prot_D-dudresnayi_contig9885.28695.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9885.28695.1
Unique Nameprot_D-dudresnayi_contig9885.28695.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length289
Homology
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BLAST of mRNA_D-dudresnayi_contig9885.28695.1 vs. uniprot
Match: D7FR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR26_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 3.200e-22
Identity = 63/109 (57.80%), Postives = 77/109 (70.64%), Query Frame = 0 
Query:  153 KPTADGTSDGTPLTALLGRGGGFRSRERARREAAFRLSSLGSQYPKFLDGGTVHRWLSEDYRSSSWTRDPLLDAKNRPQQQ-SGSGAYGGRTSSADKKGSGWVTSRSHG 260
            +P+    + G   T  LG  GG ++RERARREAAF+L+SLGSQYPKFLD  TV+RWLS+DY SSSW+RDP+L A NRPQ   S +G  GG      +KGSGWVT+ S G
Sbjct:  301 RPSGASANPGVSRTGRLGETGGEQARERARREAAFQLASLGSQYPKFLDDRTVNRWLSKDY-SSSWSRDPML-ALNRPQDTGSDNGRVGG---GGARKGSGWVTNGSRG 404
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9885.28695.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FR26_ECTSI3.200e-2257.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..64
e-value: 3.1E-7
score: 31.8
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 3..12
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 3..46
score: 8.919

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9885contigD-dudresnayi_contig9885:6670..10882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9885.28695.1mRNA_D-dudresnayi_contig9885.28695.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9885 6520..11159 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9885.28695.1 ID=prot_D-dudresnayi_contig9885.28695.1|Name=mRNA_D-dudresnayi_contig9885.28695.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=289bp
MRCGHSFCQSCLSRWYGDTVTDSAAHAHDYDSSGRSSSSRPCPICDEPTP
ALGDPRLAARRNNKKNRRQRWRPRGNPGPLRFRWPGAASRAATAPTSGFP
SGAGNSASASGADLRFVSPRLGPKPALTCARQGSVPAPLPPPPPPPRPLA
PLKPTADGTSDGTPLTALLGRGGGFRSRERARREAAFRLSSLGSQYPKFL
DGGTVHRWLSEDYRSSSWTRDPLLDAKNRPQQQSGSGAYGGRTSSADKKG
SGWVTSRSHGRISDSGGGLGERRSYGGGCSSSATGGGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR001841Znf_RING