mRNA_D-dudresnayi_contig10147.196.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A8F0JZV9_9PHAE (Ribosomal protein L13 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZV9_9PHAE) HSP 1 Score: 273 bits (698), Expect = 9.230e-92 Identity = 133/143 (93.01%), Postives = 139/143 (97.20%), Query Frame = 1 Query: 1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 429 MKDTFIPSKLELKQ WY+IDAE+KCLGRLAT+VA LLTGKNKSIFTPAQD+GDCIII NADKINVTGKKRTQKLYFRHSGRPGGKTIE FEDLQ+RIPERI+EKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL Sbjct: 1 MKDTFIPSKLELKQQWYIIDAEDKCLGRLATKVANLLTGKNKSIFTPAQDIGDCIIITNADKINVTGKKRTQKLYFRHSGRPGGKTIETFEDLQLRIPERIVEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 143
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A0R6ME26_UNDPI (50S ribosomal protein L13, chloroplastic n=27 Tax=Laminariales TaxID=2886 RepID=A0A0R6ME26_UNDPI) HSP 1 Score: 253 bits (646), Expect = 7.700e-84 Identity = 122/143 (85.31%), Postives = 135/143 (94.41%), Query Frame = 1 Query: 1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 429 MKDTFIPSKL+LKQ WY+IDA++KCLGRLAT+V+ LL GKNKSIFTP+QDVGD III+NA +INV+GKKR QKLYFRHSGRPGGKT+E+FEDLQ+RIPERILEKAIKGMLPKNRLGRKLFTKLKVYKG EHPHMSQKPQ IEL Sbjct: 1 MKDTFIPSKLDLKQQWYIIDAKDKCLGRLATEVSNLLRGKNKSIFTPSQDVGDYIIIVNASQINVSGKKRVQKLYFRHSGRPGGKTVESFEDLQIRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGEEHPHMSQKPQKIEL 143
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A7T8G5D9_SCYLO (50S ribosomal protein L13, chloroplastic n=5 Tax=Ectocarpales TaxID=2877 RepID=A0A7T8G5D9_SCYLO) HSP 1 Score: 251 bits (642), Expect = 3.130e-83 Identity = 118/143 (82.52%), Postives = 136/143 (95.10%), Query Frame = 1 Query: 1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 429 MKDTF+PSKL LKQ WY+IDA++KCLGRLAT+V+ LL GKNK+IFTPAQD+GD IIIINA+KINVTGKKR+QK+YFRHSGRPGGKT+ENFE+LQ+R+PERI+EKA+KGMLPKNRLGRKLFTKLKVYKG EHPHMSQKP+ IEL Sbjct: 1 MKDTFVPSKLNLKQQWYIIDAKDKCLGRLATEVSNLLRGKNKTIFTPAQDIGDYIIIINANKINVTGKKRSQKIYFRHSGRPGGKTVENFEELQLRLPERIIEKAVKGMLPKNRLGRKLFTKLKVYKGEEHPHMSQKPKNIEL 143
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A8F0F9Q3_9PHAE (Ribosomal protein L13 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9Q3_9PHAE) HSP 1 Score: 248 bits (634), Expect = 5.180e-82 Identity = 120/143 (83.92%), Postives = 134/143 (93.71%), Query Frame = 1 Query: 1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 429 MKDTFIPS+L LKQ WY+IDA+NKCLGRLAT+V+TLL GK K+IFTP+QDVGD IIIINA+KINVTGKK+ +K+YFRHSGRPGGKTIE FEDLQ+RIPERILEKA++GMLPKNRLGRKLFTKLKVYKG EHPHMSQKPQ IEL Sbjct: 1 MKDTFIPSQLNLKQQWYLIDAQNKCLGRLATEVSTLLRGKKKAIFTPSQDVGDYIIIINANKINVTGKKQNKKIYFRHSGRPGGKTIETFEDLQLRIPERILEKAVRGMLPKNRLGRKLFTKLKVYKGQEHPHMSQKPQKIEL 143
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A1I9LVW0_9PHAE (50S ribosomal protein L13, chloroplastic n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A1I9LVW0_9PHAE) HSP 1 Score: 243 bits (619), Expect = 1.030e-79 Identity = 115/143 (80.42%), Postives = 133/143 (93.01%), Query Frame = 1 Query: 1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 429 MK+TF+PSKL+LKQ WY+IDA++KCLGRL+TQV+ LL GKNK+IFTP+QD+GD IIIINA+KI V+GKKR QK+YFRHSGRPGGKTIENFEDLQ R+PERI+EKAIKGMLPKN LGRKLFTKLKVYKG EHPHM+QKP+ IEL Sbjct: 1 MKETFVPSKLDLKQHWYIIDAKDKCLGRLSTQVSNLLRGKNKTIFTPSQDIGDYIIIINANKIKVSGKKRLQKIYFRHSGRPGGKTIENFEDLQSRLPERIIEKAIKGMLPKNHLGRKLFTKLKVYKGKEHPHMAQKPKNIEL 143
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: D1GJR0_FUCVE (50S ribosomal protein L13, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJR0_FUCVE) HSP 1 Score: 236 bits (603), Expect = 2.720e-77 Identity = 114/143 (79.72%), Postives = 129/143 (90.21%), Query Frame = 1 Query: 1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 429 MKDTFIPSK +LK+ WY+ DA++KCLGRLAT+V+ LL GK K+IFTPAQDVGD IIIINADK+ V+GKKR QK+YFRHSGRPGGK IENFE +Q+RIPERILEKAIKGMLPKNRLGR+LFT LKVYKG EHPH+SQKPQ IEL Sbjct: 1 MKDTFIPSKCDLKKQWYIADAKDKCLGRLATEVSNLLRGKGKTIFTPAQDVGDYIIIINADKVFVSGKKRIQKMYFRHSGRPGGKKIENFESIQIRIPERILEKAIKGMLPKNRLGRQLFTNLKVYKGSEHPHISQKPQIIEL 143
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A6B9TNL2_SARFS (50S ribosomal protein L13, chloroplastic n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A6B9TNL2_SARFS) HSP 1 Score: 227 bits (579), Expect = 1.260e-73 Identity = 110/143 (76.92%), Postives = 126/143 (88.11%), Query Frame = 1 Query: 1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 429 MKDTFIPSK LK+ WY+IDA+NKCLGRLAT+++ LL GK K IFTP Q++GD IIIINA+KI V+GKKRTQK+YFRHSG PGGKTIE FEDLQ+RIPERILEKAIKGMLPKNRLGRK F L+VYKG +HPH+SQKPQ I+L Sbjct: 1 MKDTFIPSKQNLKKQWYIIDAKNKCLGRLATEISILLRGKKKVIFTPTQNLGDSIIIINAEKIFVSGKKRTQKVYFRHSGSPGGKTIETFEDLQMRIPERILEKAIKGMLPKNRLGRKFFKNLRVYKGSKHPHVSQKPQIIKL 143
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A8F0F7E0_9PHAE (Ribosomal protein L13 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7E0_9PHAE) HSP 1 Score: 224 bits (572), Expect = 1.680e-72 Identity = 107/141 (75.89%), Postives = 126/141 (89.36%), Query Frame = 1 Query: 1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTI 423 MKDTFIP+KL +KQ WY+IDA+++CLGRLAT+V+ LL GK K +FTP+QDVGD I+IINADKINV+GKK QKLYFRHSGRPGGKTIE+FE L++R+PERI+EKAIKGMLPKNRLGRKLFTKLKVY G EHPH+SQ P + Sbjct: 1 MKDTFIPTKLRVKQKWYIIDAKDQCLGRLATRVSNLLRGKKKILFTPSQDVGDYIVIINADKINVSGKKFIQKLYFRHSGRPGGKTIESFEKLKLRLPERIIEKAIKGMLPKNRLGRKLFTKLKVYTGTEHPHLSQDPTIL 141
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A2I4Q2L0_9PHAE (50S ribosomal protein L13, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2L0_9PHAE) HSP 1 Score: 215 bits (548), Expect = 7.270e-69 Identity = 104/147 (70.75%), Postives = 123/147 (83.67%), Query Frame = 1 Query: 1 MKDTFIPSKLEL----KQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 429 MK+TFIPS+ L K+ WY++DA+NKCLGR+AT++ LL GKNK FTP+Q++GD IIIINA+++ VTG K TQK YFRHSGRPGG+TIENFE LQ R+PER+ EKAIKGMLPKNRLGRKLFTKLKVY GP HPH +QKPQ IEL Sbjct: 1 MKNTFIPSQTILHPGRKEKWYIVDAKNKCLGRVATKITNLLRGKNKITFTPSQNIGDYIIIINAEQVKVTGNKFTQKTYFRHSGRPGGQTIENFETLQSRLPERVFEKAIKGMLPKNRLGRKLFTKLKVYSGPNHPHSAQKPQFIEL 147
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Match: A0A8E5FBC5_9PHAE (Ribosomal protein L13 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5FBC5_9PHAE) HSP 1 Score: 207 bits (528), Expect = 7.010e-66 Identity = 99/143 (69.23%), Postives = 119/143 (83.22%), Query Frame = 1 Query: 1 MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDVGDCIIIINADKINVTGKKRTQKLYFRHSGRPGGKTIENFEDLQVRIPERILEKAIKGMLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 429 MKDTF P K KQ WY+I+AE++ LG+LA + + LL GK K+IFTP QD+GD II+INA+KI V+GKK K YFRHSGRPGGK +ENF++LQ RIPERI+EKAIKGMLPKN+LGRKLFTKLKVYKGP+HPH +QKP +EL Sbjct: 1 MKDTFNPLKRNYKQQWYIINAEDQYLGKLAVKASNLLRGKTKTIFTPEQDIGDYIIVINANKILVSGKKSINKTYFRHSGRPGGKKVENFQELQSRIPERIIEKAIKGMLPKNKLGRKLFTKLKVYKGPKHPHTAQKPHILEL 143 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10147.196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10147.196.1 >prot_D-dudresnayi_contig10147.196.1 ID=prot_D-dudresnayi_contig10147.196.1|Name=mRNA_D-dudresnayi_contig10147.196.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=144bp MKDTFIPSKLELKQTWYVIDAENKCLGRLATQVATLLTGKNKSIFTPAQDback to top mRNA from alignment at D-dudresnayi_contig10147:2095..2677+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10147.196.1 ID=mRNA_D-dudresnayi_contig10147.196.1|Name=mRNA_D-dudresnayi_contig10147.196.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=583bp|location=Sequence derived from alignment at D-dudresnayi_contig10147:2095..2677+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10147:2095..2677+ >mRNA_D-dudresnayi_contig10147.196.1 ID=mRNA_D-dudresnayi_contig10147.196.1|Name=mRNA_D-dudresnayi_contig10147.196.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=864bp|location=Sequence derived from alignment at D-dudresnayi_contig10147:2095..2677+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |