSSSSTIPQPVDGLTNHKSENKRSRSRSSERVKEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDRRSDRRDRDDDREHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRYLGMTGAQIEREKAKRRLEEQARLRRDDYIEWKFKLANLDLSRESIKTAMGFAYDKVESAEEIISMTKDILIIPSSYAA-----------------VKLAGLFLLSDILHNSAAPVKQASSYRQLIQNILPEVVADLSRLYHKTTGRMTAFNIEDRMKKLFAAWAEWSVFPTTYLLGLQATFHFSEV-ECSALVEYVVRKQEEEELDGVSIVATTGEGEGQHQQEVNELESLRKKAKLSGIPHTDKTTIHELHYRLEHLQRFVQYQYGGSGGVTSISALLTPTEYVNNVTNYDTNQEE--EEDIDGIPIESVS 1935
            V  P D   + LI LTAKY ATDG+AFE  I++RE+ NP+FRFLFD +SPEG YY WR      A+    +++ +W T   Q    G  L PPP              GL N   E + +  +   R                                                                                 XXXXXXXXXXXXXXXXXX    +S     TGAQ+E  K++R+ E+  RLR +D  + +  L +L LSR+ IK  MGF  DK E+ E II    +  + P +                    + L+ L+L+SDIL+NS+APVK +  +R+ +++ LP ++ +++  + K   R+TA  ++ +++ L   W  WS++  +Y+ GLQ +F    + +   +V+ V    EE  +   +  A+TG+   Q      E E +R+KA+  G+   +  +  E+  R+E ++++               A       +N    +D+  ++  +ED+DG P+E  S
Sbjct:  150 VQIPFDGEARTLINLTAKYVATDGKAFEDAIRSREQGNPRFRFLFDHKSPEGMYYAWRV-----ASYALGDTEYKWRTTPFQIVRNGLFLRPPPIE-----------KGLENTDVELREAMEKDRRRQ--------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXRELVKSDSKIKTGAQLE--KSRRKAEK--RLRSEDLSKLRRLLESLTLSRQKIKEVMGFCLDKAEAGEHIIGEVFNEFVEPPAEGVEGRREVSSLPRKELTPNMLLSRLYLVSDILYNSSAPVKNSWRFRENLESYLPRMM-EVTGEFVKNASRLTADGLKSKIEALLNVWNRWSLYSASYMTGLQYSFLAEGMGDVPDVVKDVEETSEERGIGQEAGRASTGD---QPMPAAEEDEQVRRKARRLGVRCDNALSTSEVKRRVEAVKKYA---------AAIEEARRARLREINPDITFDSENDDASDEDLDGAPVEDDS 582

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BLAST of mRNA_D-dudresnayi_contig1022.256.1 vs. uniprot
Match: A0A7S3UX26_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX26_HETAK)

HSP 1 Score: 122 bits (307), Expect = 1.200e-25
Identity = 89/256 (34.77%), Postives = 141/256 (55.08%), Query Frame = 1

Query: 1054 RYLGMTGAQIE--REKAKRRLEEQARLRRDDYIEWKFKLANLDLSRESIKTAMGFAYDKVESAEEIISMTKDILIIPSSYAAVKLAGLFLLSDILHNSAAPVKQASSYRQLIQNILPEV--VADLSRLYHKTTGRMTAFNIEDRMKKLFAAWAEWSVFPTTYLLGLQATFHFSEVECSALVEYVVRKQEEEELDGVSIVATTGEGEGQHQQEVNELESLRKKAKLSGIPHTDKTTIHELHYRLEHLQRFVQYQYGG 1809
            RY  MTG Q+E  REK + R  + A L  D+Y +    L  L  SR  IK AMGFA D  +++EE++ +  + L + ++ A VK+A L LLSDILHNS+APV+ A+SYR  +Q+ LP+V     L+R   +  GRM+A + E ++ ++   W  WS++P  ++ GL+ATF                ++ +E+LD         + EG  + +++    L KKAK +G+  TD      L  +L HL ++++ +  G
Sbjct:  309 RYKYMTGRQLEKAREKERGRAAKTA-LTDDEYDQLSDMLRGLTNSRRKIKEAMGFALDHADASEEVVQLLAESLGLKATPAPVKVARLHLLSDILHNSSAPVRHAASYRTRLQDALPQVFDALRLAREAEEAKGRMSAQSFESKVMRVLGVWEGWSLYPPLFISGLEATF----------------RRRQEDLD-------RAKPEGVAEADLDRP-GLEKKAKQAGLHFTDADGALLLLQKLTHLNKYIKAKAAG 539

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BLAST of mRNA_D-dudresnayi_contig1022.256.1 vs. uniprot
Match: A0A3M6VV00_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VV00_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.760e-25
Identity = 86/241 (35.68%), Postives = 128/241 (53.11%), Query Frame = 1

Query: 1066 MTGAQIEREKAKRRLEEQARLRRDDYIEWKFKLANLDLSRESIKTAMGFAYDKVESAEEIISMTKDILIIPSSYAAVKLAGLFLLSDILHNSAAPVKQASSYRQLIQNILPEVVADLSRLYHKTTGRMTAFNIEDRMKKLFAAWAEWSVFPTTYLLGLQATFHFSEVECSALVEYVVRKQEEEELDGVSIVATTGEGEGQHQQEVNELESLRKKAKLSGIPHTDKTTIHELHYRLEHLQRF 1788
            +TG QI R +   R  E+ RL  +DY ++K  L  L L RES+K  MGFA DK E+A +++++  +     +S     +  L++ SDILHNS+A VK AS +R + Q  LPE++  L  ++    GRM+A  +++++  + +AW  WS+FP   LLGL A+F              +RK EE+E    S     G GE       ++LE LRK  + SGI  T       L  RL+ L+ F
Sbjct:  565 LTGQQIARARDMERGRERNRLSGEDYDDFKELLGKLTLERESVKETMGFALDKSEAAVDLVNIILESFKSSNSSGVTLIGLLYVTSDILHNSSAAVKNASLFRTMFQECLPEIMDTLRVVHKNIVGRMSANAMKEKVMNVLSAWGNWSLFPPAVLLGLHASF--------------LRKVEEDEYMASSKFRIDGIGE-------SDLERLRKTCRQSGIMATGDAK--RLVARLQWLKEF 782

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BLAST of mRNA_D-dudresnayi_contig1022.256.1 vs. uniprot
Match: A0A6A4L8K4_9ERIC (Uncharacterized protein (Fragment) n=2 Tax=Rhododendron TaxID=4346 RepID=A0A6A4L8K4_9ERIC)

HSP 1 Score: 117 bits (294), Expect = 1.560e-23
Identity = 62/150 (41.33%), Postives = 93/150 (62.00%), Query Frame = 1

Query: 1102 RRLEEQARLRRDDYIEWKFKLANLDLSRESIKTAMGFAYDKVESAEEIISMTKDILIIPSSYAAVKLAGLFLLSDILHNSAAPVKQASSYRQLIQNILPEVVADLSRLYHKTTGRMTAFNIEDRMKKLFAAWAEWSVFPTTYLLGLQATF 1551
            RR+E++  L      E++  L +L L R  IK AMGFA D  ++A EI+ +  + L +  +    K+A L L+SDILHNS+APVK AS+YR   +  LP+++   + LY   TGRMTA  +++R+ K+  AW +W +F   Y+ GL+ATF
Sbjct:  441 RRVEQERTLTEPQRDEFEDMLRSLTLERSQIKEAMGFALDNADAAGEIVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIIESFNDLYRSITGRMTAEALKERVLKVLHAWTDWFLFSDAYMNGLRATF 590

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BLAST of mRNA_D-dudresnayi_contig1022.256.1 vs. uniprot
Match: A0A438JHY7_VITVI (Protein RRC1 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JHY7_VITVI)

HSP 1 Score: 112 bits (280), Expect = 2.800e-23
Identity = 56/130 (43.08%), Postives = 83/130 (63.85%), Query Frame = 1

Query: 1162 LANLDLSRESIKTAMGFAYDKVESAEEIISMTKDILIIPSSYAAVKLAGLFLLSDILHNSAAPVKQASSYRQLIQNILPEVVADLSRLYHKTTGRMTAFNIEDRMKKLFAAWAEWSVFPTTYLLGLQATF 1551
            L  L L R  IK AMGFA D  ++A EI+ +  + L +  +    K+A L L+SDILHNS+APVK AS+YR  ++  LP+++   + LY   TGR+TA  +++R+ K+   WA+W +F   Y+ GL+ATF
Sbjct:  115 LCALALERSQIKEAMGFALDNADAAGEIVEVLTESLTLKETPMPTKVARLMLVSDILHNSSAPVKNASAYRTKLEATLPDIMKSFNDLYRNITGRITAEALKERVMKVLQVWADWFLFSDAYVNGLRATF 244

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BLAST of mRNA_D-dudresnayi_contig1022.256.1 vs. uniprot
Match: A0A6P6U1M1_COFAR (protein RRC1-like n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6U1M1_COFAR)

HSP 1 Score: 111 bits (278), Expect = 2.830e-23
Identity = 60/150 (40.00%), Postives = 91/150 (60.67%), Query Frame = 1

Query: 1102 RRLEEQARLRRDDYIEWKFKLANLDLSRESIKTAMGFAYDKVESAEEIISMTKDILIIPSSYAAVKLAGLFLLSDILHNSAAPVKQASSYRQLIQNILPEVVADLSRLYHKTTGRMTAFNIEDRMKKLFAAWAEWSVFPTTYLLGLQATF 1551
            RR+E +  L      E++  L  L L R  IK AMGFA D  ++A E++ +  + L +  +    K+A L L+SDILHNS+APVK AS+YR   +  LP+++   + LY   TGR+TA  +++R+ K+   WA+W +F   Y+ GL+ATF
Sbjct:   35 RRVEVERTLTDAQRDEFEDMLRALTLERSQIKEAMGFALDNADAAGEVVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESFNDLYRSVTGRITAEALKERVLKVLQVWADWFLFSDAYVNGLRATF 184

The following BLAST results are available for this feature:

BLAST of mRNA_D-dudresnayi_contig1022.256.1 vs. uniprot

BLAST of mRNA_D-dudresnayi_contig1022.256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JCR2_9PHAE	2.250e-30	25.81	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S2WJ81_9STRA	2.790e-30	35.77	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2WJA8_9STRA	9.510e-29	42.29	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A388JW30_CHABU	4.960e-26	27.16	Uncharacterized protein n=1 Tax=Chara braunii TaxI...	[more]
A0A7R9U2C3_9STRA	6.480e-26	28.21	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
A0A7S3UX26_HETAK	1.200e-25	34.77	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A3M6VV00_9STRA	3.760e-25	35.68	Uncharacterized protein n=2 Tax=Peronospora effusa...	[more]
A0A6A4L8K4_9ERIC	1.560e-23	41.33	Uncharacterized protein (Fragment) n=2 Tax=Rhodode...	[more]
A0A438JHY7_VITVI	2.800e-23	43.08	Protein RRC1 n=2 Tax=Vitis vinifera TaxID=29760 Re...	[more]
A0A6P6U1M1_COFAR	2.830e-23	40.00	protein RRC1-like n=1 Tax=Coffea arabica TaxID=134...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dudresnayi_contig1022	contig	D-dudresnayi_contig1022:14545..18156 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	123.6
Seed ortholog evalue	3.5e-25
Seed eggNOG ortholog	272952.HpaP812956
Preferred name	U2SURP
KEGG ko	ko:K02878,ko:K12842
KEGG Pathway	ko03010,ko03040,map03010,map03040
KEGG Module	M00178
GOs	GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005685,GO:0005686,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0017069,GO:0030532,GO:0030619,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0035613,GO:0035614,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.	Suppressor-of-White-APricot splicing regulator
EggNOG OGs	3QCDQ@4776,KOG0151@1,KOG0151@2759
COG Functional cat.	A
Best tax level	Peronosporales
Best eggNOG OG	NA\|NA\|NA
BRITE	br01610,ko00000,ko00001,ko00002,ko03011,ko03041
Hectar predicted targeting category	other localisation
Exons	8
Model size	2104
Cds size	2064
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dudresnayi_contig1022.256.1	prot_D-dudresnayi_contig1022.256.1	Desmarestia dudresnayi DdudBR16 monoicous	polypeptide	D-dudresnayi_contig1022 14558..18129 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927520.8637025-UTR-D-dudresnayi_contig1022:14544..14557	1622927520.8637025-UTR-D-dudresnayi_contig1022:14544..14557	Desmarestia dudresnayi DdudBR16 monoicous	UTR	D-dudresnayi_contig1022 14545..14557 -
1690556790.8955271-UTR-D-dudresnayi_contig1022:14544..14557	1690556790.8955271-UTR-D-dudresnayi_contig1022:14544..14557	Desmarestia dudresnayi DdudBR16 monoicous	UTR	D-dudresnayi_contig1022 14545..14557 -
1622927520.9603136-UTR-D-dudresnayi_contig1022:18129..18156	1622927520.9603136-UTR-D-dudresnayi_contig1022:18129..18156	Desmarestia dudresnayi DdudBR16 monoicous	UTR	D-dudresnayi_contig1022 18130..18156 -
1690556791.0089066-UTR-D-dudresnayi_contig1022:18129..18156	1690556791.0089066-UTR-D-dudresnayi_contig1022:18129..18156	Desmarestia dudresnayi DdudBR16 monoicous	UTR	D-dudresnayi_contig1022 18130..18156 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at D-dudresnayi_contig1022:14545..18156-
coding sequence from alignment at D-dudresnayi_contig1022:14545..18156-

protein sequence of mRNA_D-dudresnayi_contig1022.256.1

>prot_D-dudresnayi_contig1022.256.1 ID=prot_D-dudresnayi_contig1022.256.1|Name=mRNA_D-dudresnayi_contig1022.256.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=688bp
MSVDSFLDSIITAGSKPVTGSSATIITTTTTTDPSSKPISDSSSLPVPVD
HLTGTIDSETSLPSSATATTTATPLFAKPPTIPLPDTATNTTASTTATTT
DTAGHVPDIVVVFPDDPSVQALIELTAKYTATDGEAFEKVIKAREENNPQ
FRFLFDLESPEGQYYRWRTYANVWAATTTTNSQQQWPTPAVQWSIRGRTL
APPPCSGSSSSTIPQPVDGLTNHKSENKRSRSRSSERVKEGDTTHENRSR
MRSDSSVSMSTDRDAKRSRRSRSRSPGNQSRDRDYDRRSDRRDRDDDREH
DRDRDRGTDRRDRDYDRDRGADRRYRGSDRDRDRERDREDRSRYLGMTGA
QIEREKAKRRLEEQARLRRDDYIEWKFKLANLDLSRESIKTAMGFAYDKV
ESAEEIISMTKDILIIPSSYAAVKLAGLFLLSDILHNSAAPVKQASSYRQ
LIQNILPEVVADLSRLYHKTTGRMTAFNIEDRMKKLFAAWAEWSVFPTTY
LLGLQATFHFSEVECSALVEYVVRKQEEEELDGVSIVATTGEGEGQHQQE
VNELESLRKKAKLSGIPHTDKTTIHELHYRLEHLQRFVQYQYGGSGGVTS
ISALLTPTEYVNNVTNYDTNQEEEEDIDGIPIESVSEKMTQLERLIQSES
DNIVHNSDDDDDIDGVPIDLSEYTIPVSSQPPPSYIP*

mRNA from alignment at D-dudresnayi_contig1022:14545..18156-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_D-dudresnayi_contig1022.256.1 ID=mRNA_D-dudresnayi_contig1022.256.1|Name=mRNA_D-dudresnayi_contig1022.256.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3612bp|location=Sequence derived from alignment at D-dudresnayi_contig1022:14545..18156- (Desmarestia dudresnayi DdudBR16 monoicous)
CAGCCAGCACCAGAAGACTTCTCTCAAATGTCTGTGGATTCCTTCCTAGA
CTCTATTATCACTGCTGGAAGTAAACCAGTCACTGGTAGCAGTGCTACTA
TCATTACTACTACTACTACTACTGACCCAAGTAGCAAGCCTATCTCTGAC
AGCTCTTCTCTCCCTGTCCCAGTCGATCATCTCACTGGAACAATTGATTC
AGAAACGTCTCTTCCCTCTAGTGCTACCGCTACTACAACTGCTACTCCAC
TATTTGCCAAGCCTCCAACTATACCCCTACCAGACACAGCTACTAATACT
ACTGCTAGTACAACTGCCACTACTACGGATACTGCTGGACATGTACCGGA
TATTGTCGTGGTGTTCCCTGATGATCCCAGTGTACAGGCACTGATTGAGC
TCACCGCCAAGTACACTGCAACTGATGGCGAGGCCTTCGAGAAGGTATGT
ACTATTATACAGTGTAGTGTGTATGTAGTATTCCTACTACAGTTATTACC
TATATTTTACTGATATAGGAGCATTATATTATATGGTTGATGTTATTCAA
TATGTAGTTTATATAATACAGTATATTCTCTATATATCCCTCTCTAACTT
CCTGGGTTTAATTGTCCTCCCCACTGGGTTATATAGGTGATCAAGGCGAG
GGAGGAAAATAACCCACAGTTCCGCTTCCTGTTCGACCTGGAGAGCCCGG
AGGGACAGTACTACCGTTGGAGGACATACGGTATGTTCTATACTATATTG
CTACTATATATTATTAGTATTTTCATTTTATATACTGTACATAAATTATT
GTAGTGTATATAACTAAACATCTATTTTTCTCTCAAATATATATATATAT
ATATATATCTTATAGCCAATGTATGGGCCGCCACTACTACTACTAATAGT
CAACAGCAGTGGCCCACTCCGGCAGTGCAGTGGTCGATCCGTGGCCGCAC
CCTTGCCCCACCTCCTTGCAGCGGTAGTAGTAGTAGCACTATACCGCAGC
CAGTGGATGGGCTAACTAACCACAAGAGTGAGAATAAAAGGTTAGCATAC
ATGTACTGTACTACAACACTATACTTACGTACTCCTTTATATGCATATAC
TATATACATGCATTTTTACTTAAGTTACATGAGATATATGATGTTTTAGC
GGAGGGTTTTATTATTTATATGCTTATAAAATTCCATTAAATCCCAATCT
GAATAATGGGTTTATTTGCTGCTTTAGATCGCGCTCCAGGTCCTCCGAGA
GGGTAAAAGAGGGAGATACTACTCATGAGAATAGAAGTCGAATGAGATCA
GATAGCAGTGTTAGTATGAGTACTGATAGAGATGCGAAGCGTTCTCGTCG
TAGTCGCAGTCGTAGCCCAGGAAATCAATCGAGAGACCGAGATTATGATC
GAAGATCCGATCGGAGAGACCGAGATGACGACCGAGAGCATGATCGAGAC
CGGGACCGAGGAACCGATCGACGTGACCGAGATTATGACCGAGACCGAGG
AGCTGATCGTAGATACCGAGGATCTGACCGAGATCGCGACCGAGAGCGTG
ACCGAGAAGACCGGAGTCGCTATCTTGGTATGACCGGGGCTCAAATCGAG
CGTGAGAAAGCGAAACGGCGCCTGGAAGAGCAAGCGCGTCTCCGCAGGGA
TGACTATATTGAGTGGAAGTTCAAGCTAGCGAATTTAGATTTATCAAGAG
AGTCAATCAAGACTGCGATGGGCTTTGCATATGATAAAGTCGAGTCTGCG
GAAGAGGTAGGTACTAACTAGTCTTTATTCTTTATATAGTGTGTATATTG
TATTGTGTATTATTTGTATATTTCTGTGTATATGTACTTATTGTATGAAT
TTCTTTTTATATTTTAATATATAATTCTATTATCACTCCTATGACTCTAA
CCCCTGTTCCTACCACCCCTACTCCTACTATTACTGTAGATAATCTCTAT
GACCAAGGACATCCTTATCATACCCTCAAGCTACGCCGCAGTCAAGTTGG
CCGGACTCTTCCTGCTGTCCGACATCCTGCACAACTCCGCAGCCCCGGTT
AAGCAGGCCTCCTCCTACCGGTATGACTAATGTTTACTGCTTCTGTTTTT
GTATCTATTACTGTTTCTAAATCTACCAGTACTACCACCACCCCCCTATT
AACACACTACTACTACCACCACTACCACTACTATCACTATTACTACCTAC
TACTACCACTACCACTACTACTATTACTACCTACTACTACCACTATTACT
ACCTACTACTACCACTACTACTAGTACTACAACTGTCGATATCTGTAACC
ACTATATAGCAATTTTGATAATACTGCTTTATGTACTATCTCATGTATAA
ACCTCGGGCTCTATCTTTATCTATAATATAGTAACTCATGCATTATACGC
CTATGTATACTAACTATGTATGGTTGTATGTATGTCCTATTAATGTATAG
ACAACTGATCCAGAATATCCTCCCGGAGGTGGTCGCCGACTTGTCCCGTT
TGTATCATAAAACTACCGGCAGGATGACTGCTTTCAATGTGAGTTACAGT
GGAACTGCTGTATTATGATAGTAGTAGTAATATTAGTGGTAGAAATAGTA
GTAGTGGTGGTGGTAGTATTGGTATTTCTAATATGTATGATAATTTGTAT
TATGTTTGTTTTATTATAATACATACATAAAATCATACAACTATAGCTAA
TACTACTTCTACTACCGTACCCCTCCCTCTACTATTACTGATACTCTAGA
TTGAAGACCGCATGAAGAAGCTATTTGCTGCCTGGGCAGAGTGGTCCGTC
TTCCCCACTACTTATCTCCTCGGTCTGCAGGCCACCTTCCACTTTAGCGA
GGTAGAGTGTAGTGCACTAGTTGAGTACGTCGTACGGAAGCAAGAGGAGG
AGGAGTTGGATGGGGTGAGTATAGTAGCTACTACTGGAGAAGGAGAGGGA
CAGCATCAACAAGGTTAGTAGTAGTATGTATTATGGTTTATTTTTCAAGA
TTTATACATAGTACGTGCATATACTCTATTTATTACGTATTTATTCCAGT
ATGATTATTTTACTTACTATATTCTTATTGATACTATTATTATAATTATT
ATAATAATTTTACTGTACTATACTGTACAATACACTATACTATACTGTTT
TATATTAATATTATACACTATACTATACTATAGAAGTAAACGAGCTGGAA
TCCCTCCGGAAGAAAGCCAAGCTCTCAGGGATTCCACACACTGACAAGAC
AACGATTCATGAGTTACACTACCGTTTAGAGCATCTTCAACGCTTTGTAC
AGTATCAATATGGTGGAAGCGGAGGTGTTACTTCTATTTCAGCGTTACTT
ACCCCTACTGAATATGTTAATAATGTCACTAATTATGATACAAACCAAGA
AGAGGAGGAAGATATTGATGGTATACCAATAGAGAGTGTATCAGAGAAGA
TGACACAGTTAGAGAGGTTAATACAGTCTGAAAGTGACAATATAGTACAT
AATAGTGATGATGATGACGATATTGATGGTGTACCAATAGATCTATCGGA
ATATACTATACCGGTATCTAGTCAACCTCCACCTTCCTATATACCCTAAT
GCTTATATCTCG

Coding sequence (CDS) from alignment at D-dudresnayi_contig1022:14545..18156-

>mRNA_D-dudresnayi_contig1022.256.1 ID=mRNA_D-dudresnayi_contig1022.256.1|Name=mRNA_D-dudresnayi_contig1022.256.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=4128bp|location=Sequence derived from alignment at D-dudresnayi_contig1022:14545..18156- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTCTGTGGATTCCTTCCTAGACTCTATTATCACTGCTGGAAGTAAACC
AGTCACTGGTAGCAGTGCTACTATCATTACTACTACTACTACTACTGACC
CAAGTAGCAAGCCTATCTCTGACAGCTCTTCTCTCCCTGTCCCAGTCGAT
CATCTCACTGGAACAATTGATTCAGAAACGTCTCTTCCCTCTAGTGCTAC
CGCTACTACAACTGCTACTCCACTATTTGCCAAGCCTCCAACTATACCCC
TACCAGACACAGCTACTAATACTACTGCTAGTACAACTGCCACTACTACG
GATACTGCTGGACATGTACCGGATATTGTCGTGGTGTTCCCTGATGATCC
CAGTGTACAGGCACTGATTGAGCTCACCGCCAAGTACACTGCAACTGATG
GCGAGGCCTTCGAGAAGATGTCTGTGGATTCCTTCCTAGACTCTATTATC
ACTGCTGGAAGTAAACCAGTCACTGGTAGCAGTGCTACTATCATTACTAC
TACTACTACTACTGACCCAAGTAGCAAGCCTATCTCTGACAGCTCTTCTC
TCCCTGTCCCAGTCGATCATCTCACTGGAACAATTGATTCAGAAACGTCT
CTTCCCTCTAGTGCTACCGCTACTACAACTGCTACTCCACTATTTGCCAA
GCCTCCAACTATACCCCTACCAGACACAGCTACTAATACTACTGCTAGTA
CAACTGCCACTACTACGGATACTGCTGGACATGTACCGGATATTGTCGTG
GTGTTCCCTGATGATCCCAGTGTACAGGCACTGATTGAGCTCACCGCCAA
GTACACTGCAACTGATGGCGAGGCCTTCGAGAAGGTGATCAAGGCGAGGG
AGGAAAATAACCCACAGTTCCGCTTCCTGTTCGACCTGGAGAGCCCGGAG
GGACAGTACTACCGTTGGAGGACATACGGTGATCAAGGCGAGGGAGGAAA
ATAACCCACAGTTCCGCTTCCTGTTCGACCTGGAGAGCCCGGAGGGACAG
TACTACCGTTGGAGGACATACGCCAATGTATGGGCCGCCACTACTACTAC
TAATAGTCAACAGCAGTGGCCCACTCCGGCAGTGCAGTGGTCGATCCGTG
GCCGCACCCTTGCCCCACCTCCTTGCAGCGGTAGTAGTAGTAGCACTATA
CCGCAGCCAGTGGATGGGCTAACTAACCACAAGAGTGAGAATAAAAGCCA
ATGTATGGGCCGCCACTACTACTACTAATAGTCAACAGCAGTGGCCCACT
CCGGCAGTGCAGTGGTCGATCCGTGGCCGCACCCTTGCCCCACCTCCTTG
CAGCGGTAGTAGTAGTAGCACTATACCGCAGCCAGTGGATGGGCTAACTA
ACCACAAGAGTGAGAATAAAAGATCGCGCTCCAGGTCCTCCGAGAGGGTA
AAAGAGGGAGATACTACTCATGAGAATAGAAGTCGAATGAGATCAGATAG
CAGTGTTAGTATGAGTACTGATAGAGATGCGAAGCGTTCTCGTCGTAGTC
GCAGTCGTAGCCCAGGAAATCAATCGAGAGACCGAGATTATGATCGAAGA
TCCGATCGGAGAGACCGAGATGACGACCGAGAGCATGATCGAGACCGGGA
CCGAGGAACCGATCGACGTGACCGAGATTATGACCGAGACCGAGGAGCTG
ATCGTAGATACCGAGGATCTGACCGAGATCGCGACCGAGAGCGTGACCGA
GAAGACCGGAGTCGCTATCTTGGTATGACCGGGGCTCAAATCGAGCGTGA
GAAAGCGAAACGGCGCCTGGAAGAGCAAGCGCGTCTCCGCAGGGATGACT
ATATTGAGTGGAAGTTCAAGCTAGCGAATTTAGATTTATCAAGAGAGTCA
ATCAAGACTGCGATGGGCTTTGCATATGATAAAGTCGAGTCTGCGGAAGA
GATCGCGCTCCAGGTCCTCCGAGAGGGTAAAAGAGGGAGATACTACTCAT
GAGAATAGAAGTCGAATGAGATCAGATAGCAGTGTTAGTATGAGTACTGA
TAGAGATGCGAAGCGTTCTCGTCGTAGTCGCAGTCGTAGCCCAGGAAATC
AATCGAGAGACCGAGATTATGATCGAAGATCCGATCGGAGAGACCGAGAT
GACGACCGAGAGCATGATCGAGACCGGGACCGAGGAACCGATCGACGTGA
CCGAGATTATGACCGAGACCGAGGAGCTGATCGTAGATACCGAGGATCTG
ACCGAGATCGCGACCGAGAGCGTGACCGAGAAGACCGGAGTCGCTATCTT
GGTATGACCGGGGCTCAAATCGAGCGTGAGAAAGCGAAACGGCGCCTGGA
AGAGCAAGCGCGTCTCCGCAGGGATGACTATATTGAGTGGAAGTTCAAGC
TAGCGAATTTAGATTTATCAAGAGAGTCAATCAAGACTGCGATGGGCTTT
GCATATGATAAAGTCGAGTCTGCGGAAGAGATAATCTCTATGACCAAGGA
CATCCTTATCATACCCTCAAGCTACGCCGCAGTCAAGTTGGCCGGACTCT
TCCTGCTGTCCGACATCCTGCACAACTCCGCAGCCCCGGTTAAGCAGGCC
TCCTCCTACCGATAATCTCTATGACCAAGGACATCCTTATCATACCCTCA
AGCTACGCCGCAGTCAAGTTGGCCGGACTCTTCCTGCTGTCCGACATCCT
GCACAACTCCGCAGCCCCGGTTAAGCAGGCCTCCTCCTACCGACAACTGA
TCCAGAATATCCTCCCGGAGGTGGTCGCCGACTTGTCCCGTTTGTATCAT
AAAACTACCGGCAGGATGACTGCTTTCAATACAACTGATCCAGAATATCC
TCCCGGAGGTGGTCGCCGACTTGTCCCGTTTGTATCATAAAACTACCGGC
AGGATGACTGCTTTCAATATTGAAGACCGCATGAAGAAGCTATTTGCTGC
CTGGGCAGAGTGGTCCGTCTTCCCCACTACTTATCTCCTCGGTCTGCAGG
CCACCTTCCACTTTAGCGAGGTAGAGTGTAGTGCACTAGTTGAGTACGTC
GTACGGAAGCAAGAGGAGGAGGAGTTGGATGGGGTGAGTATAGTAGCTAC
TACTGGAGAAGGAGAGGGACAGCATCAACAAGATTGAAGACCGCATGAAG
AAGCTATTTGCTGCCTGGGCAGAGTGGTCCGTCTTCCCCACTACTTATCT
CCTCGGTCTGCAGGCCACCTTCCACTTTAGCGAGGTAGAGTGTAGTGCAC
TAGTTGAGTACGTCGTACGGAAGCAAGAGGAGGAGGAGTTGGATGGGGTG
AGTATAGTAGCTACTACTGGAGAAGGAGAGGGACAGCATCAACAAGAAGT
AAACGAGCTGGAATCCCTCCGGAAGAAAGCCAAGCTCTCAGGGATTCCAC
ACACTGACAAGACAACGATTCATGAGTTACACTACCGTTTAGAGCATCTT
CAACGCTTTGTACAGTATCAATATGGTGGAAGCGGAGGTGTTACTTCTAT
TTCAGCGTTACTTACCCCTACTGAATATGTTAATAATGTCACTAATTATG
ATACAAACCAAGAAGAGGAGGAAGATATTGATGGTATACCAATAGAGAGT
GTATCAGAGAAGATGACACAGTTAGAGAGGTTAATACAGTCTGAAAGTGA
CAATATAGTACATAATAGTGATGATGATGACGATATTGATGGTGTACCAA
TAGATCTATCGGAATATACTATACCGGTATCTAGTCAACCTCCACCTTCC
TATATACCCTAAAAGTAAACGAGCTGGAATCCCTCCGGAAGAAAGCCAAG
CTCTCAGGGATTCCACACACTGACAAGACAACGATTCATGAGTTACACTA
CCGTTTAGAGCATCTTCAACGCTTTGTACAGTATCAATATGGTGGAAGCG
GAGGTGTTACTTCTATTTCAGCGTTACTTACCCCTACTGAATATGTTAAT
AATGTCACTAATTATGATACAAACCAAGAAGAGGAGGAAGATATTGATGG
TATACCAATAGAGAGTGTATCAGAGAAGATGACACAGTTAGAGAGGTTAA
TACAGTCTGAAAGTGACAATATAGTACATAATAGTGATGATGATGACGAT
ATTGATGGTGTACCAATAGATCTATCGGAATATACTATACCGGTATCTAG
TCAACCTCCACCTTCCTATATACCCTAA