prot_D-dudresnayi_contig9983.28792.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9983.28792.1
Unique Nameprot_D-dudresnayi_contig9983.28792.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length197
Homology
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A6H5JK68_9PHAE (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK68_9PHAE)

HSP 1 Score: 339 bits (870), Expect = 2.380e-110
Identity = 162/197 (82.23%), Postives = 181/197 (91.88%), Query Frame = 0
Query:    1 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 197
            MDIH+GG DLKFPHHDNE+AQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHS+ Q +RLLFLLHKYNTPMDYGDDAM+GAL AE+ F+EFFHNVKAALRR+T+++P R  EPELTL + L ++K EV++CLCDDFDTPGA+ ALQELVK VNKY+ AKE+AGE IVADCVRGAAEYVTKIFKV
Sbjct:  273 MDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSSRQ-IRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELTLMSSLSDAKKEVKKCLCDDFDTPGAMGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKV 468          
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A835Z463_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z463_9STRA)

HSP 1 Score: 253 bits (646), Expect = 2.700e-77
Identity = 129/198 (65.15%), Postives = 150/198 (75.76%), Query Frame = 0
Query:    1 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVAL-QELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 197
            MDIH+GG DL+FPHHDNEIAQAEA Y+C QWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQ H+A Q +R+ FLLHKYN PMDYGD+ MAGAL  E+ F EFFH VK+ +R +T+ + +R+ E E+ L  KL E K  VR  LCDDFDTP A+  L  +LV+ VNKY+  K  AG       VR A EYVT+IFKV
Sbjct:  266 MDIHSGGVDLRFPHHDNEIAQAEAHYNCAQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQTHTARQ-IRMCFLLHKYNDPMDYGDNTMAGALAIERTFVEFFHAVKSVVRAATAVDELRLGEGEIALYRKLEECKSGVRAALCDDFDTPTAIKLLASDLVRTVNKYIQEKTDAGLKSHYIVVRTAGEYVTRIFKV 462          
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A7S3XKM0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKM0_HETAK)

HSP 1 Score: 229 bits (583), Expect = 5.080e-72
Identity = 117/196 (59.69%), Postives = 138/196 (70.41%), Query Frame = 0
Query:    1 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFK 196
            MDIH+GG DLKFPHHDNE+AQ+EA   C QWVNYF+HTGHLHIKGFKMSKSLKNFITI+QAL+ H+  Q +RL+FL+ KYN PMDYGD  MAGAL  E+ F E+FHNVKA LRR     P +    E+ L   L E+K  V   LCDDFD P A+  LQ+LV+A N YL         +V    R AA+YVTKIF+
Sbjct:   23 MDIHSGGVDLKFPHHDNEMAQSEAHAGCRQWVNYFVHTGHLHIKGFKMSKSLKNFITIRQALETHTPRQ-IRLVFLMSKYNAPMDYGDSTMAGALSIERSFAEYFHNVKAVLRRDGVAGPQKWGAREVALGRALSEAKAGVHAALCDDFDCPSALKELQKLVRASNVYLEGNAAPATLLV----RAAAQYVTKIFR 213          
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A7S1Y9A2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9A2_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.030e-66
Identity = 114/197 (57.87%), Postives = 142/197 (72.08%), Query Frame = 0
Query:    1 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 197
            MDIH+GG DLKFPHHDNE+AQAEA   C QWVNYF+H GHLHIKGFKMSKSLKNFITI+QAL+++SA Q +RL FL+HKYN+PMDYGD+ M+ A+ AEK+F EFF N KAALR +  K+  +       LQ  L +++  V   L DDFDTP  + AL +LVK+ N Y+   +   ETI +  +   A YVT+IFKV
Sbjct:  126 MDIHSGGVDLKFPHHDNEMAQAEAHSGCTQWVNYFVHAGHLHIKGFKMSKSLKNFITIRQALEQNSARQ-IRLCFLMHKYNSPMDYGDNTMSHAMTAEKLFKEFFLNTKAALRATAMKDSKKWTPATKDLQKTLHQTQAAVDVALKDDFDTPAVMSALADLVKSTNSYM---QDNVETINSLLLNNVAAYVTRIFKV 318          
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A6U0T1A9_9STRA (Cysteine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0T1A9_9STRA)

HSP 1 Score: 221 bits (564), Expect = 2.130e-65
Identity = 116/197 (58.88%), Postives = 137/197 (69.54%), Query Frame = 0
Query:    1 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 197
            MDIH+GG DLKFPHHDNE+AQAEA   C QWVNYF+H GHLHIKGFKMSKSLKNFITI+ AL+ ++A Q +RL FLLHKYN PMDYGD+ M+ +L  EK+F EFFHNVKA LR     N  R  E    LQ  L + K  V   L DDFDTP ++ AL +LVKA N YL +      T V   +R AA Y+T IF++
Sbjct:  272 MDIHSGGVDLKFPHHDNEMAQAEAHSGCNQWVNYFVHAGHLHIKGFKMSKSLKNFITIRDALENNTARQ-IRLCFLLHKYNAPMDYGDNTMSHSLVTEKLFVEFFHNVKAVLREGNIINIQRWDESARQLQNTLSDIKSRVDAALRDDFDTPASINALSDLVKATNLYLDSCVARQITPVNLLLRNAAVYITHIFRI 467          
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A5D6YDM0_9STRA (Cysteine--tRNA ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDM0_9STRA)

HSP 1 Score: 222 bits (565), Expect = 2.780e-65
Identity = 111/197 (56.35%), Postives = 147/197 (74.62%), Query Frame = 0
Query:    1 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 197
            +D+H+GG DL+FPHHDNEIAQAEA +D  QWVNYFLHTGHLHI+G KMSKSLKNF+ I++AL+++S+ QL R LFLLHKYN PMDY D++M  A+G ++ F+EFF NVKAALR   +    +    E  L A LLE+K+ V + L DD +TP A++ LQ+L K VN+Y+ +   AGE +V+  +R AAEY+T I +V
Sbjct:  308 IDVHSGGIDLRFPHHDNEIAQAEAYFDFPQWVNYFLHTGHLHIEGLKMSKSLKNFVKIQEALRDNSSRQL-RFLFLLHKYNVPMDYNDNSMDEAVGVDRFFSEFFQNVKAALRALGADKTQKWTPREKKLSAALLEAKERVHQALADDLNTPAALLHLQQLAKEVNRYMAS---AGE-LVSMIIRSAAEYITHILRV 499          
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A7S3L6K9_9STRA (Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6K9_9STRA)

HSP 1 Score: 219 bits (559), Expect = 9.810e-65
Identity = 117/198 (59.09%), Postives = 142/198 (71.72%), Query Frame = 0
Query:    1 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALR-RSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 197
            MDIH+GG DLKFPHHDNE+AQAEA+    QWVNYF+H GHLHI+G KMSKSLKNFITI+QAL+ +SA Q +R+LFLLHKYN PMDYGD+ ++ A+ AEK FNEFFHNVKAALR +   +   R     +TLQ  L + + +V   L DDFDTP A+  L +LVKA N YL   E     +V   VR  A Y+TK+FKV
Sbjct:  266 MDIHSGGVDLKFPHHDNEMAQAEAECGHPQWVNYFVHAGHLHIQGLKMSKSLKNFITIQQALEMNSARQ-IRMLFLLHKYNAPMDYGDNTLSRAVVAEKSFNEFFHNVKAALRSKDMMEQDQRWTPAAVTLQQTLTDVQAKVGAALRDDFDTPTAMTKLGDLVKATNVYL---ETETTQVVGLVVRSVASYITKMFKV 459          
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A812UK10_SYMMI (Cysteine--tRNA ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UK10_SYMMI)

HSP 1 Score: 218 bits (555), Expect = 2.690e-64
Identity = 109/196 (55.61%), Postives = 140/196 (71.43%), Query Frame = 0
Query:    1 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFK 196
            +D+HAGG DLKFPHH+NEIAQ+E   D  QW+NY+LHTGHL+IKGFKMSKSLKNFITI+QAL+EHSA Q +R  FLLHKYN PMDYGD  M  A+  EKIF+EFFHNVKA LRR     P  + + ++ L      +K+ VR  LCDDFDTP AV  L++L++ VNKY+    ++G  + +  +   A Y+T + +
Sbjct:  254 IDVHAGGVDLKFPHHENEIAQSEGCLDSHQWINYWLHTGHLNIKGFKMSKSLKNFITIRQALEEHSARQ-IRFCFLLHKYNAPMDYGDGTMTQAVNMEKIFSEFFHNVKATLRRVGVAGPQHVGQRDVALMQFQEATKENVRAALCDDFDTPTAVGHLKDLIREVNKYI----ESG-VVGSAVLSSTARYITSVLR 443          
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A7S1XX51_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX51_9STRA)

HSP 1 Score: 212 bits (539), Expect = 4.060e-64
Identity = 109/197 (55.33%), Postives = 133/197 (67.51%), Query Frame = 0
Query:    1 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 197
            +DIH+GG DL FPHHDNE+AQ+EA Y C QWVNYF+H+GHLHIKGFKMSKSLKNFITI  AL+E S+ QL R LFL H+YN PMDYGD  M G L  E+ F EFFHNVKA LR   +  P    + E+  ++ LL  K +V   LCDDFDTP  +  L  LV+  N Y    E A    V   ++ +A Y+TK+F+V
Sbjct:   15 IDIHSGGVDLVFPHHDNEMAQSEAYYGCRQWVNYFVHSGHLHIKGFKMSKSLKNFITIGAALEEQSSRQL-RFLFLKHRYNQPMDYGDATMQGVLDMERTFVEFFHNVKATLRALPATGPQFWRQKEIAFESALLAIKQQVHDALCDDFDTPTVLQILLRLVRITNVYSKVFEPAPP--VPLIIKESARYITKMFRV 208          
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A7S1FUV2_9STRA (Cysteine--tRNA ligase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUV2_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.630e-63
Identity = 118/197 (59.90%), Postives = 143/197 (72.59%), Query Frame = 0
Query:    1 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 197
            MDIH+GG DLKFPHHDNE+AQAEA+    QWVNYF+H+GHL IK  KMSKSLKNFITI+QALQ ++A Q +R+LFLLHKYN PMDY DD MA A   EK F+ FF NVK ALR ST +   +  E E  L   +  ++  VR+ L DDFDT  A+ ALQ+LVKAVNKYL  +  A + IV+  VR AA YVT++F+V
Sbjct:  273 MDIHSGGIDLKFPHHDNEMAQAEAQSGEKQWVNYFVHSGHLSIKERKMSKSLKNFITIRQALQNNTARQ-IRMLFLLHKYNAPMDYSDDTMAHATVLEKSFSNFFQNVKVALRSSTIQMSQKWTEHEQDLHNDIDTARYAVRKALLDDFDTATAMTALQDLVKAVNKYLETQGPA-KAIVSLVVRKAAVYVTEMFRV 467          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK68_9PHAE2.380e-11082.23Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835Z463_9STRA2.700e-7765.15Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S3XKM0_HETAK5.080e-7259.69Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1Y9A2_9STRA1.030e-6657.87Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A6U0T1A9_9STRA2.130e-6558.88Cysteine--tRNA ligase n=1 Tax=Eucampia antarctica ... [more]
A0A5D6YDM0_9STRA2.780e-6556.35Cysteine--tRNA ligase n=1 Tax=Pythium brassicum Ta... [more]
A0A7S3L6K9_9STRA9.810e-6559.09Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis... [more]
A0A812UK10_SYMMI2.690e-6455.61Cysteine--tRNA ligase n=1 Tax=Symbiodinium microad... [more]
A0A7S1XX51_9STRA4.060e-6455.33Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1FUV2_9STRA1.630e-6359.90Cysteine--tRNA ligase n=2 Tax=Corethron hystrix Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.120.640coord: 101..197
e-value: 2.0E-6
score: 30.1
NoneNo IPR availablePANTHERPTHR10890:SF3CYSTEINE--TRNA LIGASE, CYTOPLASMICcoord: 1..197
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 1..94
IPR032678tRNA synthetases class I, catalytic domainPFAMPF01406tRNA-synt_1ecoord: 1..93
e-value: 1.0E-35
score: 123.6
IPR015273Cysteinyl-tRNA synthetase, class Ia, DALRPFAMPF09190DALR_2coord: 142..178
e-value: 3.1E-5
score: 24.4
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 1..87
e-value: 4.3E-37
score: 129.7
IPR024909Cysteinyl-tRNA synthetase/mycothiol ligasePANTHERPTHR10890CYSTEINYL-TRNA SYNTHETASEcoord: 1..197
IPR009080Aminoacyl-tRNA synthetase, class Ia, anticodon-bindingSUPERFAMILY47323Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasescoord: 127..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9983contigD-dudresnayi_contig9983:566..9531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9983.28792.1mRNA_D-dudresnayi_contig9983.28792.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9983 566..9534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9983.28792.1 ID=prot_D-dudresnayi_contig9983.28792.1|Name=mRNA_D-dudresnayi_contig9983.28792.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=197bp
MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSK
SLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKI
FNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFD
TPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032678tRNA-synt_1_cat_dom
IPR015273Cys-tRNA-synt_Ia_DALR
IPR014729Rossmann-like_a/b/a_fold
IPR024909Cys-tRNA/MSH_ligase
IPR009080tRNAsynth_Ia_anticodon-bd