prot_D-dudresnayi_contig975.28542.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig975.28542.1
Unique Nameprot_D-dudresnayi_contig975.28542.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length79
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Match: A0A6H5KKD9_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKD9_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.170e-27
Identity = 56/79 (70.89%), Postives = 63/79 (79.75%), Query Frame = 0 
Query:    1 MGRGFEALVANEFSPYGAIFRLSTKIGTVT-AYTNPMTGDEVLRCFGFDGGRYFVDLAILAGVGVCGLVLAFVLLKRSR 78
            +GRGFE+LVANEFSPYGA+FRLSTKIG+    YT+PMTGD++LRCFGF  GR   DL ILA VG  GL LA V LKRSR
Sbjct: 1991 IGRGFESLVANEFSPYGAVFRLSTKIGSAPIVYTDPMTGDQILRCFGFSSGRTLTDLGILAAVGGGGLALALVFLKRSR 2069
[Close]
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Match: A0A6H5L0D0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D0_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 2.350e-21
Identity = 42/77 (54.55%), Postives = 57/77 (74.03%), Query Frame = 0 
Query:    1 MGRGFEALVANEFSPYGAIFRLSTKIGTVTAYTNPMTGDEVLRCFGFDGGRYFVDLAILAGVGVCGLVLAFVLLKRS 77
            +  GFEAL+ NEFS YGA+F L+T I  VTA   P+TGD +L CFGF+ GR+ +D+ +LA +G  GL+LA+ LLKR+
Sbjct:  257 IAHGFEALLINEFSEYGALFTLTTVISGVTASVGPLTGDSILSCFGFENGRFSMDMGLLAAIGGAGLLLAYALLKRA 333
[Close]
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Match: D8LNV5_ECTSI (ATP-binding cassette superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV5_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 1.850e-13
Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 0 
Query:   16 YGAIFRLSTKIGTVTAYTNPMTGDEVLRCFGFDGGRYFVDLAILAGVGVCGLVLAFVLLKRS 77
            YGA+F L+T I  VTA   P++GD +L CFGF+ GR+ +D+ +L  +G  GL+LA+ LLKR+
Sbjct: 1921 YGALFTLTTVISGVTASVGPLSGDNILSCFGFENGRFSLDMGLLVAIGGAGLLLAYALLKRA 1982
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KKD9_9PHAE1.170e-2770.89ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A6H5L0D0_9PHAE2.350e-2154.55ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LNV5_ECTSI1.850e-1350.00ATP-binding cassette superfamily n=1 Tax=Ectocarpu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..78
NoneNo IPR availableTMHMMTMhelixcoord: 52..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig975contigD-dudresnayi_contig975:28448..29370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig975.28542.1mRNA_D-dudresnayi_contig975.28542.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig975 28379..29568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig975.28542.1 ID=prot_D-dudresnayi_contig975.28542.1|Name=mRNA_D-dudresnayi_contig975.28542.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=79bp
MGRGFEALVANEFSPYGAIFRLSTKIGTVTAYTNPMTGDEVLRCFGFDGG
RYFVDLAILAGVGVCGLVLAFVLLKRSR*
back to top