prot_D-dudresnayi_contig10147.196.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10147.196.1
Unique Nameprot_D-dudresnayi_contig10147.196.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length144
Homology
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A8F0JZV9_9PHAE (Ribosomal protein L13 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZV9_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 1.770e-92
Identity = 133/143 (93.01%), Postives = 139/143 (97.20%), Query Frame = 0
Query:    1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 143
            MKDTFIPSKLELKQ WY+IDAE+KCLGRLAT+VA LLTGKNKSIFTPAQD+GDCIII NADKINVTGKKRTQKLYFRHSGRPGGKTIE FEDLQ+RIPERI+EKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL
Sbjct:    1 MKDTFIPSKLELKQQWYIIDAEDKCLGRLATKVANLLTGKNKSIFTPAQDIGDCIIITNADKINVTGKKRTQKLYFRHSGRPGGKTIETFEDLQLRIPERIVEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 143          
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A0R6ME26_UNDPI (50S ribosomal protein L13, chloroplastic n=27 Tax=Laminariales TaxID=2886 RepID=A0A0R6ME26_UNDPI)

HSP 1 Score: 253 bits (645), Expect = 1.500e-84
Identity = 122/143 (85.31%), Postives = 135/143 (94.41%), Query Frame = 0
Query:    1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 143
            MKDTFIPSKL+LKQ WY+IDA++KCLGRLAT+V+ LL GKNKSIFTP+QDVGD III+NA +INV+GKKR QKLYFRHSGRPGGKT+E+FEDLQ+RIPERILEKAIKGMLPKNRLGRKLFTKLKVYKG EHPHMSQKPQ IEL
Sbjct:    1 MKDTFIPSKLDLKQQWYIIDAKDKCLGRLATEVSNLLRGKNKSIFTPSQDVGDYIIIVNASQINVSGKKRVQKLYFRHSGRPGGKTVESFEDLQIRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGEEHPHMSQKPQKIEL 143          
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A7T8G5D9_SCYLO (50S ribosomal protein L13, chloroplastic n=5 Tax=Ectocarpales TaxID=2877 RepID=A0A7T8G5D9_SCYLO)

HSP 1 Score: 251 bits (641), Expect = 6.120e-84
Identity = 118/143 (82.52%), Postives = 136/143 (95.10%), Query Frame = 0
Query:    1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 143
            MKDTF+PSKL LKQ WY+IDA++KCLGRLAT+V+ LL GKNK+IFTPAQD+GD IIIINA+KINVTGKKR+QK+YFRHSGRPGGKT+ENFE+LQ+R+PERI+EKA+KGMLPKNRLGRKLFTKLKVYKG EHPHMSQKP+ IEL
Sbjct:    1 MKDTFVPSKLNLKQQWYIIDAKDKCLGRLATEVSNLLRGKNKTIFTPAQDIGDYIIIINANKINVTGKKRSQKIYFRHSGRPGGKTVENFEELQLRLPERIIEKAVKGMLPKNRLGRKLFTKLKVYKGEEHPHMSQKPKNIEL 143          
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A8F0F9Q3_9PHAE (Ribosomal protein L13 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9Q3_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 1.010e-82
Identity = 120/143 (83.92%), Postives = 134/143 (93.71%), Query Frame = 0
Query:    1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 143
            MKDTFIPS+L LKQ WY+IDA+NKCLGRLAT+V+TLL GK K+IFTP+QDVGD IIIINA+KINVTGKK+ +K+YFRHSGRPGGKTIE FEDLQ+RIPERILEKA++GMLPKNRLGRKLFTKLKVYKG EHPHMSQKPQ IEL
Sbjct:    1 MKDTFIPSQLNLKQQWYLIDAQNKCLGRLATEVSTLLRGKKKAIFTPSQDVGDYIIIINANKINVTGKKQNKKIYFRHSGRPGGKTIETFEDLQLRIPERILEKAVRGMLPKNRLGRKLFTKLKVYKGQEHPHMSQKPQKIEL 143          
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A1I9LVW0_9PHAE (50S ribosomal protein L13, chloroplastic n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A1I9LVW0_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 2.030e-80
Identity = 115/143 (80.42%), Postives = 133/143 (93.01%), Query Frame = 0
Query:    1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 143
            MK+TF+PSKL+LKQ WY+IDA++KCLGRL+TQV+ LL GKNK+IFTP+QD+GD IIIINA+KI V+GKKR QK+YFRHSGRPGGKTIENFEDLQ R+PERI+EKAIKGMLPKN LGRKLFTKLKVYKG EHPHM+QKP+ IEL
Sbjct:    1 MKETFVPSKLDLKQHWYIIDAKDKCLGRLSTQVSNLLRGKNKTIFTPSQDIGDYIIIINANKIKVSGKKRLQKIYFRHSGRPGGKTIENFEDLQSRLPERIIEKAIKGMLPKNHLGRKLFTKLKVYKGKEHPHMAQKPKNIEL 143          
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: D1GJR0_FUCVE (50S ribosomal protein L13, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJR0_FUCVE)

HSP 1 Score: 236 bits (602), Expect = 5.400e-78
Identity = 114/143 (79.72%), Postives = 129/143 (90.21%), Query Frame = 0
Query:    1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 143
            MKDTFIPSK +LK+ WY+ DA++KCLGRLAT+V+ LL GK K+IFTPAQDVGD IIIINADK+ V+GKKR QK+YFRHSGRPGGK IENFE +Q+RIPERILEKAIKGMLPKNRLGR+LFT LKVYKG EHPH+SQKPQ IEL
Sbjct:    1 MKDTFIPSKCDLKKQWYIADAKDKCLGRLATEVSNLLRGKGKTIFTPAQDVGDYIIIINADKVFVSGKKRIQKMYFRHSGRPGGKKIENFESIQIRIPERILEKAIKGMLPKNRLGRQLFTNLKVYKGSEHPHISQKPQIIEL 143          
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A6B9TNL2_SARFS (50S ribosomal protein L13, chloroplastic n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A6B9TNL2_SARFS)

HSP 1 Score: 227 bits (578), Expect = 2.540e-74
Identity = 110/143 (76.92%), Postives = 126/143 (88.11%), Query Frame = 0
Query:    1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 143
            MKDTFIPSK  LK+ WY+IDA+NKCLGRLAT+++ LL GK K IFTP Q++GD IIIINA+KI V+GKKRTQK+YFRHSG PGGKTIE FEDLQ+RIPERILEKAIKGMLPKNRLGRK F  L+VYKG +HPH+SQKPQ I+L
Sbjct:    1 MKDTFIPSKQNLKKQWYIIDAKNKCLGRLATEISILLRGKKKVIFTPTQNLGDSIIIINAEKIFVSGKKRTQKVYFRHSGSPGGKTIETFEDLQMRIPERILEKAIKGMLPKNRLGRKFFKNLRVYKGSKHPHVSQKPQIIKL 143          
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A8F0F7E0_9PHAE (Ribosomal protein L13 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7E0_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 4.800e-73
Identity = 107/141 (75.89%), Postives = 126/141 (89.36%), Query Frame = 0
Query:    1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTI 141
            MKDTFIP+KL +KQ WY+IDA+++CLGRLAT+V+ LL GK K +FTP+QDVGD I+IINADKINV+GKK  QKLYFRHSGRPGGKTIE+FE L++R+PERI+EKAIKGMLPKNRLGRKLFTKLKVY G EHPH+SQ P  +
Sbjct:    1 MKDTFIPTKLRVKQKWYIIDAKDQCLGRLATRVSNLLRGKKKILFTPSQDVGDYIVIINADKINVSGKKFIQKLYFRHSGRPGGKTIESFEKLKLRLPERIIEKAIKGMLPKNRLGRKLFTKLKVYTGTEHPHLSQDPTIL 141          
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A2I4Q2L0_9PHAE (50S ribosomal protein L13, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2L0_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 1.480e-69
Identity = 104/147 (70.75%), Postives = 123/147 (83.67%), Query Frame = 0
Query:    1 MKDTFIPSKLEL----KQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 143
            MK+TFIPS+  L    K+ WY++DA+NKCLGR+AT++  LL GKNK  FTP+Q++GD IIIINA+++ VTG K TQK YFRHSGRPGG+TIENFE LQ R+PER+ EKAIKGMLPKNRLGRKLFTKLKVY GP HPH +QKPQ IEL
Sbjct:    1 MKNTFIPSQTILHPGRKEKWYIVDAKNKCLGRVATKITNLLRGKNKITFTPSQNIGDYIIIINAEQVKVTGNKFTQKTYFRHSGRPGGQTIENFETLQSRLPERVFEKAIKGMLPKNRLGRKLFTKLKVYSGPNHPHSAQKPQFIEL 147          
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A8E5FBC5_9PHAE (Ribosomal protein L13 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5FBC5_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 1.450e-66
Identity = 99/143 (69.23%), Postives = 119/143 (83.22%), Query Frame = 0
Query:    1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 143
            MKDTF P K   KQ WY+I+AE++ LG+LA + + LL GK K+IFTP QD+GD II+INA+KI V+GKK   K YFRHSGRPGGK +ENF++LQ RIPERI+EKAIKGMLPKN+LGRKLFTKLKVYKGP+HPH +QKP  +EL
Sbjct:    1 MKDTFNPLKRNYKQQWYIINAEDQYLGKLAVKASNLLRGKTKTIFTPEQDIGDYIIVINANKILVSGKKSINKTYFRHSGRPGGKKVENFQELQSRIPERIIEKAIKGMLPKNKLGRKLFTKLKVYKGPKHPHTAQKPHILEL 143          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0JZV9_9PHAE1.770e-9293.01Ribosomal protein L13 n=1 Tax=Desmarestia aculeata... [more]
A0A0R6ME26_UNDPI1.500e-8485.3150S ribosomal protein L13, chloroplastic n=27 Tax=... [more]
A0A7T8G5D9_SCYLO6.120e-8482.5250S ribosomal protein L13, chloroplastic n=5 Tax=E... [more]
A0A8F0F9Q3_9PHAE1.010e-8283.92Ribosomal protein L13 n=1 Tax=Chorda asiatica TaxI... [more]
A0A1I9LVW0_9PHAE2.030e-8080.4250S ribosomal protein L13, chloroplastic n=2 Tax=E... [more]
D1GJR0_FUCVE5.400e-7879.7250S ribosomal protein L13, chloroplastic n=3 Tax=F... [more]
A0A6B9TNL2_SARFS2.540e-7476.9250S ribosomal protein L13, chloroplastic n=13 Tax=... [more]
A0A8F0F7E0_9PHAE4.800e-7375.89Ribosomal protein L13 n=1 Tax=Protohalopteris sp. ... [more]
A0A2I4Q2L0_9PHAE1.480e-6970.7550S ribosomal protein L13, chloroplastic n=1 Tax=D... [more]
A0A8E5FBC5_9PHAE1.450e-6669.23Ribosomal protein L13 n=1 Tax=Phaeophyceae sp. Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005823Ribosomal protein L13, bacterial-typeTIGRFAMTIGR01066TIGR01066coord: 5..142
e-value: 2.3E-58
score: 193.9
IPR005822Ribosomal protein L13PIRSFPIRSF002181RPL13p_RPL13Aa_RPL16e_RPL13ocoord: 1..142
e-value: 5.0E-49
score: 164.1
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 16..139
e-value: 1.7E-51
score: 173.7
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 12..139
IPR005822Ribosomal protein L13HAMAPMF_01366Ribosomal_L13coord: 16..142
score: 27.749
IPR036899Ribosomal protein L13 superfamilyGENE3D3.90.1180.10coord: 2..143
e-value: 1.7E-57
score: 195.0
IPR036899Ribosomal protein L13 superfamilySUPERFAMILY52161Ribosomal protein L13coord: 8..142
NoneNo IPR availablePANTHERPTHR11545:SF12coord: 12..139
IPR023563Ribosomal protein L13, conserved sitePROSITEPS00783RIBOSOMAL_L13coord: 106..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10147contigD-dudresnayi_contig10147:2095..2526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10147.196.1mRNA_D-dudresnayi_contig10147.196.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10147 2095..2677 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10147.196.1 ID=prot_D-dudresnayi_contig10147.196.1|Name=mRNA_D-dudresnayi_contig10147.196.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=144bp
MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQD
VGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPER
ILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005823Ribosomal_L13_bac-type
IPR005822Ribosomal_L13
IPR036899Ribosomal_L13_sf
IPR023563Ribosomal_L13_CS