prot_D-dudresnayi_contig9671.28460.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9671.28460.1
Unique Nameprot_D-dudresnayi_contig9671.28460.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length221
Homology
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: A0A482S7X5_9ARCH (RNase_PH domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7X5_9ARCH)

HSP 1 Score: 99.8 bits (247), Expect = 4.500e-22
Identity = 59/210 (28.10%), Postives = 114/210 (54.29%), Query Frame = 0
Query:    1 MIFQVGTFSSIGVSGSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGYFECEVTYSKHITALGSHQCDNDDITRLRRI-SQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRNLM 209
            +I   G   + G+ GS++ E+ GS +AC   + R   K  S     + G  EC+V+++ H+   G    D D+I +++++    V DA  P + L+ YPK ++ ++ VVL+SS +DLC  +N  SLAL DALV++RD+  A+ I   +        S +++ ++  + +  + ++   ++++ +GR S   +   ID    +C ++R ++
Sbjct:   27 LIMTRGWSKTEGIIGSAFAEIAGSKVACYVFAPRAAAKVNS---GFETGLVECDVSFASHLNMGGM---DEDEIDKMKKLLGSKVVDAFTPVIMLENYPKSVIYITAVVLQSSGYDLCCMLNCTSLALCDALVDLRDILSAYTIQ-TSIASQSASQSVFQSYQNQALLIASMSSIQEVTVLEVQGRFSGGDLVQAIDQAKVQCSKVREII 229          
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: F0WFV6_9STRA (Exosome complex exonuclease MTR3like protein putativ n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WFV6_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.060e-15
Identity = 63/207 (30.43%), Postives = 103/207 (49.76%), Query Frame = 0
Query:    7 TFSSIGV----SGSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGYFECEVTYSKHITALGSHQC--DNDDITRLRRISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRN 207
            T+  +GV    SGS+YVE+ G+ + C     RN  + R   ++   G   C+V ++       +     D D+I     +SQ+V  A+ P+++LDK PK ++S  +V+L+S   +L   I  ASLALADA +EMRDL  A     ++ +   +  +  E +      L  LP+L  S+ V  +G  ++  V+  ID     C  + N
Sbjct:   36 TYMQVGVIHNASGSAYVELQGTKVICAVYGPRNNPRGRRKFHE--GGQLICDVKFAPFAERNRTRNAGQDPDEID----LSQIVTKALLPAIFLDKLPKCVVSCFVVILQSDGSELATAIMCASLALADAAIEMRDLVTACNAGIVDDKLLVDLCTSEERMSQGNTMLAFLPSLQKSTFVMQQGTMTHAQVEEMIDVCSIACSSVLN 236          
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: A0A2E7LTA3_9ARCH (Exosome complex exonuclease Rrp41 n=2 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A2E7LTA3_9ARCH)

HSP 1 Score: 78.2 bits (191), Expect = 6.190e-14
Identity = 46/151 (30.46%), Postives = 80/151 (52.98%), Query Frame = 0
Query:   66 SHQCDNDDITRLRRISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRNLMSTNLLKR 216
            S +C      R + IS+++ ++++ SL L KYP ++  + +V+L +++    A INAASLA ADA +EMRDL C+ A          +     +N     + + +LPNLG  SL+Q +G  S +  D   D ++    ++  +    L++R
Sbjct:   85 SDRCRPGPSRRSKEISKVISESLEASLLLHKYPARMFEIDVVILNANAGTRTAAINAASLACADAGIEMRDLVCSVAAGKAEDTVLLDLFQPEDNYGQADLPMAVLPNLGEISLIQMDGDLSLKEFDEGFDMILESAKELYEIQKKALMER 235          
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: D0NP71_PHYIT (Exosome complex exonuclease MTR3-like protein n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NP71_PHYIT)

HSP 1 Score: 78.2 bits (191), Expect = 7.670e-14
Identity = 62/216 (28.70%), Postives = 108/216 (50.00%), Query Frame = 0
Query:    4 QVGTFSSIGVSGSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGYFECEVTYSKHITALGSHQCDNDDITRLRRISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSN----EIVDACIDSLVGKCDQIRNLMSTNLLK 215
            Q+G  S  G +GS+YVE+  + + C     R   + R   ++  +G   C+V Y+     L   +   D       +S +V++A+ P++ L K PK ++S+ + +L+     L A +N ASLALADA VEM D+  A +   +N     +     E   D K+ L  +P++G  + +   G+  +    E VD C D+  G    IR+L++ +L++
Sbjct:   43 QLGAVS--GAAGSAYVELGRTRVLCAVYGPRTDTRARREFSK--DGQLVCDVKYAPFADKLTRRERGQDPDEM--ELSAIVEEALAPAVMLHKLPKCIISVFVTILEDDGGVLAAALNCASLALADAAVEMYDVVTASSAGIVNGSVVLDPSREEEQRGDGKLALAYMPSMGRVTYMLQAGKIHHTQLQEAVDLCTDACTGV---IRSLLTASLVQ 249          
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: A0A2E4HNA0_9ARCH (Exosome complex exonuclease Rrp41 n=1 Tax=Thaumarchaeota archaeon TaxID=2026795 RepID=A0A2E4HNA0_9ARCH)

HSP 1 Score: 77.4 bits (189), Expect = 1.190e-13
Identity = 56/206 (27.18%), Postives = 97/206 (47.09%), Query Frame = 0
Query:   15 GSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGYFECEVTYSKHITALGSHQCDNDDITRLR-RISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRNLMSTNLLKRSMN 219
            GS+ +E   + I       + V  H  +  + D    +C      H+    +    N  ++R    IS+++++AIQP++ ++ YP+  + + I +L+S     CA INAAS+ALADA + MRDL  A A    + +   +     +   +  + L ILPNLG  +L Q +G  S E     ++     C ++  L    L+ +  N
Sbjct:   32 GSAIIEFGKNKIIAAVFGPKEV--HPKHMMRNDQAIIKCRY----HMMPFSTDTRKNPSLSRREIEISKVIREAIQPAIIMEDYPRTAIEVYIEILQSDGGSRCAAINAASVALADAGINMRDLITACAAGKADGKIILDVDDVEDKTGEADMPLSILPNLGTITLFQLDGCLSEEEFKQALEMATNGCKKLYELQRNALMNKYFN 231          
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: A0A075HUV5_9ARCH (Exosome complex component Rrp41 n=2 Tax=Thaumarchaeota TaxID=651137 RepID=A0A075HUV5_9ARCH)

HSP 1 Score: 76.6 bits (187), Expect = 2.370e-13
Identity = 43/140 (30.71%), Postives = 77/140 (55.00%), Query Frame = 0
Query:   80 ISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRNLMSTNLLKRSMN 219
            IS+++++A+QP++ ++ YP+  + + + +L+S     CA INAAS ALADA + MRDL  A A   +N +   +     +   +  + + +LPN  L +L Q +G  S E  D  ++     C+++ NL    L ++  N
Sbjct:   92 ISKVIREAVQPAILMENYPRTAIEIYVEILQSDGGSRCAAINAASTALADAGINMRDLVAACAAGKVNGQVVLDVDDQEDKTGEADMPIAMLPNKDLITLFQLDGNLSKEEFDRALELAKIGCNKLYNLQKDALSEKYFN 231          
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: A0A7J4DNQ6_9ARCH (Exosome complex component Rrp41 n=1 Tax=Nitrososphaerales archaeon TaxID=2268197 RepID=A0A7J4DNQ6_9ARCH)

HSP 1 Score: 76.3 bits (186), Expect = 3.280e-13
Identity = 55/203 (27.09%), Postives = 97/203 (47.78%), Query Frame = 0
Query:   15 GSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGYFECEVTYSKHITALGSHQCDNDDITRLR-RISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRNLMSTNLLKR 216
            GS+ +E   + I       + V  H  +    D    +C      H+    +      +I+R    IS+++++A+QP++ ++ YP+  + + I VL+S     CA INAAS ALADA + MRDL  A A   ++ +   +     +   +  + + +LPN GL +L Q +G  S E  D  ++     CD++  L    L ++
Sbjct:   33 GSALIEFGKNKIMAAVFGPKEV--HPKHMMISDRAIIKCRY----HMMPFSTDTRKRPNISRREIEISKVIREALQPAIIMEDYPRTAIEIYIEVLQSDGGSRCAAINAASTALADAGINMRDLVTACAAGKVDGQVVLDVDDTEDKTGEADMPIALLPNTGLITLFQLDGNLSKEEFDKALELAKTGCDKLYKLQRDALSEK 229          
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: A0A3F2RG10_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RG10_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 3.920e-13
Identity = 60/209 (28.71%), Postives = 103/209 (49.28%), Query Frame = 0
Query:   12 GVSGSSYVEMCGSSIACKFLSLR-NVNKHRSYGNQMDNGYFECEVTYSKHITALGSHQCDNDDITRLRRISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSN----EIVDACIDSLVGKCDQIRNLMSTNLLK 215
            G +GS+YVE+  + + C     R +    R + N    G   C+V ++    AL   +   D       +S +V++A+ P++ L K PK ++S+ + VL++      A IN ASLALADA VEM D+  A +   +N     +     E   D K+ L  +P++G  + +   G+  +    E VD C D+  G     R+L++ +L++
Sbjct:   49 GAAGSAYVELGRTRVVCAVYGPRADTRPRREFSND---GQLVCDVKFAPFADALTRRERGQDPDEM--ELSAIVEEALAPAVMLHKLPKCVVSVFVTVLENDGGVFAAAINCASLALADAAVEMYDVVTAASAGIVNSTVVLDPSREEEQRGDGKLALAYMPSMGQVTYMLQAGQIHHTQLQEAVDLCTDACTGVT---RSLLTASLVQ 249          
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: UPI00200B4533 (exosome complex exonuclease Rrp41 n=1 Tax=Methanobacterium alcaliphilum TaxID=392018 RepID=UPI00200B4533)

HSP 1 Score: 75.9 bits (185), Expect = 4.480e-13
Identity = 57/202 (28.22%), Postives = 96/202 (47.52%), Query Frame = 0
Query:   15 GSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGYFECEVTYSKHITALGSHQCDNDDITRLRRISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRNLMSTNLLKR 216
            GS+Y+E  G+ I       R  +  R    + D     C   Y+    ++   +    D  R   IS++  +A+QPS+ L+KYP+ L+ + I VL++     CA I AAS+ALADA + M+D+  A A   +N E   +     +      V + I+P  G  +L+Q++G  + E  +  +D  +  C +I  +    L  R
Sbjct:   40 GSAYLEFGGNKILVAVYGPRESHIRRL--QRPDRANIRCR--YNMAPFSVDDRKRPGPD-RRSVEISKITSEALQPSILLEKYPRSLIDIFIEVLEAEGGTRCAGITAASVALADAGIPMKDMVVACAAGKVNDEVVLDLSEVEDKDGQADVPVAIMPRSGEVTLLQSDGNLTTEEFEKALDLAIEGCQEISKIQKEALKNR 236          
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: A0A654LXI4_9ARCH (Exosome complex component Rrp41 n=11 Tax=Thaumarchaeota TaxID=651137 RepID=A0A654LXI4_9ARCH)

HSP 1 Score: 75.9 bits (185), Expect = 5.120e-13
Identity = 54/204 (26.47%), Postives = 100/204 (49.02%), Query Frame = 0
Query:   15 GSSYVEMCGSSIACKFLSLRNVN-KHRSYGNQMDNGYFECEVTYSKHITALGSHQCDNDDITRLR-RISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRNLMSTNLLKR 216
            GS+Y+E   + I       R V+ KH +  ++       C +    H++   +    N   +R    IS++++++++PSL L  YP+ ++ + + VL++     CA INAAS+ALADA + MRDL  A A   L+     +     +   D  + +  LPNL   +L+Q +G+ +      C++  +  C  +  +    L+K+
Sbjct:   40 GSAYIEFGKNKIIVAVYGPREVHPKHMALPDR-------CVLRCRYHMSPFSTDTRKNPAPSRREVEISKVMRESLEPSLILSDYPRAVIDVFVEVLQADGGSRCAGINAASVALADAGINMRDLVSACAAGRLSDNIVLDINDLEDKEGDADMPVAYLPNLEQVTLLQLDGKLTTTQFSECLEKAISGCKSVYEIQKEALMKK 236          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482S7X5_9ARCH4.500e-2228.10RNase_PH domain-containing protein n=1 Tax=archaeo... [more]
F0WFV6_9STRA1.060e-1530.43Exosome complex exonuclease MTR3like protein putat... [more]
A0A2E7LTA3_9ARCH6.190e-1430.46Exosome complex exonuclease Rrp41 n=2 Tax=Candidat... [more]
D0NP71_PHYIT7.670e-1428.70Exosome complex exonuclease MTR3-like protein n=16... [more]
A0A2E4HNA0_9ARCH1.190e-1327.18Exosome complex exonuclease Rrp41 n=1 Tax=Thaumarc... [more]
A0A075HUV5_9ARCH2.370e-1330.71Exosome complex component Rrp41 n=2 Tax=Thaumarcha... [more]
A0A7J4DNQ6_9ARCH3.280e-1327.09Exosome complex component Rrp41 n=1 Tax=Nitrososph... [more]
A0A3F2RG10_9STRA3.920e-1328.71Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
UPI00200B45334.480e-1328.22exosome complex exonuclease Rrp41 n=1 Tax=Methanob... [more]
A0A654LXI4_9ARCH5.120e-1326.47Exosome complex component Rrp41 n=11 Tax=Thaumarch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 1..218
e-value: 3.6E-27
score: 97.2
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 14..132
e-value: 4.4E-12
score: 46.6
NoneNo IPR availablePANTHERPTHR11953EXOSOME COMPLEX COMPONENTcoord: 13..216
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 11..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9671contigD-dudresnayi_contig9671:10660..11322 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9671.28460.1mRNA_D-dudresnayi_contig9671.28460.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9671 10590..11328 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9671.28460.1 ID=prot_D-dudresnayi_contig9671.28460.1|Name=mRNA_D-dudresnayi_contig9671.28460.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=221bp
MIFQVGTFSSIGVSGSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGY
FECEVTYSKHITALGSHQCDNDDITRLRRISQLVQDAIQPSLYLDKYPKQ
LLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREK
YPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVG
KCDQIRNLMSTNLLKRSMNF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR001247ExoRNase_PH_dom1
IPR020568Ribosomal_S5_D2-typ_fold