prot_D-dudresnayi_contig9908.28728.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9908.28728.1
Unique Nameprot_D-dudresnayi_contig9908.28728.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length222
Homology
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BLAST of mRNA_D-dudresnayi_contig9908.28728.1 vs. uniprot
Match: D8LR92_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR92_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 4.770e-9
Identity = 56/152 (36.84%), Postives = 69/152 (45.39%), Query Frame = 0 
Query:   69 VDEDAAYLSACFETFGKLQISFVGLDNNLLTTLPEDVFDGLVELGDVFVRNNQLVSLPVGLFSSQNVFLDQLWLTGXXXXXXXXXXXDPLTGIFSLGLDSNPDLQCVPTNDAYEVYVDSDDILEGTCECEPAEAVTCDEGLSCQSGATGYTC 220
            +D D   +  C + FG+  ++ V L NN ++ +P   F GL  L                                XXXXXXXXXXX            SNPDLQCVP NDA  + VD  D   GTC C PAEAV C +G+ C  G  GY+C
Sbjct:    1 MDSDLDDVGRCIDVFGRGTMTRVYLSNNFISEMPVATFQGLSSL-QWLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSNPDLQCVPANDAITLEVD--DTTVGTCGCAPAEAVMCGDGVFCIPGELGYSC 149
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BLAST of mRNA_D-dudresnayi_contig9908.28728.1 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.150e-8
Identity = 28/52 (53.85%), Postives = 38/52 (73.08%), Query Frame = 0 
Query:  172 LQCVPTNDAYEV---YVDSDDILEGTCECEPAEAVTCDEGLSCQSGATGYTC 220
            LQC+P++ A  +   +   ++ILEGTCECEPAEA++C+ G SCQ G  GYTC
Sbjct:  511 LQCLPSSTATTIDLWFQPEEEILEGTCECEPAEAISCEAGTSCQPGTEGYTC 562
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BLAST of mRNA_D-dudresnayi_contig9908.28728.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 3.480e-6
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 0 
Query:  172 LQCVPTNDAYEV----YVDSDDILEGTCECEPAEAVTCDEGLSCQSGATGYTCE 221
            LQC+P++ A E+     ++ ++    TCECEPAEAV C+ G +CQ G  GYTCE
Sbjct:  516 LQCLPSSTATEISLWGQLEVEEAKAATCECEPAEAVYCETGTTCQPGVGGYTCE 569
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BLAST of mRNA_D-dudresnayi_contig9908.28728.1 vs. uniprot
Match: A0A6H5KAY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY3_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 3.350e-5
Identity = 28/74 (37.84%), Postives = 38/74 (51.35%), Query Frame = 0 
Query:   39 VLNSCLDPASADYKCIYAGSDTISFDGCGLVDEDAAYLSACFETFGKLQISFVGLDNNLLTTLPEDVFDGLVEL 112
             +N CLD   AD +C       +    CG+ D D   L++C E  G   I+++ L  N LTTLPE +F GL  L
Sbjct:  136 AVNVCLDTTDAD-RCEIDADGQLDLYSCGITDADFDDLASCLEDAGPEAITYLSLSQNELTTLPEGIFGGLTAL 208
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9908.28728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LR92_ECTSI4.770e-936.84Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
D7FL48_ECTSI1.150e-853.85Leucine rich repeat carbohydrate binding protein n... [more]
A0A6H5L1V3_9PHAE3.480e-648.15F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
A0A6H5KAY3_9PHAE3.350e-537.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 83..108
e-value: 48.0
score: 7.6
coord: 109..132
e-value: 4.5
score: 16.1
coord: 135..157
e-value: 7.4
score: 14.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 35..200
e-value: 3.3E-16
score: 61.1
NoneNo IPR availablePANTHERPTHR24366:SF102LEUCINE RICH REPEAT CONTAINING 15coord: 57..176
NoneNo IPR availablePANTHERPTHR24366FAMILY NOT NAMEDcoord: 57..176
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 89..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9908contigD-dudresnayi_contig9908:2070..8823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9908.28728.1mRNA_D-dudresnayi_contig9908.28728.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9908 1485..9742 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9908.28728.1 ID=prot_D-dudresnayi_contig9908.28728.1|Name=mRNA_D-dudresnayi_contig9908.28728.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=222bp
MCETFGAACSRSGGIEACDGQCEDDESDDDGDSSTTEVVLNSCLDPASAD
YKCIYAGSDTISFDGCGLVDEDAAYLSACFETFGKLQISFVGLDNNLLTT
LPEDVFDGLVELGDVFVRNNQLVSLPVGLFSSQNVFLDQLWLTGNQLTTL
PEGIFDPLTGIFSLGLDSNPDLQCVPTNDAYEVYVDSDDILEGTCECEPA
EAVTCDEGLSCQSGATGYTCE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf