mRNA_D-dudresnayi_contig10066.103.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10066.103.1
Unique NamemRNA_D-dudresnayi_contig10066.103.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10066.103.1 vs. uniprot
Match: T1F2K4_HELRO (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1F2K4_HELRO)

HSP 1 Score: 74.7 bits (182), Expect = 1.290e-15
Identity = 41/85 (48.24%), Postives = 53/85 (62.35%), Query Frame = 1
Query:   13 FEVMRFEREKALAKGC----SSQEVLEWWLVQRKFFPTLYKVACVYLAAPATSAASERVFSDAGNIITKKRNRLSPENANNLIFL 255
            F+V   ++ KA++K C    S      WW    + +PT+ KVA VYLA P TS  SER+FS AG+IIT+ R RL P+NA  LIFL
Sbjct:   12 FDVKTNDKSKAVSKECNAVLSRGRPATWWKFNTRKYPTISKVAQVYLAPPPTSVPSERLFSTAGDIITEHRTRLLPDNAEKLIFL 96          
BLAST of mRNA_D-dudresnayi_contig10066.103.1 vs. uniprot
Match: A0A0A1WMC4_ZEUCU (Putative AC9 transposase n=1 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1WMC4_ZEUCU)

HSP 1 Score: 73.2 bits (178), Expect = 1.990e-14
Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = 1
Query:   70 EVLEWWLVQRKFFPTLYKVACVYLAAPATSAASERVFSDAGNIITKKRNRLSPENANNLIFL 255
            +V++WWL   K +P L K+A   LA PA+SAASERVFS AGNIIT+KRNR++P+  ++++FL
Sbjct:   90 DVMQWWLNNNKRYPRLSKLAEKVLAIPASSAASERVFSLAGNIITEKRNRIAPKTVDSILFL 151          
BLAST of mRNA_D-dudresnayi_contig10066.103.1 vs. uniprot
Match: UPI001C9A9669 (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9A9669)

HSP 1 Score: 74.7 bits (182), Expect = 8.680e-14
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 1
Query:   79 EWWLVQRKFFPTLYKVACVYLAAPATSAASERVFSDAGNIITKKRNRLSPENANNLIFL 255
            EWW  +   +P + +VA  YL  PATSA SER FS AGNI+TKKRNRL PEN N L+FL
Sbjct:  417 EWWKARTNKYPAISEVAKKYLTIPATSAMSERCFSCAGNIVTKKRNRLLPENVNTLVFL 475          
BLAST of mRNA_D-dudresnayi_contig10066.103.1 vs. uniprot
Match: UPI0005F55F89 (zinc finger BED domain-containing protein 1-like n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F55F89)

HSP 1 Score: 72.8 bits (177), Expect = 1.830e-13
Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 1
Query:   70 EVLEWWLVQRKFFPTLYKVACVYLAAPATSAASERVFSDAGNIITKKRNRLSPENANNLIFL 255
            + LEWW  +   FP L  +A  YL+ PATSA++ER FS AGNI+T KRN LSPEN N L+FL
Sbjct:  207 DYLEWWKTRADKFPALAILARKYLSIPATSASAERTFSTAGNIVTPKRNCLSPENVNMLVFL 268          
BLAST of mRNA_D-dudresnayi_contig10066.103.1 vs. uniprot
Match: UPI001E1D9C2F (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D9C2F)

HSP 1 Score: 73.6 bits (179), Expect = 2.280e-13
Identity = 35/63 (55.56%), Postives = 48/63 (76.19%), Query Frame = 1
Query:   67 QEVLEWWLVQRKFFPTLYKVACVYLAAPATSAASERVFSDAGNIITKKRNRLSPENANNLIFL 255
            Q+ +EWW  +R  +PTL ++A  YL  PATS  SERVFS AG+I++KKR+ L+PENA+ L+FL
Sbjct:  546 QDRIEWWCKKRGLYPTLAQMAMRYLHIPATSVPSERVFSTAGSILSKKRSSLTPENADMLVFL 608          
BLAST of mRNA_D-dudresnayi_contig10066.103.1 vs. uniprot
Match: T1EL08_HELRO (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Helobdella robusta TaxID=6412 RepID=T1EL08_HELRO)

HSP 1 Score: 67.8 bits (164), Expect = 3.130e-13
Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   82 WWLVQRKFFPTLYKVACVYLAAPATSAASERVFSDAGNIITKKRNRLSPENANNLIFL 255
            WW      +PT+ KVA VYLA P TS  SER+FS AG+IIT+ R RL P+NA  LIFL
Sbjct:    8 WWKFNTAKYPTISKVAQVYLAPPPTSVPSERLFSTAGDIITEHRTRLLPDNAEKLIFL 65          
BLAST of mRNA_D-dudresnayi_contig10066.103.1 vs. uniprot
Match: A0A3L8E0S8_OOCBI (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A3L8E0S8_OOCBI)

HSP 1 Score: 72.4 bits (176), Expect = 5.030e-13
Identity = 36/60 (60.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query:   76 LEWWLVQRKFFPTLYKVACVYLAAPATSAASERVFSDAGNIITKKRNRLSPENANNLIFL 255
            LEWW  +   FP L  +A  YL  PATSA++ER FS AGNI+T KRN LSPEN N L+FL
Sbjct:  322 LEWWKTRADKFPALAILAKKYLCIPATSASAERTFSTAGNIVTSKRNCLSPENVNMLVFL 381          
BLAST of mRNA_D-dudresnayi_contig10066.103.1 vs. uniprot
Match: E2BS40_HARSA (Zinc finger BED domain-containing protein 1 (Fragment) n=2 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BS40_HARSA)

HSP 1 Score: 67.0 bits (162), Expect = 6.140e-13
Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query:   76 LEWWLVQRKFFPTLYKVACVYLAAPATSAASERVFSDAGNIITKKRNRLSPENANNLIFL 255
            L+WW      +P +  +  VYLA  A+SA+SERVFS AGNI+T KRN LS EN N LIFL
Sbjct:    3 LKWWKAHENLYPMIAALTKVYLAILASSASSERVFSTAGNIVTAKRNCLSTENVNLLIFL 62          
BLAST of mRNA_D-dudresnayi_contig10066.103.1 vs. uniprot
Match: U9TMC6_RHIID (Uncharacterized protein (Fragment) n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=U9TMC6_RHIID)

HSP 1 Score: 66.6 bits (161), Expect = 7.320e-13
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 1
Query:   76 LEWWLVQRKFFPTLYKVACVYLAAPATSAASERVFSDAGNIITKKRNRLSPENANNLIF 252
            L WW + +  FP L K+A  YLA PATS  SER+FS+AGN++T KR +L+P    NL+F
Sbjct:    1 LTWWRINKTRFPVLSKLARKYLAIPATSTPSERLFSEAGNVMTIKRTQLAPNMLENLVF 59          
BLAST of mRNA_D-dudresnayi_contig10066.103.1 vs. uniprot
Match: UPI001ED823D3 (E3 SUMO-protein ligase ZBED1-like isoform X1 n=2 Tax=Scatophagus argus TaxID=75038 RepID=UPI001ED823D3)

HSP 1 Score: 72.0 bits (175), Expect = 8.070e-13
Identity = 33/83 (39.76%), Postives = 55/83 (66.27%), Query Frame = 1
Query:    7 AEFEVMRFEREKALAKGCSSQEVLEWWLVQRKFFPTLYKVACVYLAAPATSAASERVFSDAGNIITKKRNRLSPENANNLIFL 255
            A  E+ R+ +E+ L++    ++ L++W  ++  +PTL+K+AC YL  PA+S   ER+FS AG +++KKR+RL P     +IFL
Sbjct:  819 ATVEIQRYLKEQILSRA---EDPLKYWEARKTLYPTLWKLACKYLCIPASSVPCERIFSKAGELVSKKRSRLKPATVEKIIFL 898          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10066.103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
T1F2K4_HELRO1.290e-1548.24Dimer_Tnp_hAT domain-containing protein n=1 Tax=He... [more]
A0A0A1WMC4_ZEUCU1.990e-1456.45Putative AC9 transposase n=1 Tax=Zeugodacus cucurb... [more]
UPI001C9A96698.680e-1461.02E3 SUMO-protein ligase ZBED1-like n=2 Tax=Colletes... [more]
UPI0005F55F891.830e-1358.06zinc finger BED domain-containing protein 1-like n... [more]
UPI001E1D9C2F2.280e-1355.56E3 SUMO-protein ligase ZBED1-like n=2 Tax=Mercenar... [more]
T1EL08_HELRO3.130e-1358.62Dimer_Tnp_hAT domain-containing protein n=4 Tax=He... [more]
A0A3L8E0S8_OOCBI5.030e-1360.00Dimer_Tnp_hAT domain-containing protein n=3 Tax=Oo... [more]
E2BS40_HARSA6.140e-1356.67Zinc finger BED domain-containing protein 1 (Fragm... [more]
U9TMC6_RHIID7.320e-1352.54Uncharacterized protein (Fragment) n=2 Tax=Rhizoph... [more]
UPI001ED823D38.070e-1339.76E3 SUMO-protein ligase ZBED1-like isoform X1 n=2 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10066contigD-dudresnayi_contig10066:8133..8387 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score75.1
Seed ortholog evalue1.6e-11
Seed eggNOG ortholog6412.HelroP146924
EggNOG free text desc.hAT family C-terminal dimerisation region
EggNOG OGs3A8WV@33154,3C2GR@33208,3DI89@33213,KOG1121@1,KOG1121@2759
COG Functional cat.L
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size255
Cds size234
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927507.2996137-UTR-D-dudresnayi_contig10066:8132..81531622927507.2996137-UTR-D-dudresnayi_contig10066:8132..8153Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10066 8133..8153 +
1690556783.438609-UTR-D-dudresnayi_contig10066:8132..81531690556783.438609-UTR-D-dudresnayi_contig10066:8132..8153Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10066 8133..8153 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927507.3186536-CDS-D-dudresnayi_contig10066:8153..83871622927507.3186536-CDS-D-dudresnayi_contig10066:8153..8387Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10066 8154..8387 +
1690556783.4490027-CDS-D-dudresnayi_contig10066:8153..83871690556783.4490027-CDS-D-dudresnayi_contig10066:8153..8387Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10066 8154..8387 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10066.103.1prot_D-dudresnayi_contig10066.103.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10066 8154..8387 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10066.103.1

>prot_D-dudresnayi_contig10066.103.1 ID=prot_D-dudresnayi_contig10066.103.1|Name=mRNA_D-dudresnayi_contig10066.103.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=78bp
MRFEREKALAKGCSSQEVLEWWLVQRKFFPTLYKVACVYLAAPATSAASE
RVFSDAGNIITKKRNRLSPENANNLIFL
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mRNA from alignment at D-dudresnayi_contig10066:8133..8387+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10066.103.1 ID=mRNA_D-dudresnayi_contig10066.103.1|Name=mRNA_D-dudresnayi_contig10066.103.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=255bp|location=Sequence derived from alignment at D-dudresnayi_contig10066:8133..8387+ (Desmarestia dudresnayi DdudBR16 monoicous)
CCGTTGGCGGAGTTCGAGGTGATGCGTTTTGAGCGGGAGAAGGCTCTGGC CAAGGGCTGCAGCTCCCAGGAGGTGCTGGAGTGGTGGTTGGTTCAACGGA AGTTCTTCCCAACCCTGTACAAGGTCGCGTGCGTCTACCTGGCCGCACCG GCGACCTCTGCAGCATCGGAGCGCGTTTTCTCCGATGCTGGAAACATCAT CACCAAAAAGCGAAACCGGCTTTCGCCTGAGAACGCTAACAACCTCATTT TCCTC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10066:8133..8387+

>mRNA_D-dudresnayi_contig10066.103.1 ID=mRNA_D-dudresnayi_contig10066.103.1|Name=mRNA_D-dudresnayi_contig10066.103.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=468bp|location=Sequence derived from alignment at D-dudresnayi_contig10066:8133..8387+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCGTTTTGAGCGGGAGAAGGCTCTGGCCAAGGGCTGCAGCTCCCAGGA
GGTGCTGGAGTGGTGGTTGGTTCAACGGAAGTTCTTCCCAACCCTGTACA
AGGTCGCGTGCGTCTACCTGGCCGCACCGGCGACCTCTGCAGCATCGGAG
CGCGTTTTCTCCGATGCTGGAAACATCATCACCAAAAAGCGAAACCGGCT
TTCGCCTGAGAACGCTAACAACCTCATTTTCCTCATGCGTTTTGAGCGGG
AGAAGGCTCTGGCCAAGGGCTGCAGCTCCCAGGAGGTGCTGGAGTGGTGG
TTGGTTCAACGGAAGTTCTTCCCAACCCTGTACAAGGTCGCGTGCGTCTA
CCTGGCCGCACCGGCGACCTCTGCAGCATCGGAGCGCGTTTTCTCCGATG
CTGGAAACATCATCACCAAAAAGCGAAACCGGCTTTCGCCTGAGAACGCT
AACAACCTCATTTTCCTC
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