prot_D-dudresnayi_contig9824.28634.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dudresnayi_contig9824.28634.1
Unique Name	prot_D-dudresnayi_contig9824.28634.1
Type	polypeptide
Organism	Desmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length	299

Homology

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BLAST of mRNA_D-dudresnayi_contig9824.28634.1 vs. uniprot
Match: A0A7S2V6E6_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6E6_9STRA)

HSP 1 Score: 203 bits (517), Expect = 6.090e-58
Identity = 97/150 (64.67%), Postives = 123/150 (82.00%), Query Frame = 0

Query:  151 DKTVRELFVGNTPQGTSDFVLMEFLNAAMKQVNLNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRLTGQE--DADNVVDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMQKVKLLL 298
            DK  RELFVGNTP GTS+ VLMEFLNAA+ QV L T+PGNP++ CRV+NK+AF+ELRS+EE    L+LNGIPFMGQ+LKIGRP+KY GP+  ASTWQ LTGQ+  +  +VVDP+TK+YRELYIG+T+ +MT++ L++FL   MQ+V L L
Sbjct:  203 DKAFRELFVGNTPPGTSELVLMEFLNAALNQVKLTTAPGNPIIGCRVSNKFAFIELRSAEETNNCLSLNGIPFMGQLLKIGRPTKYCGPVIQASTWQALTGQQAPEGASVVDPSTKLYRELYIGSTTAEMTELGLQEFLGTAMQQVGLTL 352

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BLAST of mRNA_D-dudresnayi_contig9824.28634.1 vs. uniprot
Match: A0A7S3XTW3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTW3_HETAK)

HSP 1 Score: 195 bits (496), Expect = 5.640e-56
Identity = 93/150 (62.00%), Postives = 116/150 (77.33%), Query Frame = 0

Query:  151 DKTVRELFVGNTPQGTSDFVLMEFLNAAMKQVNLNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRLTGQEDADN----VVDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMQKVKL 296
            DKT RELFVGNTP GTS+ VLMEFLNAAM QV  N   GNP+++CR++ K+AF+ELR++EE    LNLNGIPFMG  LK+GRP+KY GPITPA TWQ+LTGQ    +     VDP TK+YR+LY+GN SP+MT+  LK+FL + M++V L
Sbjct:   53 DKTKRELFVGNTPPGTSEVVLMEFLNAAMIQVKQNIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQLTGQAPPADPTAVAVDPQTKIYRDLYVGNCSPEMTEPALKEFLGSAMEQVGL 202

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BLAST of mRNA_D-dudresnayi_contig9824.28634.1 vs. uniprot
Match: A0A7S4D6X1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6X1_HETAK)

HSP 1 Score: 195 bits (496), Expect = 5.640e-56
Identity = 93/150 (62.00%), Postives = 116/150 (77.33%), Query Frame = 0

Query:  151 DKTVRELFVGNTPQGTSDFVLMEFLNAAMKQVNLNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRLTGQEDADN----VVDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMQKVKL 296
            DKT RELFVGNTP GTS+ VLMEFLNAAM QV  N   GNP+++CR++ K+AF+ELR++EE    LNLNGIPFMG  LK+GRP+KY GPITPA TWQ+LTGQ    +     VDP TK+YR+LY+GN SP+MT+  LK+FL + M++V L
Sbjct:   53 DKTKRELFVGNTPPGTSEVVLMEFLNAAMIQVKQNIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQLTGQAPPADPTAVAVDPQTKIYRDLYVGNCSPEMTEPALKEFLGSAMEQVGL 202

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BLAST of mRNA_D-dudresnayi_contig9824.28634.1 vs. uniprot
Match: A0A7S4D6W7_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6W7_HETAK)

HSP 1 Score: 195 bits (496), Expect = 1.070e-54
Identity = 93/150 (62.00%), Postives = 116/150 (77.33%), Query Frame = 0

Query:  151 DKTVRELFVGNTPQGTSDFVLMEFLNAAMKQVNLNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRLTGQEDADN----VVDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMQKVKL 296
            DKT RELFVGNTP GTS+ VLMEFLNAAM QV  N   GNP+++CR++ K+AF+ELR++EE    LNLNGIPFMG  LK+GRP+KY GPITPA TWQ+LTGQ    +     VDP TK+YR+LY+GN SP+MT+  LK+FL + M++V L
Sbjct:   53 DKTKRELFVGNTPPGTSEVVLMEFLNAAMIQVKQNIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQLTGQAPPADPTAVAVDPQTKIYRDLYVGNCSPEMTEPALKEFLGSAMEQVGL 202

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BLAST of mRNA_D-dudresnayi_contig9824.28634.1 vs. uniprot
Match: A0A835ZHK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHK3_9STRA)

HSP 1 Score: 188 bits (477), Expect = 2.950e-52
Identity = 94/158 (59.49%), Postives = 114/158 (72.15%), Query Frame = 0

Query:  151 DKTVRELFVGNTPQGTSDFVLMEFLNAAMKQVNLNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRLTGQED------------ADNVVDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMQKVKL 296
            DKT  ELFVGNTP  TS+FVL+ FLNAAM QVNLNT+PGNP+V CRV+NK+AF+ELRS +E    L+LN IPFMG  LKIGRPSKY+GP    +TWQ LTGQ +            + + +DPATKVYRELY+GN  P MT+  + +FL  T+QKV L
Sbjct:   44 DKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGL 201

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BLAST of mRNA_D-dudresnayi_contig9824.28634.1 vs. uniprot
Match: A0A7R9UCU5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCU5_9STRA)

HSP 1 Score: 174 bits (442), Expect = 3.110e-48
Identity = 83/146 (56.85%), Postives = 109/146 (74.66%), Query Frame = 0

Query:  151 DKTVRELFVGNTPQGTSDFVLMEFLNAAMKQVNLNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRLTGQEDADNVVDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMQKVKL 296
            +K  RELFVGN P GT++  L +FL  AM++ NL    GNP+V+ R+N+++AFVE RS EE T ALNLNG+PFMG +LKIGRPSKY GP + A TWQ LTG+     VVDP+TK+YREL++GNT+P++T  +L DFL+  + KV L
Sbjct:   47 NKLNRELFVGNIPPGTAELTLKDFLYEAMQKTNLLHHAGNPIVSTRINSRFAFVEFRSVEEATSALNLNGVPFMGTLLKIGRPSKYVGPASQAVTWQELTGERPDPQVVDPSTKLYRELFVGNTAPEVTAPLLMDFLNAALVKVGL 192

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BLAST of mRNA_D-dudresnayi_contig9824.28634.1 vs. uniprot
Match: D7FHG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG0_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 5.910e-47
Identity = 109/152 (71.71%), Postives = 119/152 (78.29%), Query Frame = 0

Query:   41 EEKQAAPKP-TSMGIAPSSTTAASAVPGQ---AMLNPAQIALAAARNLGVHSALPAQAAAHALSGMG--GGAGYQANPQLLAQLMRPSQPN---PGQFSLPLGT--GAVPGMLGGMGMGMGDKTVRELFVGNTPQGTSDFVLMEFLNAAMKQ 181
            +++ AAPK  T  G+APSSTTA +        A LNPAQIALAAARNLGV SALP QAA   LSG+G  G  G+QANPQLLAQ+MR +Q     PGQFSLPLG   GAVPGMLGGMGMGMGDKTVRELFVGNTPQGTSDFVL+EFLNAAMKQ
Sbjct:   98 QDRSAAPKSVTDGGLAPSSTTAPAXXXXXXPAAGLNPAQIALAAARNLGVPSALPGQAAG-GLSGLGAAGAGGFQANPQLLAQVMRSAQQQAGTPGQFSLPLGAAAGAVPGMLGGMGMGMGDKTVRELFVGNTPQGTSDFVLLEFLNAAMKQ 248

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BLAST of mRNA_D-dudresnayi_contig9824.28634.1 vs. uniprot
Match: A0A7S1UKM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKM1_9STRA)

HSP 1 Score: 169 bits (429), Expect = 3.420e-46
Identity = 82/142 (57.75%), Postives = 102/142 (71.83%), Query Frame = 0

Query:  155 RELFVGNTPQGTSDFVLMEFLNAAMKQVNLNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRLTGQEDADNVVDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMQKVKL 296
            RELF GN P GT++ VL EF++ AMK+ NL    GNPV + R+N+++AFVE R+ EECT ALNLN IPFMG  LKIGRP+KY GP + A TWQ LTGQ      VDP+TK+YREL+IGNT+  +T  +L DFL   + KV L
Sbjct:   48 RELFFGNIPAGTTELVLKEFIHTAMKRTNLLHEEGNPVASTRINSRFAFVEFRTVEECTSALNLNAIPFMGMTLKIGRPAKYAGPPSTALTWQELTGQPKQAEAVDPSTKLYRELFIGNTAEGITAPLLIDFLDGALMKVGL 189

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BLAST of mRNA_D-dudresnayi_contig9824.28634.1 vs. uniprot
Match: A0A6H5L257_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L257_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 4.860e-46
Identity = 104/137 (75.91%), Postives = 110/137 (80.29%), Query Frame = 0

Query:   55 APSSTTAASAVPGQ---AMLNPAQIALAAARNLGVHSALPAQAAAHALSGMG--GGAGYQANPQLLAQLMRPSQPN---PGQFSLPLGTGA--VPGMLGGMGMGMGDKTVRELFVGNTPQGTSDFVLMEFLNAAMKQ 181
            APSSTTA +A       A LNPAQIALAAARNLGV SALP QAA   LSG+G  G  G+QANPQLLAQ+MR +Q     PGQFSLPLG GA  VPGMLGGMGMGMGDKTVRELFVGNTPQGTSDFVL+EFLNAAMKQ
Sbjct:   12 APSSTTAPAAXXXXXPAAGLNPAQIALAAARNLGVPSALPGQAAG-GLSGLGAAGAGGFQANPQLLAQVMRSAQQQAGTPGQFSLPLGAGAGAVPGMLGGMGMGMGDKTVRELFVGNTPQGTSDFVLLEFLNAAMKQ 147

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BLAST of mRNA_D-dudresnayi_contig9824.28634.1 vs. uniprot
Match: A0A7S0G8A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G8A8_9STRA)

HSP 1 Score: 169 bits (427), Expect = 5.170e-46
Identity = 91/172 (52.91%), Postives = 113/172 (65.70%), Query Frame = 0

Query:  136 GAVPGMLGGMGMGMG-----DKTVRELFVGNTPQGTSDFVLMEFLNAAMKQVNLNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRLTGQEDADNVVDPAT------KVYRELYIGNTSPDMTDMVLKDFLSNTMQKVKL 296
            G VPGM+  M M        DK +RELFVGNTPQGTS+ +L EFLN AM++ NL      PV+ CRV+ K+AF+EL S +    ALNLNGIPFMG  LK+ RPSKY GP   AS+WQ LTGQ    N+   +       KV REL+IGNT+P+MT+ +LKDFL   M++V L
Sbjct:   83 GGVPGMMMNMMMATPMTNPQDKVMRELFVGNTPQGTSEILLREFLNGAMRRTNLCGPTDTPVIQCRVSAKFAFIELSSVDVTNIALNLNGIPFMGMSLKVSRPSKYSGPHVAASSWQELTGQPLPSNIAPISDSKAAEDKVNRELFIGNTTPEMTEQMLKDFLGKAMEQVGL 254

The following BLAST results are available for this feature:

BLAST of mRNA_D-dudresnayi_contig9824.28634.1 vs. uniprot

BLAST of mRNA_D-dudresnayi_contig9824.28634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S2V6E6_9STRA	6.090e-58	64.67	Hypothetical protein n=2 Tax=Fibrocapsa japonica T...	[more]
A0A7S3XTW3_HETAK	5.640e-56	62.00	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S4D6X1_HETAK	5.640e-56	62.00	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]
A0A7S4D6W7_HETAK	1.070e-54	62.00	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]
A0A835ZHK3_9STRA	2.950e-52	59.49	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7R9UCU5_9STRA	3.110e-48	56.85	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
D7FHG0_ECTSI	5.910e-47	71.71	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S1UKM1_9STRA	3.420e-46	57.75	Hypothetical protein (Fragment) n=1 Tax=Phaeomonas...	[more]
A0A6H5L257_9PHAE	4.860e-46	75.91	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S0G8A8_9STRA	5.170e-46	52.91	Hypothetical protein (Fragment) n=1 Tax=Proboscia ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 156..231 e-value: 1.5E-5 score: 34.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 155..235 score: 10.514
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 152..259 e-value: 2.6E-21 score: 77.8
None	No IPR available	PANTHER	PTHR23139	RNA-BINDING PROTEIN	coord: 2..265
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 154..289

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dudresnayi_contig9824	contig	D-dudresnayi_contig9824:500..9517 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dudresnayi_contig9824.28634.1	mRNA_D-dudresnayi_contig9824.28634.1	Desmarestia dudresnayi DdudBR16 monoicous	mRNA	D-dudresnayi_contig9824 500..9517 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dudresnayi_contig9824.28634.1 ID=prot_D-dudresnayi_contig9824.28634.1|Name=mRNA_D-dudresnayi_contig9824.28634.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=299bp
RSSRKHRRRSRSSERHHRRSRRDDRGSRRSRSRSDSESYGEEKQAAPKPT
SMGIAPSSTTAASAVPGQAMLNPAQIALAAARNLGVHSALPAQAAAHALS
GMGGGAGYQANPQLLAQLMRPSQPNPGQFSLPLGTGAVPGMLGGMGMGMG
DKTVRELFVGNTPQGTSDFVLMEFLNAAMKQVNLNTSPGNPVVTCRVNNK
YAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRLT
GQEDADNVVDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMQKVKLLL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf