prot_D-dudresnayi_contig9844.28657.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9844.28657.1
Unique Nameprot_D-dudresnayi_contig9844.28657.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length273
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig9844.28657.1 vs. uniprot
Match: D8LKX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX3_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 1.090e-78
Identity = 143/217 (65.90%), Postives = 166/217 (76.50%), Query Frame = 0 
Query:   52 HLSRIELEGEGKLLGSMALCLGMVMAVGAAMGAAGVAFSQDDVGRLPLLGAVYLSAPLSLADFVTAMTFVVKRSEVLRLDRQHEENRGRRPXXXXXXXXXXXXSSQSAADSFRRLYDVFLFMALALSVLEALMLRLGRRRLADAAAR-RKERG-SRSLLSTDALESLLDEEDVRRAGYEGWPGESVQQQNLVMEQRYEQLRRANMEKNEGLLEHTRG 266
            HL+RI LEGEGKLLGS+AL LG +MA+GA  GAAG  FS D+ GRLPLLGAVYLSAPLSLAD +  +TF+VKRSEVLRLD +HE++RG RP              +S ADSFRRLYD FL MALA SVLEALM RLG RR+A  A R R+ +G   SL+    +ESLLDEEDVRR G+E W G++VQQ  L+MEQRYEQLRR+N+EKNEGLLEHTRG
Sbjct:    2 HLNRIGLEGEGKLLGSIALVLGSMMAIGALCGAAGTMFSADEGGRLPLLGAVYLSAPLSLADLIAGVTFIVKRSEVLRLDLEHEQSRGGRPHPGPPSPVPGGDDPESQADSFRRLYDAFLCMALAFSVLEALMFRLGSRRIAANAERHRRAQGFGESLVYGSGMESLLDEEDVRRNGWEDWRGDTVQQ-GLMMEQRYEQLRRSNLEKNEGLLEHTRG 217
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9844.28657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKX3_ECTSI1.090e-7865.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..185
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 186..272
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..122
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..32
NoneNo IPR availableTMHMMTMhelixcoord: 65..87
NoneNo IPR availableTMHMMTMhelixcoord: 166..188
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 28..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9844contigD-dudresnayi_contig9844:1365..3867 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9844.28657.1mRNA_D-dudresnayi_contig9844.28657.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9844 601..3867 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9844.28657.1 ID=prot_D-dudresnayi_contig9844.28657.1|Name=mRNA_D-dudresnayi_contig9844.28657.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=273bp
MRPSTTSTRWARRVRLDSNSRAGPSPTFIPLTIFRGLVGLAFICFGEFFW
THLSRIELEGEGKLLGSMALCLGMVMAVGAAMGAAGVAFSQDDVGRLPLL
GAVYLSAPLSLADFVTAMTFVVKRSEVLRLDRQHEENRGRRPKPGPEPSP
DPDESSQSAADSFRRLYDVFLFMALALSVLEALMLRLGRRRLADAAARRK
ERGSRSLLSTDALESLLDEEDVRRAGYEGWPGESVQQQNLVMEQRYEQLR
RANMEKNEGLLEHTRGGNQNTL*
back to top