prot_D-dudresnayi_contig9573.28361.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9573.28361.1
Unique Nameprot_D-dudresnayi_contig9573.28361.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length264
Homology
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BLAST of mRNA_D-dudresnayi_contig9573.28361.1 vs. uniprot
Match: D8LRK0_ECTSI (Nucleosome/chromatin assembly factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK0_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 3.230e-22
Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = 0 
Query:   88 PPFPVMVVEALLALSDSRGSSQLAMVNWMKKGI-YAPVAMP-DEAKFKANVAAGIKQAIEDGKVVKVRTNYRISSEHAKTLPIPLKVK 173
            P FP MVVEAL ALSDSRGSS+LA V W+K    Y  +A P DEAKFKANVAAG+KQA+E+GKVV+VRTNYRIS +HA+ L + L  K
Sbjct:  181 PSFPDMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQALEEGKVVQVRTNYRISPDHARALSLGLPTK 268
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BLAST of mRNA_D-dudresnayi_contig9573.28361.1 vs. uniprot
Match: A0A6H5JBK5_9PHAE (WHIM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBK5_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.160e-9
Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = 0 
Query:   88 PPFPVMVVEALLALSDSRGSSQLAMVNWMKKGI-YAPVAMP-DEAKFKANVAAGIKQ 142
            P FP MVVEAL ALSDSRGSS+LA V W+K    Y  +A P DEAKFKANVAAG+KQ
Sbjct:  103 PSFPDMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQ 159
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9573.28361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRK0_ECTSI3.230e-2267.05Nucleosome/chromatin assembly factor group n=1 Tax... [more]
A0A6H5JBK5_9PHAE1.160e-970.18WHIM1 domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 84..155
e-value: 0.0033
score: 21.8
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 87..153
e-value: 1.1E-7
score: 32.1
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 86..160
score: 16.786
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 83..200
e-value: 5.7E-6
score: 28.4
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 85..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9573contigD-dudresnayi_contig9573:1438..2525 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9573.28361.1mRNA_D-dudresnayi_contig9573.28361.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9573 1437..2525 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9573.28361.1 ID=prot_D-dudresnayi_contig9573.28361.1|Name=mRNA_D-dudresnayi_contig9573.28361.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=264bp
STLSPPPTSGNKKSAKIVGGAPNWSAKKGSGGVSGSGACKEAVNVKAPSG
SKKNAKSVGGAPDWSAKKGSSGVSGSGACKEAVDVKHPPFPVMVVEALLA
LSDSRGSSQLAMVNWMKKGIYAPVAMPDEAKFKANVAAGIKQAIEDGKVV
KVRTNYRISSEHAKTLPIPLKVKIKGSKGSKGNVKRKDKENDKGKEKDEE
QEQDKETATDSITEVPATKKFKSIGRHKSPEPDGTSDAAGRKEEPGVVGT
GESSSGGARSGGSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf