prot_D-dudresnayi_contig9970.28777.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9970.28777.1
Unique Nameprot_D-dudresnayi_contig9970.28777.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length250
Homology
BLAST of mRNA_D-dudresnayi_contig9970.28777.1 vs. uniprot
Match: A0A6C0F3V1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F3V1_9ZZZZ)

HSP 1 Score: 123 bits (309), Expect = 9.540e-32
Identity = 64/133 (48.12%), Postives = 89/133 (66.92%), Query Frame = 0
Query:   42 WVMRFDGGSRGNPGLGGAGAVIYSCEDNKLNEVWCGYFFCGPTAVTNNVAEYEGLIQGLKQCAAMKIQNVLVQGDSELILRQVQRIYKVRQPHLQLLFQKVNKLLRKVPGTSFKHIYREENARADELSNNAMD 174
            + + FDG S+GNPG GGAGAVIY  ++    E+W G  F G   VTNN AEY GLI GLK    +KI+N+ V GDS+L+++Q+++IYKV+ P++  L+ + N   +      F H+YRE N RADELSN+ +D
Sbjct:   26 YTLNFDGCSKGNPGRGGAGAVIYKDQE----EIWAGATFVGAN-VTNNYAEYSGLILGLKTAIKLKIKNLDVLGDSDLVIKQMKKIYKVKSPNIYPLYLEANDTAKAFDKIEFTHVYRENNKRADELSNDGLD 153          
BLAST of mRNA_D-dudresnayi_contig9970.28777.1 vs. uniprot
Match: A0A6C0HQK6_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HQK6_9ZZZZ)

HSP 1 Score: 117 bits (294), Expect = 1.430e-29
Identity = 66/143 (46.15%), Postives = 93/143 (65.03%), Query Frame = 0
Query:   32 AATRNMESC-SWVMRFDGGSRGNPGLGGAGAVIYSCEDNKLNEVWCGYFFCGPTAVTNNVAEYEGLIQGLKQCAAMKIQNVLVQGDSELILRQVQRIYKVRQPHLQLLFQKVNKLLRKVPGTSFKHIYREENARADELSNNAM 173
            A T+N E+  ++V+ FDG  +GNPG GGAGAVIY    N   E+W    F G   +TNN+AEY GLI GLKQ A + I+N+ V GDS+L+++Q+  IYKV   +L  L++   +L +     S+ H+YR++N RADELSN  +
Sbjct:   13 AITKNQETQDNYVLFFDGCCKGNPGPGGAGAVIY----NNGIELWADCVFVGKK-ITNNIAEYTGLIIGLKQSAKLGIKNIAVNGDSQLVIKQMNGIYKVTSENLVELYKTAKQLEKSFDSISYNHVYRKDNKRADELSNQGL 150          
BLAST of mRNA_D-dudresnayi_contig9970.28777.1 vs. uniprot
Match: A0A7S2ULA3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULA3_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.760e-29
Identity = 73/170 (42.94%), Postives = 101/170 (59.41%), Query Frame = 0
Query:   11 GRTSLMTIRT--IKSAVPCTMVPAATRNMESCSWVMRFDGGSRGNPGLGGAGAVIYSCEDNKLNEVWCGYFFCGPTAVTNNVAEYEGLIQGLKQCAAMKIQNVLVQGDSELILRQVQRIYKVRQPHLQLLFQKVNKLLRKVPGTSFKHIYREENARADELSNNAMDTTSS 178
            GR S  + RT  + S   C        N    ++VMRFDGGSRGNPG+ G G V+Y  +     EVW G  +      TNN AEY+GL+ GL+   +M ++N++VQGDS+LI+ Q++  YKV+  +L  LF+ V  L R+       HIYR++N RADEL+N AMD  +S
Sbjct:   48 GRVSEESTRTNTVSSDSECDAAALIDPNR---TYVMRFDGGSRGNPGIAGCGMVLYDADTGM--EVWTGRQYL--ETATNNEAEYKGLLLGLQCARSMGVENIVVQGDSQLIVYQIEGKYKVKSKNLIPLFRAVMDLKRQFSFFEIGHIYRDKNGRADELANEAMDHKTS 210          
BLAST of mRNA_D-dudresnayi_contig9970.28777.1 vs. uniprot
Match: A0A7S1HED2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HED2_HEMAN)

HSP 1 Score: 116 bits (290), Expect = 8.390e-29
Identity = 67/156 (42.95%), Postives = 93/156 (59.62%), Query Frame = 0
Query:   27 CTMVPAATRNMESCSWVMRFDGGSRGNPGLGGAGAVIYSCEDNKLNEVWCGYFFCGPTAVTNNVAEYEGLIQGLKQCAAMKIQNVLVQGDSELILRQVQRIYKVRQPHLQLLFQKVNKLLRKVPGTSFKHIYREENARADELSNNAMDTTSSFSCY 182
            C  +    R++E     + FDGGSRGNPGL G+GAVIY     +  EVW G  F G    TNNVAEY GL+ GL     ++ ++++V+GDS+L++ QVQ I++V + HL        KLL K+     +H+ RE N RAD L+N AMDT  + + Y
Sbjct:   15 CAPLAGCGRDLE-----LYFDGGSRGNPGLAGSGAVIYLAGTTE--EVWTGSVFVG-ICETNNVAEYRGLLSGLSAAEKIRGKSLMVKGDSKLVINQVQNIWRVNKEHLLPHCNDAKKLLGKIANPKLEHVRREHNTRADALANAAMDTRRTRTAY 162          
BLAST of mRNA_D-dudresnayi_contig9970.28777.1 vs. uniprot
Match: A0A7Y3NUB8_9BACT (Ribonuclease HI family protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Y3NUB8_9BACT)

HSP 1 Score: 115 bits (288), Expect = 9.760e-29
Identity = 62/131 (47.33%), Postives = 87/131 (66.41%), Query Frame = 0
Query:   44 MRFDGGSRGNPGLGGAGAVIYSCEDNKLNEVWCGYFFCGPTAVTNNVAEYEGLIQGLKQCAAMKIQNVLVQGDSELILRQVQRIYKVRQPHLQLLFQKVNKLLRKVPGTSFKHIYREENARADELSNNAMD 174
            + FDGGSRGNPG  G G  I     N ++EV  G F       TNNVAEY  L++GL+      I++++++ DSEL++RQ+Q IY+V+ P L+LL  +  +LL K+P  SF H+YRE N+RAD+L+N AMD
Sbjct:    9 LNFDGGSRGNPGPAGIGFTIVDAHGNVVDEV--GEFI---GRCTNNVAEYTALVKGLEAAIERGIKHLIIRADSELVVRQIQGIYRVKHPDLKLLHARAVQLLAKIPTWSFGHVYREANSRADQLANMAMD 134          
BLAST of mRNA_D-dudresnayi_contig9970.28777.1 vs. uniprot
Match: A0A7S2KCF7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF7_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.220e-28
Identity = 65/134 (48.51%), Postives = 87/134 (64.93%), Query Frame = 0
Query:   41 SWVMRFDGGSRGNPGLGGAGAVIYSCEDNKLNEVWCGYFFCGPTAVTNNVAEYEGLIQGLKQCAAMKIQNVLVQGDSELILRQVQRIYKVRQPHLQLLFQKVNKLLRKVPGTSFKHIYREENARADELSNNAMD 174
            ++V++FDGGSRGNPG  GAG V+Y   D   +EVW G  + G  + TNN AEY GL+ GLK   A+ + N++VQGDSELI++Q+Q  YK +   L   F  V  L++       +HI RE+N RADEL+N AMD
Sbjct:   10 TYVLQFDGGSRGNPGTAGAGMVLY---DEVGHEVWHGRHYLGEHS-TNNEAEYTGLLAGLKCARAIGVSNIVVQGDSELIVKQLQGKYKCKSSKLIPYFTSVKSLIKGFNSFEVRHIPREQNFRADELANEAMD 139          
BLAST of mRNA_D-dudresnayi_contig9970.28777.1 vs. uniprot
Match: A0A2E4WTG6_9RICK (RNase H type-1 domain-containing protein (Fragment) n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E4WTG6_9RICK)

HSP 1 Score: 123 bits (308), Expect = 1.800e-28
Identity = 64/139 (46.04%), Postives = 94/139 (67.63%), Query Frame = 0
Query:   36 NMESCSWVMRFDGGSRGNPGLGGAGAVIYSCEDNKLNEVWCGYFFCGPTAVTNNVAEYEGLIQGLKQCAAMKIQNVLVQGDSELILRQVQRIYKVRQPHLQLLFQKVNKLLRKVPGTSFKHIYREENARADELSNNAMD 174
            N +   W ++FDGGSRGNPG+GGAGAV+Y  ++N+  E W   F+ G   +TNN AEY+GLI GLK  + + + N+LV+GDS L++ QV   ++V+   L++L  +V + + K+    F+HI R EN RAD+L+N AMD
Sbjct:    5 NTQVNQWKLQFDGGSRGNPGVGGAGAVLY--KNNQ--EQWSKTFYLGDN-ITNNQAEYKGLIGGLKHVSTLDLPNLLVEGDSNLVINQVSGTWRVKNDELKILHDEVQEYINKIKDIRFQHIPRNENKRADQLANEAMD 138          
BLAST of mRNA_D-dudresnayi_contig9970.28777.1 vs. uniprot
Match: A0A7S2I3Y3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I3Y3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.090e-27
Identity = 63/137 (45.99%), Postives = 89/137 (64.96%), Query Frame = 0
Query:   42 WVMRFDGGSRGNPGLGGAGAVIYSCEDNKLNEVWCGYFFCGPTAVTNNVAEYEGLIQGLKQCAAMKIQNVLVQGDSELILRQVQRIYKVRQPHLQLLFQKVNKLLRKVPGTSFKHIYREENARADELSNNAMDTTSS 178
            +V+RFDGGSRGNPG+ G+G V+Y  E+    EVW G  + G  + TNNVAEY GL+ G+K   A+  ++++ QGDS L++ Q+   +KV+   L+ +FQ+V KL  +       HI REEN+RAD L+N AMD   S
Sbjct:   72 FVLRFDGGSRGNPGVAGSGMVLYDAEEGA--EVWSGQKYLGEDS-TNNVAEYTGLLTGMKCAYALGARHIVAQGDSLLVVNQLNGEWKVKNQGLKPIFQEVMKLRGQFESFQINHIPREENSRADRLANKAMDDRKS 205          
BLAST of mRNA_D-dudresnayi_contig9970.28777.1 vs. uniprot
Match: A0A6C0CXM0_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CXM0_9ZZZZ)

HSP 1 Score: 113 bits (282), Expect = 2.350e-27
Identity = 67/145 (46.21%), Postives = 93/145 (64.14%), Query Frame = 0
Query:   36 NMESCSW------VMRFDGGSRGNPGLGGAGAVIYSCEDNKLNEVWCGYFFCGPTAVTNNVAEYEGLIQGLKQCAAMKIQNVLVQGDSELILRQVQRIYKVRQPHLQLLFQKVNKLLRKVPGTSFKHIYREENARADELSNNAMD 174
            N E C +      ++ FDG S+GNPGLGGAGAV+Y  +D +  EVW      G   VTNNVAEY GLI GL++    KI+N+LV+GDS+L+++Q++  YKV+   L   +Q+   L        F+H+YR++N RADELSN A+D
Sbjct:   49 NHEECKYEKETQYMLYFDGCSKGNPGLGGAGAVLY--KDGQ--EVWGSSQLVGDK-VTNNVAEYSGLIMGLQEVFVRKIKNILVRGDSQLVIKQMKGEYKVKSSSLVEYYQQAKLLESYFDKIVFEHVYRDKNKRADELSNMALD 188          
BLAST of mRNA_D-dudresnayi_contig9970.28777.1 vs. uniprot
Match: A0A388KPP4_CHABU (RNase H type-1 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KPP4_CHABU)

HSP 1 Score: 119 bits (299), Expect = 4.190e-27
Identity = 64/134 (47.76%), Postives = 92/134 (68.66%), Query Frame = 0
Query:   41 SWVMRFDGGSRGNPGLGGAGAVIYSCEDNKLNEVWCGYFFCGPTAVTNNVAEYEGLIQGLKQCAAMKIQNVLVQGDSELILRQVQRIYKVRQPHLQLLFQKVNKLLRKVPGTSFKHIYREENARADELSNNAMD 174
            ++++RFDGGSRGNPG+ G+GAV+YS E   L+E      + GP + TNNVAE+EGLI GL+   A ++ ++  +GDSELI++Q+  +Y+VR+PHL  L+QKV  +  +     F HI R +N  AD L+N AMD
Sbjct:    3 TYLVRFDGGSRGNPGVSGSGAVLYSPEGRVLSEA---SVYVGPQS-TNNVAEFEGLIVGLRMAIAHRVGSLRAEGDSELIIKQMNGVYRVRKPHLVPLYQKVRNMADRFDFIEFVHIERAKNHVADALANKAMD 132          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9970.28777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6C0F3V1_9ZZZZ9.540e-3248.12RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0HQK6_9ZZZZ1.430e-2946.15RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A7S2ULA3_9STRA2.760e-2942.94Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1HED2_HEMAN8.390e-2942.95Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7Y3NUB8_9BACT9.760e-2947.33Ribonuclease HI family protein n=1 Tax=Phycisphaer... [more]
A0A7S2KCF7_9STRA1.220e-2848.51Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A2E4WTG6_9RICK1.800e-2846.04RNase H type-1 domain-containing protein (Fragment... [more]
A0A7S2I3Y3_9STRA1.090e-2745.99Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6C0CXM0_9ZZZZ2.350e-2746.21RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A388KPP4_CHABU4.190e-2747.76RNase H type-1 domain-containing protein n=1 Tax=C... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 46..172
e-value: 3.2E-23
score: 81.9
IPR002156Ribonuclease H domainPROSITEPS50879RNASE_Hcoord: 38..174
score: 9.825
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 41..181
e-value: 1.3E-33
score: 117.9
NoneNo IPR availablePANTHERPTHR46387FAMILY NOT NAMEDcoord: 37..179
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..249
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 42..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9970contigD-dudresnayi_contig9970:2701..3450 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9970.28777.1mRNA_D-dudresnayi_contig9970.28777.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9970 2676..3496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9970.28777.1 ID=prot_D-dudresnayi_contig9970.28777.1|Name=mRNA_D-dudresnayi_contig9970.28777.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=250bp
MMSRYMLHGLGRTSLMTIRTIKSAVPCTMVPAATRNMESCSWVMRFDGGS
RGNPGLGGAGAVIYSCEDNKLNEVWCGYFFCGPTAVTNNVAEYEGLIQGL
KQCAAMKIQNVLVQGDSELILRQVQRIYKVRQPHLQLLFQKVNKLLRKVP
GTSFKHIYREENARADELSNNAMDTTSSFSCYHNFEECEALLKKHRSNFP
PLKDMKPKQKRVRKTAAALLKEEVIDTSNTIREEDVVVVDKEIKTGQPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002156RNaseH_domain
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf