|
Homology
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A6H5JK68_9PHAE (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK68_9PHAE) HSP 1 Score: 339 bits (870), Expect = 2.480e-110 Identity = 162/198 (81.82%), Postives = 182/198 (91.92%), Query Frame = 1
Query: 1 SMDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 594
+MDIH+GG DLKFPHHDNE+AQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHS+ Q +RLLFLLHKYNTPMDYGDDAM+GAL AE+ F+EFFHNVKAALRR+T+++P R EPELTL + L ++K EV++CLCDDFDTPGA+ ALQELVK VNKY+ AKE+AGE IVADCVRGAAEYVTKIFKV
Sbjct: 272 TMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSSRQ-IRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELTLMSSLSDAKKEVKKCLCDDFDTPGAMGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKV 468
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A835Z463_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z463_9STRA) HSP 1 Score: 253 bits (645), Expect = 3.940e-77 Identity = 129/198 (65.15%), Postives = 150/198 (75.76%), Query Frame = 1
Query: 4 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVAL-QELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 594
MDIH+GG DL+FPHHDNEIAQAEA Y+C QWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQ H+A Q +R+ FLLHKYN PMDYGD+ MAGAL E+ F EFFH VK+ +R +T+ + +R+ E E+ L KL E K VR LCDDFDTP A+ L +LV+ VNKY+ K AG VR A EYVT+IFKV
Sbjct: 266 MDIHSGGVDLRFPHHDNEIAQAEAHYNCAQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQTHTARQ-IRMCFLLHKYNDPMDYGDNTMAGALAIERTFVEFFHAVKSVVRAATAVDELRLGEGEIALYRKLEECKSGVRAALCDDFDTPTAIKLLASDLVRTVNKYIQEKTDAGLKSHYIVVRTAGEYVTRIFKV 462
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A7S3XKM0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKM0_HETAK) HSP 1 Score: 228 bits (582), Expect = 7.470e-72 Identity = 117/196 (59.69%), Postives = 138/196 (70.41%), Query Frame = 1
Query: 4 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFK 591
MDIH+GG DLKFPHHDNE+AQ+EA C QWVNYF+HTGHLHIKGFKMSKSLKNFITI+QAL+ H+ Q +RL+FL+ KYN PMDYGD MAGAL E+ F E+FHNVKA LRR P + E+ L L E+K V LCDDFD P A+ LQ+LV+A N YL +V R AA+YVTKIF+
Sbjct: 23 MDIHSGGVDLKFPHHDNEMAQSEAHAGCRQWVNYFVHTGHLHIKGFKMSKSLKNFITIRQALETHTPRQ-IRLVFLMSKYNAPMDYGDSTMAGALSIERSFAEYFHNVKAVLRRDGVAGPQKWGAREVALGRALSEAKAGVHAALCDDFDCPSALKELQKLVRASNVYLEGNAAPATLLV----RAAAQYVTKIFR 213
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A7S1Y9A2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9A2_9STRA) HSP 1 Score: 221 bits (563), Expect = 1.510e-66 Identity = 114/197 (57.87%), Postives = 142/197 (72.08%), Query Frame = 1
Query: 4 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 594
MDIH+GG DLKFPHHDNE+AQAEA C QWVNYF+H GHLHIKGFKMSKSLKNFITI+QAL+++SA Q +RL FL+HKYN+PMDYGD+ M+ A+ AEK+F EFF N KAALR + K+ + LQ L +++ V L DDFDTP + AL +LVK+ N Y+ + ETI + + A YVT+IFKV
Sbjct: 126 MDIHSGGVDLKFPHHDNEMAQAEAHSGCTQWVNYFVHAGHLHIKGFKMSKSLKNFITIRQALEQNSARQ-IRLCFLMHKYNSPMDYGDNTMSHAMTAEKLFKEFFLNTKAALRATAMKDSKKWTPATKDLQKTLHQTQAAVDVALKDDFDTPAVMSALADLVKSTNSYM---QDNVETINSLLLNNVAAYVTRIFKV 318
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A6U0T1A9_9STRA (Cysteine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0T1A9_9STRA) HSP 1 Score: 221 bits (563), Expect = 3.100e-65 Identity = 116/197 (58.88%), Postives = 137/197 (69.54%), Query Frame = 1
Query: 4 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 594
MDIH+GG DLKFPHHDNE+AQAEA C QWVNYF+H GHLHIKGFKMSKSLKNFITI+ AL+ ++A Q +RL FLLHKYN PMDYGD+ M+ +L EK+F EFFHNVKA LR N R E LQ L + K V L DDFDTP ++ AL +LVKA N YL + T V +R AA Y+T IF++
Sbjct: 272 MDIHSGGVDLKFPHHDNEMAQAEAHSGCNQWVNYFVHAGHLHIKGFKMSKSLKNFITIRDALENNTARQ-IRLCFLLHKYNAPMDYGDNTMSHSLVTEKLFVEFFHNVKAVLREGNIINIQRWDESARQLQNTLSDIKSRVDAALRDDFDTPASINALSDLVKATNLYLDSCVARQITPVNLLLRNAAVYITHIFRI 467
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A5D6YDM0_9STRA (Cysteine--tRNA ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDM0_9STRA) HSP 1 Score: 221 bits (564), Expect = 4.040e-65 Identity = 111/197 (56.35%), Postives = 147/197 (74.62%), Query Frame = 1
Query: 4 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 594
+D+H+GG DL+FPHHDNEIAQAEA +D QWVNYFLHTGHLHI+G KMSKSLKNF+ I++AL+++S+ QL R LFLLHKYN PMDY D++M A+G ++ F+EFF NVKAALR + + E L A LLE+K+ V + L DD +TP A++ LQ+L K VN+Y+ + AGE +V+ +R AAEY+T I +V
Sbjct: 308 IDVHSGGIDLRFPHHDNEIAQAEAYFDFPQWVNYFLHTGHLHIEGLKMSKSLKNFVKIQEALRDNSSRQL-RFLFLLHKYNVPMDYNDNSMDEAVGVDRFFSEFFQNVKAALRALGADKTQKWTPREKKLSAALLEAKERVHQALADDLNTPAALLHLQQLAKEVNRYMAS---AGE-LVSMIIRSAAEYITHILRV 499
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A7S3L6K9_9STRA (Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6K9_9STRA) HSP 1 Score: 219 bits (559), Expect = 1.020e-64 Identity = 117/199 (58.79%), Postives = 143/199 (71.86%), Query Frame = 1
Query: 1 SMDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALR-RSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 594
+MDIH+GG DLKFPHHDNE+AQAEA+ QWVNYF+H GHLHI+G KMSKSLKNFITI+QAL+ +SA Q +R+LFLLHKYN PMDYGD+ ++ A+ AEK FNEFFHNVKAALR + + R +TLQ L + + +V L DDFDTP A+ L +LVKA N YL E +V VR A Y+TK+FKV
Sbjct: 265 TMDIHSGGVDLKFPHHDNEMAQAEAECGHPQWVNYFVHAGHLHIQGLKMSKSLKNFITIQQALEMNSARQ-IRMLFLLHKYNAPMDYGDNTLSRAVVAEKSFNEFFHNVKAALRSKDMMEQDQRWTPAAVTLQQTLTDVQAKVGAALRDDFDTPTAMTKLGDLVKATNVYL---ETETTQVVGLVVRSVASYITKMFKV 459
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A812UK10_SYMMI (Cysteine--tRNA ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UK10_SYMMI) HSP 1 Score: 218 bits (554), Expect = 3.920e-64 Identity = 109/196 (55.61%), Postives = 140/196 (71.43%), Query Frame = 1
Query: 4 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFK 591
+D+HAGG DLKFPHH+NEIAQ+E D QW+NY+LHTGHL+IKGFKMSKSLKNFITI+QAL+EHSA Q +R FLLHKYN PMDYGD M A+ EKIF+EFFHNVKA LRR P + + ++ L +K+ VR LCDDFDTP AV L++L++ VNKY+ ++G + + + A Y+T + +
Sbjct: 254 IDVHAGGVDLKFPHHENEIAQSEGCLDSHQWINYWLHTGHLNIKGFKMSKSLKNFITIRQALEEHSARQ-IRFCFLLHKYNAPMDYGDGTMTQAVNMEKIFSEFFHNVKATLRRVGVAGPQHVGQRDVALMQFQEATKENVRAALCDDFDTPTAVGHLKDLIREVNKYI----ESG-VVGSAVLSSTARYITSVLR 443
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A7S1XX51_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX51_9STRA) HSP 1 Score: 211 bits (538), Expect = 5.950e-64 Identity = 109/197 (55.33%), Postives = 133/197 (67.51%), Query Frame = 1
Query: 4 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 594
+DIH+GG DL FPHHDNE+AQ+EA Y C QWVNYF+H+GHLHIKGFKMSKSLKNFITI AL+E S+ QL R LFL H+YN PMDYGD M G L E+ F EFFHNVKA LR + P + E+ ++ LL K +V LCDDFDTP + L LV+ N Y E A V ++ +A Y+TK+F+V
Sbjct: 15 IDIHSGGVDLVFPHHDNEMAQSEAYYGCRQWVNYFVHSGHLHIKGFKMSKSLKNFITIGAALEEQSSRQL-RFLFLKHRYNQPMDYGDATMQGVLDMERTFVEFFHNVKATLRALPATGPQFWRQKEIAFESALLAIKQQVHDALCDDFDTPTVLQILLRLVRITNVYSKVFEPAPP--VPLIIKESARYITKMFRV 208
BLAST of mRNA_D-dudresnayi_contig9983.28792.1 vs. uniprot
Match: A0A7S1FUV2_9STRA (Cysteine--tRNA ligase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUV2_9STRA) HSP 1 Score: 216 bits (550), Expect = 2.370e-63 Identity = 118/197 (59.90%), Postives = 143/197 (72.59%), Query Frame = 1
Query: 4 MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKIFNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFDTPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV 594
MDIH+GG DLKFPHHDNE+AQAEA+ QWVNYF+H+GHL IK KMSKSLKNFITI+QALQ ++A Q +R+LFLLHKYN PMDY DD MA A EK F+ FF NVK ALR ST + + E E L + ++ VR+ L DDFDT A+ ALQ+LVKAVNKYL + A + IV+ VR AA YVT++F+V
Sbjct: 273 MDIHSGGIDLKFPHHDNEMAQAEAQSGEKQWVNYFVHSGHLSIKERKMSKSLKNFITIRQALQNNTARQ-IRMLFLLHKYNAPMDYSDDTMAHATVLEKSFSNFFQNVKVALRSSTIQMSQKWTEHEQDLHNDIDTARYAVRKALLDDFDTATAMTALQDLVKAVNKYLETQGPA-KAIVSLVVRKAAVYVTEMFRV 467
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 213.0 |
Seed ortholog evalue | 1.3e-52 |
Seed eggNOG ortholog | 65071.PYU1_T007036 |
KEGG rclass | RC00055,RC00523 |
KEGG ko | ko:K01883 |
KEGG Reaction | R03650 |
KEGG Pathway | ko00970,map00970 |
KEGG Module | M00359,M00360 |
GOs | GO:0000049,GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 |
EggNOG free text desc. | Cysteinyl-tRNA synthetase. Source PGD |
EggNOG OGs | 1MB85@121069,COG0215@1,KOG2007@2759 |
EC | 6.1.1.16 |
COG Functional cat. | J |
Best tax level | Pythiales |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 |
Hectar predicted targeting category | other localisation |
Exons | 6 |
Model size | 594 |
Cds size | 591 |
Stop | 0 |
Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622930961.8773694-UTR-D-dudresnayi_contig9983:9531..9534 | 1622930961.8773694-UTR-D-dudresnayi_contig9983:9531..9534 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig9983 9532..9534 - |
1690557981.3253422-UTR-D-dudresnayi_contig9983:9531..9534 | 1690557981.3253422-UTR-D-dudresnayi_contig9983:9531..9534 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig9983 9532..9534 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9983.28792.1 >prot_D-dudresnayi_contig9983.28792.1 ID=prot_D-dudresnayi_contig9983.28792.1|Name=mRNA_D-dudresnayi_contig9983.28792.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=197bp
MDIHAGGFDLKFPHHDNEIAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSK SLKNFITIKQALQEHSAAQLVRLLFLLHKYNTPMDYGDDAMAGALGAEKI FNEFFHNVKAALRRSTSKNPVRMLEPELTLQAKLLESKDEVRRCLCDDFD TPGAVVALQELVKAVNKYLGAKEKAGETIVADCVRGAAEYVTKIFKV back to topmRNA from alignment at D-dudresnayi_contig9983:566..9534- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-dudresnayi_contig9983.28792.1 ID=mRNA_D-dudresnayi_contig9983.28792.1|Name=mRNA_D-dudresnayi_contig9983.28792.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=8969bp|location=Sequence derived from alignment at D-dudresnayi_contig9983:566..9534- (Desmarestia dudresnayi DdudBR16 monoicous) TCCATGGATATTCATGCTGGCGGCTTCGATCTCAAGTTCCCCCACCACGA
CAATGAGATCGCTCAGGTAAAGGTGGCATGTAGCCCCAAGCCCCCTCGCT
GGAGACTACGTTTGTTTTGCTGGATTTTATCTCTGTGTTAATTTCTTGTG
TGCACTGAGAACTATTTGTGTCGGGAGGCGGCCGGCACGGTGGAATAGCT
ATCGATAGCGTATCCCAGCAAGACCCGTAATAGTCTGTCGCCCCCTCCGG
CGCCGCGATGGTAAGGTTACCGCATAGCAATCGTCCGAGATTGAACAACT
CGATGTATTGTCGTTTGCAACATATTGATGCTTGGGGAGGGGGCTGAGGG
TGATCGTGCGCTGTGTCTGAACGGTGAGACGGTAGCGTGGCTTTGCTGCC
CGCCCCCAATCAAGTGAAACGCATTTTTTTTGTTTTGTTGTGAAGCTAAA
GTAAAGATCAAACGCGTTGACATTGTGGTATAGGTGTTAAGCACGTGCTG
TGTATTCCATTGTCTTGAGCGATGCAGGGAAGGGTTTGGCTGGACGCGAC
GACGACTCGGAACATTAGCGTGTTGAAAGGGTGTCCTGCTAGCCTACGAT
GCGTGTTTTCGGTCGTGCGCTTTTTTTTTTGTTGCTTGGTTTGCGTGTGC
CGAGGAGGGAGGGGGGGGGGGGGGGGGGGGCGTACTTTTTTGCTGCTTGC
CTTGGTCATTTGACCATTGACCACGCATCCGTTTCGAGACGGAGCACCCT
TCCTATTCCTATTAGAGACACCTCCAACCTTTGAGCGCTCTTTAACTTTT
TGCCGTATCTTAGATAAAAACATTTTCTTGTGTTAATTCCCTTCGTGATT
CGCATTTTGTGGCCGTCACGTGTCTTCTGGATAGCGTTCGTTTTCTCGCT
TTTGTGTAGTTTACCAAACTTCTCCATGTGGCATTTTTTTCGCCTCATCT
CCTCCAACACATCCCGTTCCTGATTGTGTAGTCCACATTCTCCCACTGTG
TGGGTCCTGCTCTCTTCGGCCTTGCAACAAGGGCACATCCGTGTATCTTG
TTACTCCTGCTCCCGACTACCCGGGGGGGGGGGGGGGGGGGGGGGGGGCG
TGTGGGTCCCTCTGGAGGGGGGGACCTTTTCGGTTGGGTTTTGGGGGGGG
GATGCCGCGGGGGGGGGGGGGGCGNNNNNNNNNNTCCCTCGGGCGCGGCA
GCGGGGGCGTGTGGGGCTGCGTGCGCCCGCGGGTCGGCGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGTTGCGTCGTGTTGGTACCTACTGAGGTCGGGCT
CCTTTGTCGTGCGTATTGGTTACGGTATGCAACGGTGCAGGCGGAGGCGA
AGTACGATTGCTGTCAGTGGGTGAACTACTTTCTGCACACTGGCCATCTC
CACATCAAGGGCTTCAAGATGTCCAAGAGCCTCAAGAACTTCATCACCAT
CAAGCAGGCCCTCCAGGAACATTCGTCCCGCCAGGCAAGCGCGTTTTCTT
TTTTCTTTTTTCTTTTTTTTTTTTGCCATTTTTTTCATGGTCATGTGTTT
TCCTCGTCTCTTGTTCTTTGCGCCCCTTGTGTAGATAGCCGACGGGAAAG
CGCTGCGCAGTTGGTGACGACCAGCCACCCACAAGACGACGAGTTCGTGG
GCGTTAATTTTTGTCCGCCACTGGATTTTTTGTTGTTGTTACGTGTTAAA
TCAGTAGTAGCGATTGAGATCGTCTTACTACGCTGCTGTGTAGGCAGGAT
CTTTGAGATATTCGTTTGATTTTTCTGATAATGGTACCACGTGGGGGCTT
TTGATGAGCAGTTTGGAACAATGATATGACTCTGCCGCACCCTAAACCTA
ACGATCGCACTATAATAATAGGGAGTACAACCCTGCCTGAAGATCCGGAA
TAACCAGTTGTAAATATGTACTGAGTGTTAGTATACTATGATGGTGCCTT
TGACATCATCAAAGGCGTTGCTGTTTTGCTTGCCGTCTGTATATTCTTGC
GAGGAAACGGCTGTGTTCGGTTTCCCGATCGTGACCTGTGTAGGAGCTTG
GCCTCTTGGAGATGGCGAGTTGTCAATCGTCTCCGTGAGCACCCCCCCCC
CCCCCTTCCCCCCGCACAAACAGCGGCGAGAATGCGCGGCTAGATAAGAG
CACTATTTGGGGCGCAGGCAGGTACGCTTGCCCTGCCACAGGGCAGTGGT
CGTGCGGCGTAACGGTTTGTCGGTGTTCCTGGCCAGTCCATAGTTTTTTT
TTCCGTCGGATCTTGTCCGACTAGTGTAACAGGAAAAAACAATCAAAGCA
TGTTACGCGCATCCATGCCTTTAGTAATAATGCGTTTTCGTATGCATCGG
CTCATGCAACAATTAGGATTTTTTAGTACTGTAGAATCAAGAATCAATCA
ACTAGGCTCCCTGTTCACTTAGCGCACTGTCTTGATTTTTTTTCCACGTC
ATGAATCTTGCTCTTTGTCGTGTTTTTGGTATTATGGAGGACTCTATACT
GTTGCGGTGTTTTCAGTGTCCTGATGCGATATGGGAAAGTACAGAGTTTC
GGAGTCAATTTTTCTTTTCCTTCAGATTCCGTGAACACCAGCCTCAGATA
TGACCGATCCTGGGAACGATCATTTGATTGAATAGTTTCAGATTTTGGAA
ATGTAACGTCAGGTGATGACTCGATGTGATTGGTCAAAGTATTGCTGCAG
CTCAGCAGCAGCAGTGGCAGGTAGCAGATAGTATTGTAGTAGAGTAGGTA
AACTCGTAGGCAGGCAAAGCAGCAGCGACTTTCAACTTGCAAGCGACTCA
ACAACGACCATAGTCCAACCCTTACTCTGCCTCCACGATTCGTTTTTCTT
TGCCTTTGCCTTTGCTGCCTGCCCAATGCTAAGAGCAACCACCTATTTTT
GATCTTGCTTGATTGATGCTATTGCCACCATACGAGCAGCAGCCTCCTTC
ACTGAGAGACAGAGTCTGCTCCATCTAAATCCACCACACCCTGAGCGTTC
CAGTTGCGGCGATCCATGAAAGACATACAATCCGATGTGTCGTTGTCCTG
CCTTCTGTGAGCCTCATCACGAGAGGCGGCCAAGGCTTTATTCGCCGATG
GACCACAGCGCTGTAGTTCTCTGGCTTTGCCGACGGCAATCGCTGCTGTT
GCACCATGTTCTGTGCTTGTCCTCTGACTCTGCCAACTAGCCGTAGCCCT
TCTGCTTGTCGCCGCGTCCCCCGAAATACAGACTACGCTTGCTTCGAGTT
GTCCTTGTCCTGCCTTCTTTAAACCTCATCACGAGAAGATGCAGCCAAGG
CTTTCACGGATGGGACCACAGTACTGTAGTCCTCTGGCGCTGCCAAGTAG
CAATCGCTTCTGTGTGCACCACATTCTGTGCTTGTCGCGGCATTACCCAA
TGGAGAGACTCTTCTCTCTCCAAGGCAACGCCCTCTTAGGCGTGCATGCA
TGTCGCCGCGCTCCTGGAATGATTGACAATCCCTTGTCGCTTCCTTCCTT
CTGTGAGCCTCGTCACGAGAGGCAACCAAGGCTTTCCGCGACGGGATCGC
ATGCTCCATTGGTGTGTGTAGTGTGCGGTGTTTTTTATAGAGACGTGCGG
AGGAACAAGAGAAGAATCTGATACTGTGAGCAGCAGCAAACGCTCTCAGA
CTCGGGCCGTCATTTCGCTCTTTTGAACTGAGACCCTCGGGCATGCTCTC
AGTTTTTGCCCTTTTTTCGGGACCATTCCCAGGACCGGAGCCAGTAATCT
GAGAATTCAAGCAATCAGAGCGCAAAAATTGAATCCGAAACTCTCTACTG
CACGTTTTTATTGTTTCCTTTATGATAACGCCGGTGGCGTTTTTGCAGGT
CCGACTCTTGTTTCTGCTTCACAAGTACAACACGCCCATGGATTACGGGG
ACGACGCCATGGCGGGGGCGTTGGGCGCGGAGAAGATTTTCAACGAGTTC
TTCCACAATGTCAAGGCGGCTTTGCGGAGGTCCACGTCTAAGGTGATACG
AGGATTGGATTTTTTTTGCGGTGTGATGGCTCTGGGCGGCGGAGCTTTTT
GGCGGCGACGGCTGGTGCGTGTGTGCTCTCATCTTATTGCTGTTTGACGT
TCGTCGGGTGTGACTTTCACGCGTGTAGTGCGGCGTGGCGTAGTAGTATG
ATGCGTCGGATATGATTCGTTGGTAAATGACGAGATACGACTGTATAAAG
ATTTTTAACAGCCGGTTGTGTTTGCTAAGTCTGCAGCCGAGAGAGGACTC
GTTCTGTTTTTTTTGGTCTGGCGACGGGCCCGACATGTGCGCAACTAATC
AATCACATAATCAATCCATCGCCTTTTGTTGCAAGTTGTCTGCGTTGTGT
CATCCTGGAAAGCCTCTTCCGATATTGCTCCACGCATTTATTGACAGCGT
TCTTGACCCCCATCTTACAGCCTCGCCGCTGCAGGTTATCCATCTCACCA
CCAACGCCAAGCAGGAAACCATTATTTGCCGTACAAACCTTTATCTCGAA
CTCGAAGAGTACGGTCTAGCCTTCTTGATTTTTGGATTTTTGCGGCCGAG
TACACTATCCATTTGCTTTGCCGGTACGCGTACAAGATTGGGCATAGGGA
TCGGAGCTGGTAGCTTGAGGTCGTCGCTCTCCATATCAAAGACGGTGATC
AGCAGTAGAAAACAGCGATCGAGCTGATCACCGTCTTTGATATGGAGAGC
GACGACCTCAAGCCACCTGTTCCGATCCCTATGCCCAATCTTGTACATGA
ACCCGAAACGATGATAGTTGGTATATTCGGCCGCGGAAATCAGGCTTAGA
CAGTACTCTTCGAGTCGACGATACAGGGCCATGCGATACACCAACGTTTC
CTGCTTTGCGTTGTTGGTGACTCTGGGTAACTGGTGGTGCGGGTTGCAAC
CGGGAGCATCGTATTTTCCCTCAAGCATGACCCAAACAGACGATGTGGTA
GATTATGTTTTTCGCGGCCAACTGCACTAAGAGTTTTCTTTTCGGATACA
TACTCAAGCTTGGCAACAGGATAGGAGCTGGTGGCCTCGGTGAGGTCAAC
GGGCTCGATATCAAGAGAGCACCTCTGTGATTCCGAGGACGCTAATCTCA
CCGAAGCCGCCAGCTCCGAGCTTGTTGCCCAGATAGAAAGTGTTAGCCAA
ACGCAAAATGTTGGCTTTGATCCACGTCGAAGGTGATACGAGGTTTGGCT
TTTATGCGGTGTGGTGGCTCTCGGTAGCGGAGGTTTTTGGCGGGGATGAC
TGTTGCGTGTGTACTCTCGTCTCATCGCTGTTTGATCCCTGTCGAGTGTG
ATTTAACGTGTGTAGCGCGGTGTGGCATAGTAGTATGATGCGTCTGGTGG
AAGCCATTGATAAACGACGAGATGCGACTGTGCAAAGATGTTTAGCAGCC
AGGCGTGTGTTTCCCAAGTCTACAGACGAGAGCGCTCGTTCGGTGTTCTT
GTCCTACGACGGGTCCGATATGTGAGCAATCAATCAACCAATCGATCAAT
CCACCAACCCATCGATCAATCAATCTATCGCCTTTTTTTGCAACTTGTTT
GGCGTTGTTTCATCCTGGAAAGCCTCGTCCGATTTTGCTCCACGGTGCCG
TTAACAGCATTCTTGACCCACCCGCAATCCAGCCTTGCTGCTGCAGGTTA
TCCAGCTCACCACCAACGCCAAGCAGGAAACCTTTCTTGGTCTTATGAAC
CTGTAACGTCAACTCGAAGAGAGGTCTCGTCTTTGTTGATTTTTGCGGCC
GAGCACACCAACTATTTGCTTTTCGGATACGCGCACAAGATTGGGCACAG
GATCGAAGCTGGCGGCTTCGGCGAGATCCCCGTTCTCGAGTTCAAAGACG
GTGATCAGCTGCAGAAAACTGTCACCGAGCTTTTCACCGTCTTTCATCGC
GAGGACGTTGATCTCACCGAAGCCTCCATTTCCGATCCTGTTCCTAATCT
TCTACGGGTGTCCGAAACGCTCATGGTTGGTATATTCGGCCGTGCGAAAA
TAGGGAAGGCTCAAGACTGTACTCTTCGAGTCGACGATACAGGGTCATAC
GATCAACAAACGTTTCCTGCTTTGCGTTGGTGGGGAACTGGATAACTGGT
GGTGCAGGGTACAACTGGAGCGACGTGCTTTCCCTCATGCATGACCCAAA
CAGACGATGTGGTAGATTTTGGTTTTCGTTGCCAAGTGCTCCAAGAATTC
GCTTTTTGAATACACGTCCACGGTTGAGAAGAGGATCGGAGCTGGTGGCT
TAGGCGAGATCAGCGGGGTCGATATCAAGAGGGTATCTCTATGATCTTGA
GGACGCTTATCTTACCGAAGCCACCAGCTCCGAGCGTGTTCCCCAGATTG
AAAGTGTTTCCGAAACGCAACTTGTTGGCTTCGCAAAGGTCCACGTCTAT
GGTGACATGAGGGTTGGCTTTTATGCGGTGTGATGGCTCTCGATAACGGA
GCTTTTTGGCGCGGACGGCTGTTGCGTGCGTGCTCTGATTTCGTCGCTGT
TTGACGCGCGCCACGTGTGACTTCCACGTGTGTACGGCGGCGAAGCGTAG
TAGTATGAGGCATCGGGTGGTAGTCGTTGGTAAATGACGACATGCGACTG
TACAGATATTGTAGCAGGCAGTTGTGTGTTTGCCTAGTCTGTAGATGAGG
GTGCTCGTTCTGTTTTTTGTCCGGCGACGGGTCCGATTTGTGAGCAATGA
ACCAATCAATTAATCAAGCAAACGCCTTTTTTGCAACTTGTTTGGCGCTG
TTTCGTTTTTGCTCAACACTGCCGTTGGCAGCGTTCTTGACCCCCACTTA
TTCATCGATATACAGTAGCACTCAATTTCATAACTCTACGAGTGGAATAC
TCGTTGCTGTTGTTGTTTCTGTCATCCAGCCTCGCGGCTGCAGGTTATCC
AGCTCACCACCAACGCCAAACAGGAAACCTTTGTTAATCGTATGAACGTG
TATTTTCAACTCGAAGAGTACCGTCTAGCCTTTCTTGATTTGTGCAACCG
AGCACGCTATTCACGTGTTTGTCGGTTGAACATCGTTGGTGTGCTCGGCC
ACGAAAACCAGGAAGGCCAGGCGACTCTTTCGAAGTTGCCAATACAGGTT
CATACAATCAACAGAGGTTTCCTGCTTTGCGTTGGTGAGCGGGGATACTG
GTGGTGCAGGTTGTGAGTGCGAGCGATATATTTTCCTTCATGCATGACGC
AGCGGTGGCGCGATGGTCTATATGACTAAGTATTCGCTTCTGTTGGCGGA
AATTCGGGGTTCGATTCCCGGTGACACAATAGTGGCACTTTTCTGTGCCA
TCTTCCGTCGCGGAAAACGCGAGAGCGTGAGTAAGCACAATTCAATGAAA
GTCGTTGAGGGTAGAAAGTGCGCGCTCTTCTCGCGATAAAAATGTAGGCA
CGTACCGTATTGGGAAGGCGAGAGTAGCGCGTACTACGTGACCCCGGATC
TGAGTCACGAAGAGAGATGGAGCTAGATAAATAATAGGGCGAAGACAATA
AACGGGATGATAAAAGAAAAATAATGACGCAAAAAAGGAGTAGTGAAAAA
ATTATAAATATGAGCAATATTTGTGTTAACTATTTTTATTTATTTTCAGT
TTGGAGATAGGGAGGAACATATAATGTAAGCATACTTAATTAATTTTCAC
TTCCGAAGGAGAAGATATGGTAGATCGTGGGCGTGTGGAAATTGTCCAGG
TTGGAATCAACCATGCTTCGTCCATTGCTGGGATTGACGCTTTCTGTCAC
ACAGACGAGGAGCTCGATGAATCAAGGCAACGCCAAACCATGGACATCTA
AAAACGCGCCTTTGCGCCCCCTGCGTCCCTGGCCCGCTTCCCGATATTTC
TCCAGAACCCTGTCCGCATGCTCGAGCCGGAGCTGACTCTTCAGGCGAAA
CTGTTGGAGTCGAAGGACGAGGTTCGTCGCTGCCTGTGTGATGACTTTGA
CACGCCGGGTGCGGTTGTGGCCTTGCAGGAACTCGTCAAGGCCGTGAACA
AGGTTAGTTGCGCTGACTGCTGTGATGGAGTGGAACGAGGGAGTGGGGGA
TTATTCATGGGTGAAGTCCTTGTTTCCTGGGGAGTGTTTTTATTTGCCTT
GTTTATGTGCGTGTGCTGTGTTTGTGTGTGCGTGGTGCGACGTGGGCAGG
GTGTGCTTCAAGTGAACCGGTAATGGCACGGGGGGGTATGGGGAGGGTGG
GTATGACAAGTGGAATGTTTGAGTTTGACAAGGAAGGATAAAATATTGCT
CATATTTTGTTTTGGTTTGTTTTTTAGCTGGTGAGTTTGTTCCGCGGGAA
CACTTAGAAGGTATGACAGGAAATGGACGACAAAAAATGGCGCTCTACTT
GTGTTCCTCTGCAGGACTGTAATCGTTGCGTTGCCGTCAAGCGGCCAGCG
TCTTGGGCGGCCGCAGCTGCAACGACTGCTAAAAGCAATAACACTCATAT
GATTATTGTATGTAAGTGCGGGTTGTTTTGTCCTCCGGCGGATGGGTAGC
GGTAACGCTTGAGGTCATCGCACTTTCACTACAAGCTGTAGGTGTGCCCA
TTTAACTCTGATGTTGCAGGACACGACATTGCTGCCCCTTGTGTAGACAA
CAGCGCGTGAGTACGTCGACCCGCCCTGATGCGGTCCCACTAGAGTATCA
GGCGCGAGGGAAATACGCATAGCTTCCGGGGGAAGATAAGCTCCCCCGTG
TAGTGTAGGAATTTGCTTTCAGGGAACGTAGGGCTCCGGCGAGAAAGGCG
CGCGCCCAAGTGTAGGTTTGTGGTTTAAGAGGATGCGGGTGGGGGGTGCG
CTCGCGTTATTGTGTGCCTGCTTTGTGTTGACCCGATCGTCCTCTCTCCG
TCCTTGTCGGCTGTTTTGTGTGTGTGCAGTACCTGGGCGCGAAGGAAAAG
GCGGGCGAGACGATCGTCGCTGACTGCGTCCGTGGCGCGGCGGAATACGT
CACCAAGATCTTCAAGGTA back to topCoding sequence (CDS) from alignment at D-dudresnayi_contig9983:566..9534- >mRNA_D-dudresnayi_contig9983.28792.1 ID=mRNA_D-dudresnayi_contig9983.28792.1|Name=mRNA_D-dudresnayi_contig9983.28792.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1182bp|location=Sequence derived from alignment at D-dudresnayi_contig9983:566..9534- (Desmarestia dudresnayi DdudBR16 monoicous) ATGGATATTCATGCTGGCGGCTTCGATCTCAAGTTCCCCCACCACGACAA TGAGATCGCTCAGATGGATATTCATGCTGGCGGCTTCGATCTCAAGTTCC CCCACCACGACAATGAGATCGCTCAGGCGGAGGCGAAGTACGATTGCTGT CAGTGGGTGAACTACTTTCTGCACACTGGCCATCTCCACATCAAGGGCTT CAAGATGTCCAAGAGCCTCAAGAACTTCATCACCATCAAGCAGGCCCTCC AGGAACATTCGCGGAGGCGAAGTACGATTGCTGTCAGTGGGTGAACTACT TTCTGCACACTGGCCATCTCCACATCAAGGGCTTCAAGATGTCCAAGAGC CTCAAGAACTTCATCACCATCAAGCAGGCCCTCCAGGAACATTCCGCTGC GCAGTTGCGCTGCGCAGTTGGTCCGACTCTTGTTTCTGCTTCACAAGTAC AACACGCCCATGGATTACGGGGACGACGCCATGGCGGGGGCGTTGGGCGC GGAGAAGATTTTCAACGAGTTCTTCCACAATGTCAAGGCGGCTTTGCGGA GGTCCACGTCTAAGGTCCGACTCTTGTTTCTGCTTCACAAGTACAACACG CCCATGGATTACGGGGACGACGCCATGGCGGGGGCGTTGGGCGCGGAGAA GATTTTCAACGAGTTCTTCCACAATGTCAAGGCGGCTTTGCGGAGGTCCA CGTCTAAGAACCCTGTCCGCATGCTCGAGCCGGAGCTGACTCTTCAGGCG AAACTGTTGGAGTCGAAGGACGAGGTTCGTCGCTGCCTGTGTGATGACTT TGACACGCCGGGTGCGGTTGTGGCCTTGCAGGAACTCGTCAAGGCCGTGA ACAAGAACCCTGTCCGCATGCTCGAGCCGGAGCTGACTCTTCAGGCGAAA CTGTTGGAGTCGAAGGACGAGGTTCGTCGCTGCCTGTGTGATGACTTTGA CACGCCGGGTGCGGTTGTGGCCTTGCAGGAACTCGTCAAGGCCGTGAACA AGTACCTGGGCGCGAAGGAAAAGGCGGGCGAGACGATCGTCGCTGACTGC GTCCGTGGCGCGGCGGAATACGTCACCAAGATCTTCAAGGTATACCTGGG CGCGAAGGAAAAGGCGGGCGAGACGATCGTCGCTGACTGCGTCCGTGGCG CGGCGGAATACGTCACCAAGATCTTCAAGGTA back to top
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