prot_D-dudresnayi_contig9591.28379.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9591.28379.1
Unique Nameprot_D-dudresnayi_contig9591.28379.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length139
Homology
BLAST of mRNA_D-dudresnayi_contig9591.28379.1 vs. uniprot
Match: D7FTY7_ECTSI (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTY7_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 8.490e-60
Identity = 96/123 (78.05%), Postives = 109/123 (88.62%), Query Frame = 0
Query:    4 RTGAASGGVDVLKADDGKLGTKLYHAVNLVVLAGVPAAIATSPSALTLPLDVVLGLALPLHAHIGMNYVISDYVPRASRGPARGVMLATSVIAALGLLKLNLTGAGLTETLKATWRTPDKNED 126
            +T +A G   VL ADDGKLGTKLYHAVN+VVLAGVPAA+ATSPSALT+PLD+VLG+A+PLHAHIGMNYVISDYVP+++RG ARG MLA SV+A LGLLKLNLTGAGLTETLKATWR P   E+
Sbjct:   29 KTSSAPGSASVLNADDGKLGTKLYHAVNMVVLAGVPAAVATSPSALTMPLDIVLGIAMPLHAHIGMNYVISDYVPKSARGGARGAMLAASVLATLGLLKLNLTGAGLTETLKATWRGPKPKEE 151          
BLAST of mRNA_D-dudresnayi_contig9591.28379.1 vs. uniprot
Match: W7TCL8_9STRA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCL8_9STRA)

HSP 1 Score: 127 bits (319), Expect = 9.580e-35
Identity = 63/112 (56.25%), Postives = 79/112 (70.54%), Query Frame = 0
Query:   14 VLKADDGKLGTKLYHAVNLVVLAGVPAAIATSPSALTLPLDVVLGLALPLHAHIGMNYVISDYVPRASRGPARGVMLATSVIAALGLLKLNLTGAGLTETLKATWRTPDKNE 125
            +++AD G +GTK YH  N  +L   P A+  SPS LT PLD+ LG+A P+H HIG+NY+ISDYVPRASR  AR V+L  + +  LGLLKLNL+G GLTET K+ WR   K E
Sbjct:   53 LVEADSGAVGTKFYHLSNTALLVAAPLALFLSPSPLTFPLDLFLGVAFPVHGHIGINYIISDYVPRASRPLARYVLLGATTVTVLGLLKLNLSGPGLTETYKSLWRAEKKEE 164          
BLAST of mRNA_D-dudresnayi_contig9591.28379.1 vs. uniprot
Match: A0A835YQL9_9STRA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQL9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.110e-31
Identity = 60/123 (48.78%), Postives = 85/123 (69.11%), Query Frame = 0
Query:    7 AASGGVDVLKADDGKLGTKLYHAVNLVVLAGVPAAIATSPSALTLPLDVVLGLALPLHAHIGMNYVISDYVPRASRGPARGVMLATSVIAALGLLKLNLTGAGLTETLKATWRTPDKNEDSRE 129
            A  G VDV+ AD GKLGT ++H +N  +LA +P  +  +P+ +  P++++L +A PLHAH+ MNYVISDYVPR ++ PAR  ML  + +A+LGL+KL+LTG GL  T+ A W+ P K E   E
Sbjct:   30 ARKGAVDVVNADVGKLGTSMFHYLNYGLLAALPVLL-VAPTPVRTPVELLLAVAFPLHAHVSMNYVISDYVPRFAQQPARIAMLGVTAVASLGLIKLSLTGPGLVSTVGALWKKPAKEEAKEE 151          
BLAST of mRNA_D-dudresnayi_contig9591.28379.1 vs. uniprot
Match: A0A7S2WU59_9STRA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU59_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.780e-29
Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 0
Query:   12 VDVLKADDGKLGTKLYHAVNLVVLAGVPAAIATSPSALTLPLDVVLGLALPLHAHIGMNYVISDYVPR----ASRGPARGVMLATSVIAALGLLKLNLTGAGLTETLKATWR 119
            ++ L AD+G + TKLYH +N+ +L   P A    PS +T PLD+ LG+ +PLH HIGMNYVI+DYVP+    A+RGPAR +ML  + +   GL  LNLTG G+T T+K  W+
Sbjct:   30 MNFLAADEGAMSTKLYHNLNMGLLVVTPPAFLFGPSYVTFPLDLALGVMMPLHGHIGMNYVITDYVPKFFGKAARGPARVIMLGVTGVTMAGLTHLNLTGKGITATIKGLWQ 141          
BLAST of mRNA_D-dudresnayi_contig9591.28379.1 vs. uniprot
Match: A0A7S4HRX2_9EUKA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HRX2_9EUKA)

HSP 1 Score: 107 bits (267), Expect = 2.600e-27
Identity = 57/122 (46.72%), Postives = 77/122 (63.11%), Query Frame = 0
Query:    2 AARTGAASGGVDVLKADDGKLGTKLYHAVNLVVLAGVPAAIATSPSALTLPLDVVLGLALPLHAHIGMNYVISDYVPR----ASRGPARGVMLATSVIAALGLLKLNLTGAGLTETLKATWR 119
            AAR   A G +D++ AD       L+H  NL +L   P A   SPSAL +P+D+ L +ALP H H+GMN V++DYV +     + GPAR +ML  S   ALGL+KLN+TG G+TE +K+ WR
Sbjct:    5 AARPAPAQGTIDMVNADGSGKMVALWHKCNLAILGLTPLAFVLSPSALNMPIDMALAIALPFHGHVGMNMVLTDYVKKIFGKGAVGPARYLMLGISGTTALGLIKLNVTGVGVTEVIKSLWR 126          
BLAST of mRNA_D-dudresnayi_contig9591.28379.1 vs. uniprot
Match: W4GD77_9STRA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GD77_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.220e-27
Identity = 54/112 (48.21%), Postives = 79/112 (70.54%), Query Frame = 0
Query:   14 VLKADDGKLGTKLYHAVNLVVLAGVPAAIATSPSALTLPLDVVLGLALPLHAHIGMNYVISDYVPRASRGPARGVMLATSVIAALGLLKLNLTGAGLTETLKATWRTPDKNE 125
            VL AD+ K  +K+ H  +  +LA VPAA+  SPSAL +P+D +L + +P+H+HIG+N V+SDYVP+  +  AR  +L  S++  LGL+ LN+TGAG+TET+K+ WR P   E
Sbjct:   41 VLNADNSKHTSKVMHYTSYGLLALVPAAVVLSPSALNVPVDYLLAVLVPVHSHIGINNVVSDYVPKNFKTLARAGVLGASIVTFLGLITLNVTGAGVTETVKSLWREPPSKE 152          
BLAST of mRNA_D-dudresnayi_contig9591.28379.1 vs. uniprot
Match: A0A2D4BN75_PYTIN (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BN75_PYTIN)

HSP 1 Score: 107 bits (267), Expect = 6.320e-27
Identity = 59/122 (48.36%), Postives = 77/122 (63.11%), Query Frame = 0
Query:    9 SGGVDVLKADDGKLGTKLYHAVNLVVLAGVPAAIATSPSALTLPLDVVLGLALPLHAHIGMNYVISDYVPRASRGPARGVMLATSVIAALGLLKLNLTGAGLTETLKATWRTPDKNEDSRED 130
            SG   VL+AD+     K+YH  +L +L  VPAA   SPS L++P+D  LG+ +P+HAHIGMN VISDYVP+A R  AR   L  + +  LG+L+ N+ G GLTETLK  WR   K    + D
Sbjct:   41 SGLAGVLEADNATFSHKVYHLSSLALLGLVPAAFVLSPSVLSVPVDYALGVIIPVHAHIGMNNVISDYVPKAHRTLARLAWLGVTGVMFLGILRNNIEGPGLTETLKTFWREDPKKAAKKHD 162          
BLAST of mRNA_D-dudresnayi_contig9591.28379.1 vs. uniprot
Match: A0A7S3PKA9_9STRA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PKA9_9STRA)

HSP 1 Score: 106 bits (265), Expect = 9.370e-27
Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 0
Query:   25 KLYHAVNLVVLAGVPAAIATSPSALTLPLDVVLGLALPLHAHIGMNYVISDYVPRASRGPARGVMLATSVIAALGLLKLNLTGAGLTETLKATWRTPDKNE 125
            KL+H  NL V+   P AI   PS L++P+DV L +  PLHAH+GMN + +DYVP +  GPAR  +LA SV++ +GLLKL ++  G+T TLKA W+ P K E
Sbjct:   50 KLFHKTNLAVMVLTPLAIVAHPSPLSMPVDVALAIVFPLHAHMGMNIIFTDYVPGSPTGPARMALLAVSVLSTIGLLKLAVSEDGITGTLKAVWKEPKKEE 150          
BLAST of mRNA_D-dudresnayi_contig9591.28379.1 vs. uniprot
Match: A0A8J2SY23_9STRA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SY23_9STRA)

HSP 1 Score: 103 bits (258), Expect = 4.750e-26
Identity = 53/102 (51.96%), Postives = 68/102 (66.67%), Query Frame = 0
Query:   22 LGTKLYHAVNLVVLAGVPAAIATSPSALTLPLDVVLGLALPLHAHIGMNYVISDYVPR----ASRGPARGVMLATSVIAALGLLKLNLTGAGLTETLKATWR 119
            L  K+YH VNL +L   P A+AT  + L+ P+D+ L +  PLH HIGMNYVI+DYVP+    A+ GPAR VM+  +    LGL KLN+ G G+T TLKA WR
Sbjct:   19 LAVKVYHRVNLALLGATPVALATDNTFLSFPVDMGLAIMFPLHGHIGMNYVITDYVPKLFSKAAVGPARAVMVGVTGFTMLGLTKLNVEGPGITGTLKALWR 120          
BLAST of mRNA_D-dudresnayi_contig9591.28379.1 vs. uniprot
Match: A0A6G0X8T0_9STRA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8T0_9STRA)

HSP 1 Score: 104 bits (259), Expect = 8.410e-26
Identity = 52/108 (48.15%), Postives = 72/108 (66.67%), Query Frame = 0
Query:   14 VLKADDGKLGTKLYHAVNLVVLAGVPAAIATSPSALTLPLDVVLGLALPLHAHIGMNYVISDYVPRASRGPARGVMLATSVIAALGLLKLNLTGAGLTETLKATWRTP 121
            VL AD+    TK  H  +L +LA VP A+  SPSAL +P+D  L   +P+H HIG+N V+SDY+P+  +G  R  +L  SV+  +GLL LN+TGAG+TE++KA W  P
Sbjct:   40 VLNADNSVYTTKAMHLTSLALLALVPTAVVLSPSALNVPVDYALAALIPIHGHIGLNGVLSDYLPKNVQGLGRVAVLGVSVVTFVGLLSLNITGAGITESVKAIWIEP 147          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9591.28379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTY7_ECTSI8.490e-6078.05Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
W7TCL8_9STRA9.580e-3556.25Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
A0A835YQL9_9STRA4.110e-3148.78Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
A0A7S2WU59_9STRA2.780e-2950.00Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
A0A7S4HRX2_9EUKA2.600e-2746.72Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
W4GD77_9STRA5.220e-2748.21Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
A0A2D4BN75_PYTIN6.320e-2748.36Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
A0A7S3PKA9_9STRA9.370e-2750.50Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
A0A8J2SY23_9STRA4.750e-2651.96Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
A0A6G0X8T0_9STRA8.410e-2648.15Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034804Fumarate reductase/succinate dehydrogenase, transmembrane subunitGENE3D1.20.1300.10coord: 20..119
e-value: 1.2E-17
score: 65.8
IPR034804Fumarate reductase/succinate dehydrogenase, transmembrane subunitSUPERFAMILY81343Fumarate reductase respiratory complex transmembrane subunitscoord: 40..98
NoneNo IPR availablePFAMPF05328CybScoord: 29..118
e-value: 5.3E-11
score: 42.3
NoneNo IPR availablePANTHERPTHR13337:SF2SUCCINATE DEHYDROGENASE [UBIQUINONE] CYTOCHROME B SMALL SUBUNIT, MITOCHONDRIALcoord: 17..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 74..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..73
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 106..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..105
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
NoneNo IPR availableTMHMMTMhelixcoord: 88..110
IPR007992Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, CybSPANTHERPTHR13337SUCCINATE DEHYDROGENASEcoord: 17..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9591contigD-dudresnayi_contig9591:5770..7582 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9591.28379.1mRNA_D-dudresnayi_contig9591.28379.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9591 5770..8473 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9591.28379.1 ID=prot_D-dudresnayi_contig9591.28379.1|Name=mRNA_D-dudresnayi_contig9591.28379.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=139bp
SAARTGAASGGVDVLKADDGKLGTKLYHAVNLVVLAGVPAAIATSPSALT
LPLDVVLGLALPLHAHIGMNYVISDYVPRASRGPARGVMLATSVIAALGL
LKLNLTGAGLTETLKATWRTPDKNEDSREDDKDAKPKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034804SQR/QFR_C/D
IPR007992CybS