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Homology
BLAST of mRNA_D-dudresnayi_contig10584.665.1 vs. uniprot
Match: A0A6H5K1I7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1I7_9PHAE) HSP 1 Score: 337 bits (865), Expect = 4.710e-114 Identity = 165/257 (64.20%), Postives = 201/257 (78.21%), Query Frame = 1
Query: 49 MKGRAARILALEARVLEKRQEVHQVARRQLRQKQSFLSWNFLKTWRTGFEFVKASDTRNRPSDQQLPVRNYSVVDNEIWHRDEMKRWFDMYSSPQAPEEFDSLASGYNFSTDKNETLPPLVRTGRVAMPSWAVAEDRKALAVSQRKRYDAMRLRELPDRHFSDVEGNIQIEKARSAVLASRLKPPKGWGVHHTHVSGFRSPPWKERPPQEAPRYQPPQVARARDDFIQAGGGLEAYQATRVTTKQRVAAMQAGAGVF 819
M+G+ I +LE RVLEKR++VH+ ARR ++KQ FLS NF++TWRTGF +KAS+ NR SD+QLPVR+YS+VDNE+W E++RWFD +SSPQA F+ LASGY S+DKNE LPPL+R RV P WA AEDRK + S+ KR AMRLREL DRHFSD EGN+ +++ARSAVLASRLKPPKGWG HHTHV+GFR+PPWKERPPQEAP Y+PP V R RD +QAGGGLE Y A R TK+R AAM AG+ ++
Sbjct: 1 MRGKKNNIQSLETRVLEKREQVHKTARRLGKEKQDFLSGNFVRTWRTGFNALKASEQDNRMSDKQLPVRSYSLVDNEVWRMPEIRRWFDSHSSPQAIGGFNPLASGYTISSDKNEVLPPLMRIQRVPTPKWAAAEDRKIIEESRDKREQAMRLRELQDRHFSDFEGNLDVQRARSAVLASRLKPPKGWGPHHTHVAGFRTPPWKERPPQEAPSYKPPHVFRDRDFVVQAGGGLETYNANRKKTKRRAAAMTAGSDIW 257
BLAST of mRNA_D-dudresnayi_contig10584.665.1 vs. uniprot
Match: D7FQG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG9_ECTSI) HSP 1 Score: 306 bits (783), Expect = 6.180e-102 Identity = 148/236 (62.71%), Postives = 185/236 (78.39%), Query Frame = 1
Query: 49 MKGRAARILALEARVLEKRQEVHQVARRQLRQKQSFLSWNFLKTWRTGFEFVKASDTRNRPSDQQLPVRNYSVVDNEIWHRDEMKRWFDMYSSPQAPEEFDSLASGYNFSTDKNETLPPLVRTGRVAMPSWAVAEDRKALAVSQRKRYDAMRLRELPDRHFSDVEGNIQIEKARSAVLASRLKPPKGWGVHHTHVSGFRSPPWKERPPQEAPRYQPPQVARARDDFIQAGGGLEAY 756
M+ + + IL+LEARVLEKR++V + ARR R+KQ FLS NF++TWRTGF +KAS+ NR SD+QLPVR++S+VDNE+W E++RWFD +SSPQA + F+ LASGY S+DKN LPPL+R RV P WA AEDRK + S+ KR AMR EL DRHF+D EGN+ +++AR+AVLASRLKPPKGWG HHTHV+GFR+PPWKERPPQEAPRY+PPQV R RD F+Q G A+
Sbjct: 1 MRRKKSNILSLEARVLEKREQVQKTARRLAREKQDFLSGNFVRTWRTGFNALKASEQDNRMSDKQLPVRSHSLVDNEVWQMAEIRRWFDSHSSPQAIDGFNPLASGYTMSSDKNGALPPLLRIQRVPTPKWAAAEDRKIIEKSRDKREQAMRFSELQDRHFADFEGNLDVQRARTAVLASRLKPPKGWGPHHTHVAGFRTPPWKERPPQEAPRYKPPQVFRDRDIFLQVTGPSVAF 236
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 68.2 |
Seed ortholog evalue | 6.9e-09 |
Seed eggNOG ortholog | 44056.XP_009041826.1 |
KEGG rclass | RC00037,RC00041 |
KEGG ko | ko:K00679,ko:K08900 |
KEGG Reaction | R05333 |
KEGG Pathway | ko00561,map00561 |
EggNOG free text desc. | respiratory chain complex III assembly |
EggNOG OGs | COG0465@1,KOG0743@2759 |
EC | 2.3.1.158 |
COG Functional cat. | O |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000,ko03029 |
Hectar predicted targeting category | other localisation |
Exons | 6 |
Model size | 819 |
Cds size | 819 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10584.665.1 >prot_D-dudresnayi_contig10584.665.1 ID=prot_D-dudresnayi_contig10584.665.1|Name=mRNA_D-dudresnayi_contig10584.665.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=273bp
MGGNATAEETRCFQTQMKGRAARILALEARVLEKRQEVHQVARRQLRQKQ SFLSWNFLKTWRTGFEFVKASDTRNRPSDQQLPVRNYSVVDNEIWHRDEM KRWFDMYSSPQAPEEFDSLASGYNFSTDKNETLPPLVRTGRVAMPSWAVA EDRKALAVSQRKRYDAMRLRELPDRHFSDVEGNIQIEKARSAVLASRLKP PKGWGVHHTHVSGFRSPPWKERPPQEAPRYQPPQVARARDDFIQAGGGLE AYQATRVTTKQRVAAMQAGAGVF back to topmRNA from alignment at D-dudresnayi_contig10584:2915..9221- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-dudresnayi_contig10584.665.1 ID=mRNA_D-dudresnayi_contig10584.665.1|Name=mRNA_D-dudresnayi_contig10584.665.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=6307bp|location=Sequence derived from alignment at D-dudresnayi_contig10584:2915..9221- (Desmarestia dudresnayi DdudBR16 monoicous) ATGGGTGGAAACGCTACCGCAGAGGAAACACGCTGCTTTCAAACCCAAAT
GAAGGGTAGAGCAGCACGTATTCTCGCGCTGGAAGCCCGTGTGCTCGAGA
AACGACAAGAGGTGTGAAAGGTCAAATGTGTACTACATAGCAGTAGATAC
CGCTAACTGGCTCTGTCGTTACGACACAATCGTGCATAGCGTTTGCTTTT
CGTCGGTATGGTGGAAAACGACGACACCATAGTTCCTGTACTAATAACAA
ATGTGTGCGTAAGTTTTTTTGGGCTTACACCCCCCTGCTCATACGCAGGT
CTGGTCAAAGCGTCGAAGTCACCGCAGCCTTATCGGGGTCATGACTTCTG
ACTGTTCGCCGTGATATATGTGGCAAGATCACGCTGGGCGCTTAGTCGCA
GCGGTGTCGACAGCAATTTAGGCCAACATTGCCCAGCATGTCAATAGATG
ACGTGTACAAGGTGCAGGTCACAAGAAAAAGCTCGAGTTATTTGCACACA
CACACACACACACACGCACCTGCATATTTTTGCCTCGAATTTTACTACTC
GTACTGGTAGTCTATTGTTGGCATTGTTGTTGTTGTCGTTGCTGTTGTTG
TCTTTACATTAAAAAAAGTCGACATTTCTTACTTCTGCCGAAAAACAACC
AGCGGCATACTCAGAGCATACATTGAGAATATTTTATTCTAAGAGTAGAG
AGACAGATGGAACGCGAGAAGATAAGGGCAAAGCAAGGAAGGGGTAGAAA
GGAGATAAAAAGGAGAAGAAAAAAAACGAAAAACGAACGTAGGGATTACA
GTAAGTGTGTAACAGAAGACGGACGGGACACACGGGGGATGAGCTACGAT
AAGCAAGATCAACCCCGCCTTCACTCTGCTACTCGCAATCAATTGAAATC
GCGTGACCTGATCCGCCATCTTCGTCCTACTCTAGTCGGCAGCAGTAGCA
ATATTACTGATGCCCCCCCCCCCCCCCCCCTCCCGCTCCCGTTATGGGTT
TACTCGGTCCCTTTCGAGTGGCGTGCACTACTCCTCGTCGCCCCCTCTCT
GTGCCGCGTCTCCATGAAGTGGTCTCCCGCCAGAACTCCCTTGTAGCATT
TCCCCCATTAAATGGACAAATACAGAGCGACCGCACTCGTAGCCGATGCA
GGCAAAGTACTGGCGAAAATTGTCTCAGCCCACCTCAGTTCCCGCAATGC
GAGTTTCGCGGGGCAAAATCAACCGTTGGCATGCTGATTGTAGCACACCA
CCCACAGCAGCTCGGGCGGGAGAGAAAATCCCCTTGTACGCGTGCTTCAT
CGACCTCCAGAAGGTGTATGACGCCGTCGATCGAAAGCTTCTCTAGAAGT
TGCTTCGTCGTTTCCACATACTGGGCCCGATGCTCGCAGTCATCCGCCAG
TTCCATGACGTACGCGGGCGACGGCAAATCCTCTGAGTGGTTCGATGCCA
CACAGGGGCTACAGTAAGGACGCGTGATATCGCCTCTGTTGTTCAATATA
TTCTGAACCGTGGTGTACACGTCGTTCTGGTGCACTTTACGAGGACGTTG
GCATGCTTGCCGACCTGGTTCACCCCGAGGAGGACGGAGAGGGGATACCA
CCCAGCCACCGCTAGAACGTGTACGAATGGCAATATGGAGCAATGATATA
TGTAGATAACGCCGGTATTGTATCTACATCATCGGAAGGCCTCGCGAAGA
TGATAGCGGCCATTGCGACAGTCGTCGAGGCCGTAGACCTTATCGTGTCG
GAGAAGAAAACGGAGACCGTGATGGTACGGACATCGAAACAGGCACCTCG
ATCCTCACCGTCTGCCGTCGAAACAACCGACCAGAAACTTAAAGAGACCG
GCCAGTTTGCAAAACTGGGTGTTACTGTCGACAAAAGCGCCGACATCATG
ATTGATATCGAAGCCCAGGTTCAGCTCGCATGGAGATGCCTCAGAAGGCA
ATGCCGGGAGTTTTATGACCGACCGGCCGACTGACCGACGGACCGACCGA
CCGTAACTTTTATGCTAACGGTGCGTATGTTAAGGACGAAGTGATGGAAA
CCTTGTACGGATGCGTGATGTGGACACTCGGCCAACAGCACTATGCCAAC
TCCGAACGGCATATCACCACCTCCTCCTGCGCGTCATCGGTTTCCAGCGT
CCACGACACACGGACCTTCTGGTGTCGTACGGGCAGGCCTTCAATGAAAC
TCGAGAGCGTCGAAGCGGGTGATGTTCAGGACACTGCCCGGTGGGCAGAA
CCCGGGACGACGTAGACCGGTCAAAACCTGGATGAGCCGTTTCTTAAATG
ACCTCAAAGCGTCCCGTGCCATTACCGCGGAGTCAACGGACAATCGCGAA
TTGATTTTTGGAGTTGAAACTGCCCTATAGATACAGCGATCATCGAATCG
AATGGGGAATGTTGTATAGGGGGGTCTTAAAGGGAGCTGAATGTTGATGG
AGACATCGCACAGAGAATAGCGGGGAGGAACAGTACATGCCCCTGGAAAG
AGGTTGAGAAAGCCCGAAGTACCAATAACGGGAAAAGGGGGGGGCAACGT
GACAGTAGCAACAATATTACTACTGTTGCCGATGAGAGTAGGAAGGAGGT
GGCGGACCGAGTAGCAAGGTTTCGATGTGACTACGAGTAACAGAGTGAAG
GTAGAACCGATGGTGTTGCATAGTTCTTCTCCCGTATGCGCCAGTATCTA
ATCTGCTGTTGTAGTGCTAGACTACGCTCACAGTCCCAGTTACGCTTACG
TTTGTTTTTCTTCTTGTTATTTTCCTTATTGTTGATCCCGTTCTTGTTGT
GTCCTACCACCAGTTCTTCTCAGTTTTCTTGCGGTACTGCTTTAATCTAT
TTTTCTCATAATTATTTTTCCTATTTGTTTTGTTCAATTTGTGATTTGGT
GCTCTAGGTAGCTTGTGACCACATAATTTCGTACCAATATCTCTCTAGGA
TGGAAGTATCAGTACAGACCCTGAGTACTGCTGGATGTCACAGGCTAGAA
AGGGTGTCTTTATTATGTGAAAACAACAACAACAACAACAACAACAACAA
CAACAGTCACTCTATTCCGTAGTACAGCTTCAGCTTCAAAACCCAGTGGG
GGGTTCTCCGTCGATTCCTCGGTGATGGCACGGAAAACATGGAGATCGTC
TGATAGATATTGGCTTCAGGCCTGTTTGGCCCAACCAACGGCCCCCACAA
ATAACAGTCGCCGTTTAAGGGTAGTCGTTTTGACGATCTTGCATTGGATC
TTCTTGAGGCCCTTCGCATACGACATCAGGTGACCGGTGCGCGGTCGGTG
TTGGTAATCAACGACTCGTCAGGAGGAGGAGGTGGTGATGGTGGTGTGCC
GTTAGGAATTTAGCGTGGTGCTGTTGGTCGAGTGTCCACGTCACGCATCC
TTAGAACATGGTTTCCATCACTTCGGCCTTTAGCACGTGCACCTTCAACA
CATTCTTGAATGCGGACGGCCAATCGGTCGGTCGGTGGTATAATTGTCAG
CTTTACGTTCTGAGGCATGAACACGCGAGTTAGATCCGGTGCTCGATCTC
AGATGTGATGTCGGTGCTTTCGTTGACGGTATCCAGCTATACAAACTGGT
TTGTCTGTGTATACTTCTGGCTGGCTGCTTCGACAACCAACGGTGCGGAC
TGAAGTGCTTGCTTCGGTGTCTGTACCATCATTTTCTCCGTGTTCCTCTC
TGACGTGGTAAGGCCTGCGGTCTCGAAGACTGTCACAATGGCCGTCATCA
CGTTCGCGAGGCTGTTCGAAGAGTAACATACAATGCCGGTGTCATCGGCG
TATATCATGCTGCATAACACGCCCGGCACGCGTTCTAGCGGTGGCTCGTT
GGTATCCCCCACCCCCGTCCTATTCGAGGTGAACCAGGCCAGCAAATACG
TGCACGTCGTTACTAAAGCGCACCAGAAGAACGACGGGTTCCACCGTGGT
AGAAATAAATCTCGAACAGTAGAGGCGACACGACTGAATAATTCATGTAC
AAAACGTCGCACTAATAGCTCTTCTGCAGTGGTGCACAAGGGCAGTATCA
TATATGTGCTTCTACACTTAGTAACAAACGAGACAGAGCGGCATCTACGT
CCGATGTTGCCGTGTTTGTTATGTGGCAGGTGCATCAAGTGGCAAGGCGG
CAACTTCGACAAAAGCAGTCTTTCCTAAGTTGGAATTTCTTGAAGACGTG
GCGAACGGGATTCGAATTCGTAAAGGCCTCCGACACCCGCAATAGACCTA
GCGATCAGCAGGTAACGTGCCACAGGATGGCTACCGAACATGGTTCATGA
CGCATGTACAGCGCATCGCTTTGAACATTTCCTCTGTGGGACAAATATTT
CTGTTGTGTTGATACGCCATTACCCTGAATCGCACAGGCAGCTACTGTAT
TAGACGTGACCGGGTTATCATGCTTGTCATCTGTGATTTGCTTCGTTTGG
CTGGTATATTCAATCGCTGCATGCGTCGTGCTTTCGTATCTCGTATCGAC
GAGGACATCTCTGACGCTGTAGCCCGTACGGTATAATGCTACTTTATAAC
GCCTTGATTAATTCGCGAAATCTCAAATTGTGTGCGTTCTCGTCCAGCTT
CCTGTACGTAACTATTCTGTGGTGGATAACGAGATATGGCACAGGGACGA
GATGAAACGATGGTTCGACATGTACAGTTCGCCGCAGGCACCGGAAGAAT
TTGACTCTTTGGCTTCTGGATACAACTTCTCGACCGACAAGGTGCGATGA
AACATCTCGTAGTGGTGGGTCTGTTGGCGTGTTCTGCCACTTTCTTCGTA
CGCAAAGCATCGCATGAATTACATCTTTGTCTCGTGTTCGTGTGCTTTCC
AGAACGAAACGTTGCCCCCGCTCGTGCGGACTGGCCGTGTTGCAATGCCC
TCATGGGCCGTGGCGGAAGACAGAAAAGCTCTGGCGGTATCTCAGAGGAA
ACGTTACGACGCGATGCGTCTGAGGGAGCTGCCCGACCGGCATTTCTCTG
ATGTCGAAGGCAATATACAAATCGAAAAAGCAAGAAGTGCAGTACTCGCA
TCGCGATTGAAACCGCCCAAGGGCTGGGGAGTGCACCACACCCACGTATC
GGTGAGTTCATCTAGCCGTATGACTGGCACGAAACCACAAAAGCCAATAC
GCCTTTATAATCCAGTGCTCTCCGTTGTCCTCGACATAGATGAAATGCTG
CGAAGTCGTTCCAGTGGTCAGCGTATGTGCCCCAAAGCACAGCGGTTGTA
TGATATATATCGAATCTCTCCTTACTACTCCAATATTTTATCTGGAACAA
CGGTAGCAACCATGTGTACTCCGCAAAGTATAGTTGTACAAACCATTGTC
CGAAACATGGCGAATCAACCCTTCGACGTATGCTTTTTTTCTCAAGGATC
CCCGCAAATGATCAACCTCATAGACTAATTTCTGAGTGGATCTGATGTTT
CCTTTGTTTTCGCCATTTGGGGCTCCCATGCTTTCGAAGCCATGCGCCAC
TCGTAGTTGCTTTTGATTAGAGTATATATCTACACTTAGACACAGGCGAC
GGGTAATAAAAAAACATTGTGAGCCCCGCGATCGAGAGCTCGAAGTTCCA
ATATGCGCCTTTATTCTGAAGGTTAGGACGCGCCCTTGACCGTGTTTCTG
GCACTTTTTAGTGTTGTGCGTTCCTATGTATTACCCGGTATATTGTTGCA
ATTGCTCATTTTGTAAGGAAAATAAAATTAGCTACCATATCCCCCGTTGT
CAGAGCGACTTTAAGAAATGATCAGCTTTCCAGTGTCGCGGTATTTGGCG
CTACTTCCACATCTTGCCGGCTCCTACCGACGTAAGGTTGCGATACCATA
TCCAACCCTAACAACCCCCTCGACATTTCGACCCAAGATACGTTTTGCTA
AACCGCTCACGATATATGGAGGAGACGAAGCCTGGCCCTAAACCCCACGG
CAACCACTCGAAATATCGTTTTTACCGCCGTATGATATGGCATAGGGGTT
TCGGTCTCCACCTTGGAAGGAACGGCCTCCGCAAGAAGCCCCACGGTACC
AACCTCCACAAGTTGCTCGAGCCAGGGACGACTTCATACAGGTGCGATTC
GTGTGGTCGCCTGGTAGGTTGAGTGCGTGCCTTATAATAGAGAGTAGTGC
GTCCAGCCGATGGAAATCACTCAGTTTGCTCTAAATGCCGGGTTCGTCCA
TTGCAAAACCCTTCGCGCAGGCCGGCGGAGGGTTGGAAGCATACCAGGCC
ACCCGGGTGACAACCAAACAGAGGGTTGCAGCGATGCAAGCTGGAGCTGG
AGTATTT back to topCoding sequence (CDS) from alignment at D-dudresnayi_contig10584:2915..9221- >mRNA_D-dudresnayi_contig10584.665.1 ID=mRNA_D-dudresnayi_contig10584.665.1|Name=mRNA_D-dudresnayi_contig10584.665.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1638bp|location=Sequence derived from alignment at D-dudresnayi_contig10584:2915..9221- (Desmarestia dudresnayi DdudBR16 monoicous) ATGGGTGGAAACGCTACCGCAGAGGAAACACGCTGCTTTCAAACCCAAAT GAAGGGTAGAGCAGCACGTATTCTCGCGCTGGAAGCCCGTGTGCTCGAGA AACGACAAGAGATGGGTGGAAACGCTACCGCAGAGGAAACACGCTGCTTT CAAACCCAAATGAAGGGTAGAGCAGCACGTATTCTCGCGCTGGAAGCCCG TGTGCTCGAGAAACGACAAGAGGTGCATCAAGTGGCAAGGCGGCAACTTC GACAAAAGCAGTCTTTCCTAAGTTGGAATTTCTTGAAGACGTGGCGAACG GGATTCGAATTCGTAAAGGCCTCCGACACCCGCAATAGACCTAGCGATCA GCAGGTGCATCAAGTGGCAAGGCGGCAACTTCGACAAAAGCAGTCTTTCC TAAGTTGGAATTTCTTGAAGACGTGGCGAACGGGATTCGAATTCGTAAAG GCCTCCGACACCCGCAATAGACCTAGCGATCAGCAGCTTCCTGTACGTAA CTATTCTGTGGTGGATAACGAGATATGGCACAGGGACGAGATGAAACGAT GGTTCGACATGTACAGTTCGCCGCAGGCACCGGAAGAATTTGACTCTTTG GCTTCTGGATACAACTTCTCGACCGACAAGCTTCCTGTACGTAACTATTC TGTGGTGGATAACGAGATATGGCACAGGGACGAGATGAAACGATGGTTCG ACATGTACAGTTCGCCGCAGGCACCGGAAGAATTTGACTCTTTGGCTTCT GGATACAACTTCTCGACCGACAAGAACGAAACGTTGCCCCCGCTCGTGCG GACTGGCCGTGTTGCAATGCCCTCATGGGCCGTGGCGGAAGACAGAAAAG CTCTGGCGGTATCTCAGAGGAAACGTTACGACGCGATGCGTCTGAGGGAG CTGCCCGACCGGCATTTCTCTGATGTCGAAGGCAATATACAAATCGAAAA AGCAAGAAGTGCAGTACTCGCATCGCGATTGAAACCGCCCAAGGGCTGGG GAGTGCACCACACCCACGTATCGAACGAAACGTTGCCCCCGCTCGTGCGG ACTGGCCGTGTTGCAATGCCCTCATGGGCCGTGGCGGAAGACAGAAAAGC TCTGGCGGTATCTCAGAGGAAACGTTACGACGCGATGCGTCTGAGGGAGC TGCCCGACCGGCATTTCTCTGATGTCGAAGGCAATATACAAATCGAAAAA GCAAGAAGTGCAGTACTCGCATCGCGATTGAAACCGCCCAAGGGCTGGGG AGTGCACCACACCCACGTATCGGGGTTTCGGTCTCCACCTTGGAAGGAAC GGCCTCCGCAAGAAGCCCCACGGTACCAACCTCCACAAGTTGCTCGAGCC AGGGACGACTTCATACAGGGGTTTCGGTCTCCACCTTGGAAGGAACGGCC TCCGCAAGAAGCCCCACGGTACCAACCTCCACAAGTTGCTCGAGCCAGGG ACGACTTCATACAGGCCGGCGGAGGGTTGGAAGCATACCAGGCCACCCGG GTGACAACCAAACAGAGGGTTGCAGCGATGCAAGCTGGAGCTGGAGTATT TGCCGGCGGAGGGTTGGAAGCATACCAGGCCACCCGGGTGACAACCAAAC AGAGGGTTGCAGCGATGCAAGCTGGAGCTGGAGTATTT back to top
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