mRNA_D-dudresnayi_contig10573.646.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10573.646.1
Unique NamemRNA_D-dudresnayi_contig10573.646.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10573.646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10573contigD-dudresnayi_contig10573:1330..4106 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size658
Cds size657
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10573.646.1prot_D-dudresnayi_contig10573.646.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10573 1330..4105 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927561.7082715-CDS-D-dudresnayi_contig10573:1329..13801622927561.7082715-CDS-D-dudresnayi_contig10573:1329..1380Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10573 1330..1380 +
1690556808.1129186-CDS-D-dudresnayi_contig10573:1329..13801690556808.1129186-CDS-D-dudresnayi_contig10573:1329..1380Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10573 1330..1380 +
1622927561.7192326-CDS-D-dudresnayi_contig10573:2616..28431622927561.7192326-CDS-D-dudresnayi_contig10573:2616..2843Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10573 2617..2843 +
1690556808.1288981-CDS-D-dudresnayi_contig10573:2616..28431690556808.1288981-CDS-D-dudresnayi_contig10573:2616..2843Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10573 2617..2843 +
1622927561.729789-CDS-D-dudresnayi_contig10573:3726..41051622927561.729789-CDS-D-dudresnayi_contig10573:3726..4105Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10573 3727..4105 +
1690556808.143273-CDS-D-dudresnayi_contig10573:3726..41051690556808.143273-CDS-D-dudresnayi_contig10573:3726..4105Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10573 3727..4105 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10573.646.1

>prot_D-dudresnayi_contig10573.646.1 ID=prot_D-dudresnayi_contig10573.646.1|Name=mRNA_D-dudresnayi_contig10573.646.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=219bp
AAVAGEGSNDDGAAPFEVFFDPDGSLGRAAALERDSNALSFSGNPEDGGL
GSSGHNSSSDGGGGSDGRGSCSGDPDSDDENRENLGCPSNPFPRDVRHPG
VEESVFRELEIPAHRPSDSDEDESESGRSGSGSGGSSTEPVSNSEDGDRE
GGGALDGSGVCSGDSAVQRGRRHEPDEAAEEGDFSKENYVGDGVVTTRGL
RDRIRGAGGAGGGGGRGRG
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mRNA from alignment at D-dudresnayi_contig10573:1330..4106+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10573.646.1 ID=mRNA_D-dudresnayi_contig10573.646.1|Name=mRNA_D-dudresnayi_contig10573.646.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2777bp|location=Sequence derived from alignment at D-dudresnayi_contig10573:1330..4106+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCCGCCGTTGCGGGTGAAGGGAGCAATGATGATGGAGCCGCTCCTTTTGA GGTGAGGGTTTTCGATGATATAGAGGGGTCGGGGGGGTACTCATTTGGTA GGGGGGGGGGGCGCTCATTTGTTGCTTGCCTTAGTCATTTATCATGGACC ACGCATCCTTTTCGAGACGGTGCTAGGGTGGGGGCGGGGGCGGGGGCGGG GAGGCGTACTGATTTTTGTTGCTTGCCTTAGTCAGTTTTTTTCCGTTGAC CACGCATTCCTTTCGAGACGGAGCACCGTTTCTACTCCTAATAGAGACAC CTCCAACATTTGGGCGCTCTTTACGGTTTTTCGGTATCTTACATAAAAAC GTGGCTCGGGGGGGGGGGCATGGTCGTACCACAGTGGTCATATTATTGCT CCTCTGAAGCCGGCATGCAGATTGTTTGTATTGTATTGTTGTCCTACTTA TGCGTGTTGTCGCATGCCGTGGTTATCACATGATCAACTCACCTGTGATA CGCATATAGACTAATTTGATGCATGATGATATAATACACCCGCAATGTGG TATGATATGGTACGAAGTGTGTGATATGATGTGATGTGATGTGATGTGAT GTGATGGAATAATCCTCGGTTGTGTACGTCATGTTGTATAAGTTGAGGAT AACATTTGTGTTTGTAAATGTGTGCTGCACCGCCTGCTGCACTACATCTA CGACCGAAGTATCACACAGTGAGATTGCCGATTATCCCCTGGCCACCGAA CCAGCTTGCAACGTCACGGCCGACTCCATGTATTCTATGTATTTGTAATT AATATTTACGAGCGAAGCGAATTTCTAATTTCGGGCGGCGCCAAAAATAA AAAATACAAGGTGCCCTGTATCACGGCTAATTCTATGTTTATTATTAGTT TATTTTTTGTTCTCTGTCCCATTTATTACCTTCCCCCTATATTCTTTCTC TAGCTCAATCTTCCTTCGTACTCAGATCCGGGGTCACATAGTAGGCGCTC GCTCCTCCCGCCTTCCCACTACGGTACGTGCCTACATTTGTATCGCGAGA AGAGTGCAGCACTTTATTCCCTCGTCGCCTTTCGTCGAATTGTGCTTACT CACGCTCTCCTCGCGTTTTCCGCGACGGAAGATTGCACAGAAAAAGTGCA ATTTTGTTTTCACCGAGACTCGAACGCCGAACTTCCGCCAACAGCGTCGA CCACCTTAAGGTCATAGACCATAGCGTCACCCATTGGATCTATGTATTTG TAAATAATAATAACCAATGTTTCGGCGTTTTTTTCAGGTGTTTTTCGATC CTGACGGGTCCCTAGGAAGAGCCGCTGCACTCGAGCGTGACAGTAACGCC TTATCGTTTTCTGGAAACCCGGAAGACGGCGGCCTGGGCAGCAGTGGACA CAACAGCAGCAGTGATGGAGGAGGCGGCAGTGATGGCAGGGGATCGTGCT CTGGCGACCCGGACTCTGACGATGAGAATCGGGAGAACCTGGGCTGCCCG TCGAACCCTTTTCCGTGAGTTCTCTGATGTATATCGTGGAAGGCGTTTTT AGCCCGGGATTGTTACGGCGCTGACTGAATAGCTCAGTGGTTATGGTGTT ATCCTAACAAAAGCACAATCTGGGGTTCAAATCCCGGCTTAAATCTTCTT AGATTGTTTTTCTTTTTTGGTGGAAATTAAGGAGGTACACTGCTGAAAGT CGCGGTATACACCTCCTGGCAAGAAGATGGCTCATGTCCCAAGTAGTTTT TTACCAATCCTTCGACAACCAAAATACTGATTTTTCTTTGGTCCAACAAC AAATTTTCTTTGTTTTGATTGGGTTAGAGTTTGTCCGCTTTTGTTAGTAC GCAGTAATATATGATACACAGTGTATATCAACCATATTTGTCAAAGAATT GGTAAACAAGCCTCCATATCCCCGCCCAGTGAGGGGCAGCGTTGACTAGA GGGATTGCGACCCTTGGGTAAAATATGAGGTTCCGGCTTAACAGCCAGAC GGACCTCAGATTGAGATTTTGTTAGGATAACACCGCATTCACTTAGATAT TCAGTCAGCGCTTACTGAATAGCTCAGTGGTTATGTGTAACTCTTGACAC GGGTACCCCCGGGTTTACCGGAGGCGTTCCGGGTCGGGGACCCCGGGGAT ATGTAAGGGACCAAAAACCAATACTTTATTGAAGTAGTTAGTGGGACAGA CTTTCGAAGTGTATTTTAACGTACTTGCTTTATTCGAAACATACATTGTG CTCGTTTTTTTGGTGTTGTATCGTTCAGGGTACTCTGATATGGAGCTGTT GTAGAGATATGGAGGAGGCGAGGCTTTATGTGTCTAACATTTGTTTTACG ATGGTGCGCCACGGACCAATTCCCAATTGGTGTTGTTGTCTTAACAGGCG TGACGTTCGCCATCCGGGAGTGGAGGAATCCGTTTTCCGCGAGCTCGAAA TTCCGGCTCACCGACCTTCCGATTCGGACGAGGACGAATCGGAATCCGGC AGAAGCGGCAGTGGAAGCGGTGGAAGCAGTACCGAACCGGTTTCTAATTC GGAAGATGGTGACCGAGAAGGAGGAGGTGCGTTGGACGGGAGCGGTGTTT GTAGTGGCGACAGTGCCGTCCAACGTGGGCGTCGTCATGAGCCTGACGAG GCAGCAGAAGAAGGAGATTTTTCGAAAGAAAATTACGTGGGTGACGGTGT AGTAACGACGAGAGGGCTGCGCGATCGCATTCGGGGCGCGGGTGGAGCAG GAGGAGGAGGGGGGAGGGGACGTGGCG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10573:1330..4106+

>mRNA_D-dudresnayi_contig10573.646.1 ID=mRNA_D-dudresnayi_contig10573.646.1|Name=mRNA_D-dudresnayi_contig10573.646.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1314bp|location=Sequence derived from alignment at D-dudresnayi_contig10573:1330..4106+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCCGCCGTTGCGGGTGAAGGGAGCAATGATGATGGAGCCGCTCCTTTTGA
GGCCGCCGTTGCGGGTGAAGGGAGCAATGATGATGGAGCCGCTCCTTTTG
AGGTGTTTTTCGATCCTGACGGGTCCCTAGGAAGAGCCGCTGCACTCGAG
CGTGACAGTAACGCCTTATCGTTTTCTGGAAACCCGGAAGACGGCGGCCT
GGGCAGCAGTGGACACAACAGCAGCAGTGATGGAGGAGGCGGCAGTGATG
GCAGGGGATCGTGCTCTGGCGACCCGGACTCTGACGATGAGAATCGGGAG
AACCTGGGCTGCCCGTCGAACCCTTTTCCGTGTTTTTCGATCCTGACGGG
TCCCTAGGAAGAGCCGCTGCACTCGAGCGTGACAGTAACGCCTTATCGTT
TTCTGGAAACCCGGAAGACGGCGGCCTGGGCAGCAGTGGACACAACAGCA
GCAGTGATGGAGGAGGCGGCAGTGATGGCAGGGGATCGTGCTCTGGCGAC
CCGGACTCTGACGATGAGAATCGGGAGAACCTGGGCTGCCCGTCGAACCC
TTTTCCGCGTGACGTTCGCCATCCGGGAGTGGAGGAATCCGTTTTCCGCG
AGCTCGAAATTCCGGCTCACCGACCTTCCGATTCGGACGAGGACGAATCG
GAATCCGGCAGAAGCGGCAGTGGAAGCGGTGGAAGCAGTACCGAACCGGT
TTCTAATTCGGAAGATGGTGACCGAGAAGGAGGAGGTGCGTTGGACGGGA
GCGGTGTTTGTAGTGGCGACAGTGCCGTCCAACGTGGGCGTCGTCATGAG
CCTGACGAGGCAGCAGAAGAAGGAGATTTTTCGAAAGAAAATTACGTGGG
TGACGGTGTAGTAACGACGAGAGGGCTGCGCGATCGCATTCGGGGCGCGG
GTGGAGCAGGAGGAGGAGGGGGGAGGGGACGTGGCGCGTGACGTTCGCCA
TCCGGGAGTGGAGGAATCCGTTTTCCGCGAGCTCGAAATTCCGGCTCACC
GACCTTCCGATTCGGACGAGGACGAATCGGAATCCGGCAGAAGCGGCAGT
GGAAGCGGTGGAAGCAGTACCGAACCGGTTTCTAATTCGGAAGATGGTGA
CCGAGAAGGAGGAGGTGCGTTGGACGGGAGCGGTGTTTGTAGTGGCGACA
GTGCCGTCCAACGTGGGCGTCGTCATGAGCCTGACGAGGCAGCAGAAGAA
GGAGATTTTTCGAAAGAAAATTACGTGGGTGACGGTGTAGTAACGACGAG
AGGGCTGCGCGATCGCATTCGGGGCGCGGGTGGAGCAGGAGGAGGAGGGG
GGAGGGGACGTGGC
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