mRNA_D-dudresnayi_contig1007.107.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig1007.107.1
Unique NamemRNA_D-dudresnayi_contig1007.107.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1007.107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig1007contigD-dudresnayi_contig1007:14896..22252 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size380
Cds size309
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig1007.107.1prot_D-dudresnayi_contig1007.107.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig1007 21944..22252 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927507.7184396-UTR-D-dudresnayi_contig1007:14895..149251622927507.7184396-UTR-D-dudresnayi_contig1007:14895..14925Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1007 14896..14925 -
1690556783.625326-UTR-D-dudresnayi_contig1007:14895..149251690556783.625326-UTR-D-dudresnayi_contig1007:14895..14925Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1007 14896..14925 -
1622927507.7298777-UTR-D-dudresnayi_contig1007:21902..219431622927507.7298777-UTR-D-dudresnayi_contig1007:21902..21943Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1007 21903..21943 -
1690556783.6345372-UTR-D-dudresnayi_contig1007:21902..219431690556783.6345372-UTR-D-dudresnayi_contig1007:21902..21943Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1007 21903..21943 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927507.746161-CDS-D-dudresnayi_contig1007:21943..222521622927507.746161-CDS-D-dudresnayi_contig1007:21943..22252Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1007 21944..22252 -
1690556783.6433313-CDS-D-dudresnayi_contig1007:21943..222521690556783.6433313-CDS-D-dudresnayi_contig1007:21943..22252Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1007 21944..22252 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig1007.107.1

>prot_D-dudresnayi_contig1007.107.1 ID=prot_D-dudresnayi_contig1007.107.1|Name=mRNA_D-dudresnayi_contig1007.107.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=103bp
METNSPDKLSQGISRKRPRRDDDPVAPGSVQTGAIRTRRFGRDFSSGLEL
TATPEDVVIPDLEGHDLGVTSTTAIGVETATSGGGAIEPLFSLASGVTVK
VK*
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mRNA from alignment at D-dudresnayi_contig1007:14896..22252-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig1007.107.1 ID=mRNA_D-dudresnayi_contig1007.107.1|Name=mRNA_D-dudresnayi_contig1007.107.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=7357bp|location=Sequence derived from alignment at D-dudresnayi_contig1007:14896..22252- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGAGACAAACTCTCCGGACAAACTTAGCCAGGGAATTTCGAGAAAGCG
ACCACGCCGGGATGATGATCCCGTGGCTCCGGGCTCAGTTCAAACAGGGG
CCATACGGACGCGTAGATTTGGACGAGACTTTTCTTCTGGCCTAGAACTA
ACGGCCACCCCTGAAGATGTGGTCATCCCGGATTTGGAGGGTCATGACTT
GGGAGTGACAAGCACTACTGCGATCGGTGTTGAAACGGCGACTTCAGGTG
GTGGAGCGATCGAACCGCTGTTCTCCCTAGCATCAGGAGTGACGGTGAAG
GTGAAATAGAGGTCGTCTCGGCATGATGGCATTCTCGCCAATCGCTGCAG
GTATGTCCACAGCAGGATTTTGGCTTTCTACGATATACTCGTACGTAGCG
CTAGGTTGTTTTTTTACATCTATCTTGCATTGTAATGCAAATTCAGGACA
AGGCCTGCACAAAGGTTTATGCAGTTGTTTAACCTTGATTCCTTACGCAC
CGAACATATTACCGCTGCACTGCTTACTAGAGTGGGAGTGAAAAAAAGCA
CGCGGCAGGGACTGTGATAGGGTAGTTTTTCTTCCGATGGGAAGAGTAGT
ACTCCCGGTTCACGTGGCGAGTTAATCTTAACACACGTATTCATTCGTGA
ATTGCTATATACCCCATAGCGGACAAACGGATCCACACCCTACATGTTTG
CTCCGTGGGCAATATTCACGTGGGACGGGAAGAGGGTTGGGGAGACGGGC
TTGGTGTTGAGCACCCCCGCCTATTGTGTTGTTTCTTCTCCATCTGAGTT
TTGGTAATGGTTTAGTGGTACGAGCGATATCATGTGTTTAGAAAAGGCTG
GAATGGCTCGGGTGTACGCAGAACAAGGTTTAAAGCCTAGCGGATAGGTA
AAGCCTCCTTTCGAGACTAGCCGGTGTCTTGTGCGGGCCAGCTTCTTCGC
GACCCACTGGTCTTTTTCCATGTCAGTTCTATCAATTTTATACGTGTCCT
TTGTCTAGAACATGTAGTCTACTGTAGAAGGCGTCACGCACCATGCTCTT
CGTAGAGCCAGGGATCCTGTTGACCATGAATTTATCAACGACGATTACCA
TGCCGCTGACCCTGAAGGGACTGGCAGCGGCCATCCTAGCGAAAGTGGCG
TTTCGCAGGTTAGTCGGAAAGGCTCCAAGCCAGAGACCGTTGGCCAAAGC
CGCGAGCGGCATTTTTTTGTTTCGAAGTCTTGCTACGCAGTTGTCGCACA
ATTGAAGCCGACAGGGAGTCTCGGTCTTGATCCCTAGCCTGGACAGCACG
AGGTTGCGAAGTTGATCGCCTGCATTGCCACGGCAGTTGACAAACTCGCT
TTGGATGGCCTCGCAGTTGCAAAGGTGCTCCCCTGCAGTCAGAAGTGCCT
TTGTCAGTAGCAAGTCTTTAGCGGCCAACCATCGACACTCGATCTTGCGG
GATCGACAATCGCACACAGCACATGCTGCCAGAAACGGTCGGTAGTGAGG
AAGATGAGCGAGTCGTCGTACAACCCGCCGCAGCACCGCCCACAGTTTGT
AGTTTTTACCCGCAGCGATAAGCCTTTTAATATAGTATGCTCCATCCAGC
GGTAGACCTCAATCTCACACACCACACAAGAAGGCAATACCACCTGGTCC
AGTCGGTGCATGCTTGTATAATTCTGCACTCTACTTATAACACTGTGCTA
CTACTGCACTGTTGTGCTATACTGTGCGTGTATGTGTATGTGTAGGTATT
AGTAGCACGCGGTATAAACACCGTCGCTGATCAAGGCATATGCATGTACA
GCAGTCGCTATCAAACATCTGTACCGCAATGCACCAAGAGAGTGCAAGAT
GTGAGCCACAACAGACAGTTGTAAATACCGCGGATTCAGCAGTCTGCTGT
GCGGATGCTTCAGACCCGCCAAGTCCATTGCGTAAGCACTGCCGCATGCA
GTAGTTCTCCTGTCTGTACCAGTAGTCTATAACTGCTGGCGACCATGATG
CTGTTGATCACTCACCGCAACCCAATAGTAGCCGTGATTGATATAGGAAC
GAGACCGGTAAGCTTGGTCAGGGATAGTGGTGGAGGCTCGTTGGCAGTTT
ATCCTCAAATCATTGACGTAGAAAGCTATGAAAAGTGTCGGTGTGCAGTG
TGGTGTCGATGTACCGCAGTTTTTTGCTCCTCGATGTTTTGGAATCGCTA
TGTAGTGTGATCAGTCGTGTAGGTGATGCTATTGCAACGGGTTGTGATGT
ACCGATTGACGCTGACAGCGTACGAATACTGTACCCAGAACTCATTGCAC
ACTCCATGCACTCACGAAGATTCGGTTTGATCGTGTTTGAAGCTGGACAT
AATAGCTTCACAACGGTGTCGCTGGTACGGCGTATCGTTTCCATTGGCGC
AAGTCGTTCGCACATACGGCTATTCGCTTGAGTAGCGATTACACCTATTC
ACTCAAGTGATGATTTCACCTTCGGGATTTCCACGGATGAGTGTCCAGTC
TAATCTAAACAGGAAAAGTGGAGTAGCTAAACGATAAGAACAATCCCTCG
CATTTGACACATTACTGTATGTGTTGAAGAAATCATGAAGAGCTGTCTGC
TCCAGCACCTTCAGATCTGCAGTGTGGGTCAACATCTTCTGTCTTCAGCG
CGTGCACCAGCTGGCCAACCTGTGGCTCGAAAATCTCACAAAGAACCACC
GTTTGGTGCTCGTTACCAAAATTTACGGCGTGATCGACACCCAAGTCGGA
GGTTGCAGCGACAAATACTTATCCAACGAACTGTCTGGCCCGCGTCCAGT
GACATTGTAGCCCATGGCACTGGCAGATCTAAATTGATTTGTCTCTCGCG
CGTGCAGTGATTCTGCAGTTCACGGGGCGTGCGAACGTTAGCCGTGTACG
CCCCCAGCTCTCCGGATGCGACGATGCCGTCAAAACAGGTGGTTCGTGAG
TCGCAACGAGCGTCCCGCGAGAATCTAGGCGCGTTGGCAGGCCCGGCAAA
GTCGTTTATGACGCCGATTGGGAAAGCTGTCCTGGACGATGAGGGCTTAC
TCCGCGTTGCGTTCGAGGGACGCGAGGGTATTATGGATCCCACGTTGCGT
TCGAGGGACGCGAGGGTATTATGGATCCCTGGGAAAGCCAAAGATTTGCA
GGTGCAGTTGATGGTATGTGCTCACATGACGGAAGCCGGGCATCGGGGTA
TTGTCCCAACCTTGCAGCGGTTGACAGAGTATTGCTGCTGGTTTCGTATG
GAGGAACATGTCGCGGACTTCGTGAAGCAGTGCCTGCATTGTATGGATCT
AAGGCGGGTGAGAAAGTGCCCGCGCCCGTTTCGAGACACCGTGCATGATA
CACGGCCCGGAGAGGTTTTTCAGTTACACCACCTATACGTCGGAGCAAGT
GGGGCATTGGGGGTAGATAGATTAGATGAGGAGGACGGTTAGAAGTACAT
CCTTGTCATGATGGATGATCTGAGCAACTTTACGTGGCTGGAGCCAACGA
GCGCGTGTACGGCGCGGCTGACGGCGCGACATCTCCTGACTTGGTGCAAG
ACTCTCGGCGTTCCTGATATCTGGGTGAGTGATACGGCGTCGCATTCAAG
AACCACATCATGACAGCGCTTGAAAACGCGCTGGGAGTTGACAGGCAGTT
TTCCATGGCCAACTCGCCTTGGTCGAATGGGACGTGTGAACGAATGATGC
TCGAAGTGGTAGGTACGCTAAAAGCCATGGTGCAAGAAGGGAGGCGGAGT
GCCCGCGATTGGGTGGCGCTAGTACCCGCGGTGCAATGGGCCCTTAACAC
GGCGTTTCGTGAGAGGTACGCATCAATGCCTTATCATGTGGTGTTTGGTA
GGGCGCCAAAACCAACTTTGCTACCTTGGCGTCTTCTTCGGGAGGTGATT
GGAAGGTGGATGGGCCGGATGAGATGTCTCTGCGAAAAAGGTCAAACTGG
TGGTGGAGACGCAGAGTCAACTACGCGAGGAGGTTTTGCAAACAAATTAG
AGCAACCATGAGAAGAAGCGGGTTGCCGAAAGCCGAGGGCAGTTGCCGAA
TTTTGCGGTTGGTGAGTACGTTTGGTGGCGCGTGTGCGAAGGAGTAGATC
AACGCCGAAGCTCGTGACGACGTGGACGGGACCTTGGCGCGTGGTGACTA
CGGGACAGCGGCACGTTTATGGTGTCCAAACCATCGTTTCGGGAGAAGTG
CGTGACGTTCATGTCGCTCGACTTCGGTTTTATGCCGACGACGCTCTTGA
GATCAGCGTCGCGCTCAAGGAATTTTTCCAGCACTCCTTCACACAGGGGG
GTTCGAGATGGCAGCGATCGCCGACATGTCGGAAGCAGACGAAGGCTCTG
GGTTTGATGTTGATATCGAGTGGGTTGGATTCGACAAGGAAGAGAATTTT
TGGGAGCCGTTGTCGAAGATCTGGGATGCGGCCCCGCTGTTCGTGAAGAC
GGAGCTACGCAATTTGGGGTTCGACCGTCGTATGCGCTCCCGCCTAAAGC
AGCAGTATGGTATTGTCCTGTGAGTGGCGTGTGTTTTTTCGTTTGCGGTT
GCGCGTGGGCTGTTTTCTTAGGTTTTAGAATATTTCTTCGCAGACGGTCA
TTCTTTGTCTACGGTTGTGGTTGAACAACGGTTGTCTATCAACGTTTTGG
TGATATTTGTCGCTAAGTAATATATTTGAATTGAGCATGCAGTTTAACGA
GAATTGTCTAATAGGAAACTTGGATGATTTTGGTTGATGAGGGTAGCCCA
AAATGAATTGAGGGCATTGTCTTGGTGATTGGCTGCAATGTCTTAGTTGA
GCGCGGGCCGTCCAGTGTGAATTTGATGGCATTTTCTCGTTGACTGGTGT
ATGTTTTTTTTTATTCTAAATGCTTTAGGGTTTAGTTTCTGTTGCGACTA
AAAAAAAAACACTAAATAATTCTGACCGCACTTTTCTGACCGCGGTTGCC
CACAGAAGGCATGACCCTTGCAAATTTTTTGTCGGTTCTCTCGCGGTTAC
CTGGCAATTGCAACGGTCACCAAAACAGTATCTGGCGATTGCAATAGACA
TCTGGTACACACAACACCCGTCAGATTCAACTTTCAGCGCCAGGGGTGAC
GTGTGAGTAAAGATACGAGTTTTGGCCTCAGTCCCCAATTCGGCGAAGTT
TTGCGGCCCGATTTGGCTTTTGCCACATGGGTTTTTCTCGTCTCCCAGCA
GACGGCTTTCGCTAAAAATGGATGGCCTGTGAAGAGCGACGCCACCTACA
AGCGTGAATTAGGGTCATGTCTGTCTGTTAGGGGTGGAATGCGCACTATA
TATATAATTTTTACGCAAGCACACACAAGGGCCACAGCAGCACATCCGAT
CCCCTCCGAGCGAGGCGTTGCTGTAGCCTGGAAGAGCTTTTTTGATGAGG
GGATACTCGCATCTAATTTTGAGCTTCCGTGTATACAGCTCTCAGCTCTG
CTCTGTCCACTACTACTGTGTCAGCTGCCACCATGCTGATGCGTGTAGTG
CGGGCCACGGCCTTGTTCGTACGGTGTGGTATGACTGCATAGCTCCCACA
TGGTGCTGCATGGTGCTGTGGTTAGTACGGGCCATGGCCTTAACCCTCCG
AAATATTATAATCCAGTGCAGACGATGATGGGGTTTGTTTCCTAAAATTA
TCCTGTAGAGCCTGGGACACCCCAGGGGAGCCGCTGCGTTCTAACTTATC
TCAGGACCGATAGATTATATTCCAGTGTGCACGATGATGGGGCCTGTTTC
CCAAAATTATCCTGTAGAGCCTGGGACACCCCAGGGGAGCCGCTGCGATA
TAACTTATCTCAGGACCGATAGAATCCGCGCGACCAATGTATCACACAGT
GAGGTTGACGATTATCCCTAAGCACCGGCAGCATGAATACCGGCAAGAAA
CACAGACATGGACGCCCACCTTGCCGCAAGCGCGCAAAGCCCACGCACAG
GACCATGGAGCTGAATTTGGTGTACACTTCTGTGCTCTATATATACACTT
CGTATGTGACCTACATAGCACCTGCAGCACGAACACCGGCAAGACACACA
GACAAGGACGCCCACCCTGCCGACTACTGCTGTTGTATGATACCATCTAT
CTCTATACTCTGCCCAGCTACAGCGCCGCCAGCACTTCTGTGCTCTATAT
ATATACTCCGTATGTGACCTACATAGCACCGGCAGCATGAATACCGGCAA
GACACACAGACAAGGACGCCCACCCTGCCACATACGCGCGAAGCCCGCGC
ACAGGACCATGGAGCTGAATTTGGTGTTCAAAGACAACAACAGTACATGT
TTTTCGGACTTACTCTCTCCACCGGGGGGAAAAACGGAGGAGGGGATTTA
GATCGAGGCTAGGGTGAACCCCAGCCGTTCTATGGCTTAAACAAAGTCAC
GGCTATTGATACAGTAGTGTCGGGGATCCCGGTAAGGCTTTTATAGGGAA
ACCTGACGTCCTTGATGGTTGGTGGGTTGGATGCGGATGTCTTTGACTGT
TGGATGCGGATGTCTTTGAATACGGTACCGCCGTATATTGTCGTTTATCA
TTCACAAACGACAAATTCAACGTTTTGTCATGTTCGATGGTAATTTCTTG
CTAACGTGTGTTTTATACGATGCTTTTGATCATGGATATTGGATGACTTC
TGCGGATCAAGCTAATTGATGTCTACTCGAGGTAGAAATGAGCTTTGGGG
GCACTGTGGTGTAGGTAGCCCAATAGGGTGTCGTGGATGAATGTAGCTCT
GCCGGTTGGAGTCTATAGGATATTTGATCACACGGTAGCGAGGGGTTTCC
CTTGTTGGGCTCAGGGATGCATGATTGATGAGGGTGCGGGTGTAATGGAG
GACTTCAAGTGCAACAAGGGAACTCTATAATAAAATAGTTGGATTGTGTG
TTTCAATGAGTGCTTGTACCGGTCCCCTTGAGTAGGGGAAGAGTCACTGG
TGCACCGAAGACCTTGCCAGACTCTGACTGGTCCACAGGTGACAGCGATC
ACCAGACGGTGGGGGTTGCTACGGACTCGTTTTGAACACACCACTTGTTC
CATAGTGTGCCTGCATGCTGACGTGTTCGTGGAGAGTACTAGAAAGTAGC
AACACGTTTTTGGTTTTGCTTGTGGTGACGCCGAGCTCGTGATTGGGTTA
TCATTGGTACCGGGCTCTAAGATTGTTTCGCGGTTTCTGTCTCGACTTGG
TTCCATGCTTCATTATTCGAGAAGTGATTTGTAGGTGAACAACTCTGTTG
GGCTATCTCTTCCTATGCCGTTCTCCCCGTCACCCGTTCCCGTCGTGTTT
GCCCCGCCCCCGTACAACGCACACCAGGATCTCCAAATGGTGCTGCCGCA
GCCGACG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig1007:14896..22252-

>mRNA_D-dudresnayi_contig1007.107.1 ID=mRNA_D-dudresnayi_contig1007.107.1|Name=mRNA_D-dudresnayi_contig1007.107.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=618bp|location=Sequence derived from alignment at D-dudresnayi_contig1007:14896..22252- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGAGACAAACTCTCCGGACAAACTTAGCCAGGGAATTTCGAGAAAGCG
ACCACGCCGGGATGATGATCCCGTGGCTCCGGGCTCAGTTCAAACAGGGG
CCATACGGACGCGTAGATTTGGACGAGACTTTTCTTCTGGCCTAGAACTA
ACGGCCACCCCTGAAGATGTGGTCATCCCGGATTTGGAGGGTCATGACTT
GGGAGTGACAAGCACTACTGCGATCGGTGTTGAAACGGCGACTTCAGGTG
GTGGAGCGATCGAACCGCTGTTCTCCCTAGCATCAGGAGTGACGGTGAAG
GTGAAATAGATGGAGACAAACTCTCCGGACAAACTTAGCCAGGGAATTTC
GAGAAAGCGACCACGCCGGGATGATGATCCCGTGGCTCCGGGCTCAGTTC
AAACAGGGGCCATACGGACGCGTAGATTTGGACGAGACTTTTCTTCTGGC
CTAGAACTAACGGCCACCCCTGAAGATGTGGTCATCCCGGATTTGGAGGG
TCATGACTTGGGAGTGACAAGCACTACTGCGATCGGTGTTGAAACGGCGA
CTTCAGGTGGTGGAGCGATCGAACCGCTGTTCTCCCTAGCATCAGGAGTG
ACGGTGAAGGTGAAATAG
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