prot_D-dudresnayi_contig9560.28348.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9560.28348.1
Unique Nameprot_D-dudresnayi_contig9560.28348.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length171
Homology
BLAST of mRNA_D-dudresnayi_contig9560.28348.1 vs. uniprot
Match: D8LMF2_ECTSI (Similar to Isochorismate Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF2_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 1.600e-51
Identity = 101/169 (59.76%), Postives = 114/169 (67.46%), Query Frame = 0
Query:    8 GGGIFSFLPIADPRHRDAFSPLFDTPHAVNFEGVCRSMGFVYRRASTATEFQKAFLKSQDSGAGQGR----------HFFIEAVTSREDNVPAHRSLSQIGKTAALKQLLRGVRLGWEFTPTPPMRASSEGVLGGGQTGCSEGGILEG-GEGGRQMPTLVLLHGFMGSK 165
            GGGIFSFLPIAD RH DAFSPLFDTPH+V+FEGVC SMG  YRRA+TA EF+ A+L+SQ    G             HFFIEAVT RE+N+P HRSL  IG+ AAL  LLRGVRLGWEFTP P  R            G S G +  G G G ++ PTL+LLHGFMGSK
Sbjct: 1519 GGGIFSFLPIADARHGDAFSPLFDTPHSVDFEGVCLSMGLEYRRATTAREFRSAYLESQGVLGGXXXXXXXXXXXXXHFFIEAVTCREENLPVHRSLGGIGRAAALDHLLRGVRLGWEFTPAPVARTWPPSPA-----GVSNGSLGRGRGGGDKKKPTLLLLHGFMGSK 1682          
BLAST of mRNA_D-dudresnayi_contig9560.28348.1 vs. uniprot
Match: A0A835ZAA5_9STRA (Thiamine diphosphate-binding protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA5_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.410e-28
Identity = 71/167 (42.51%), Postives = 85/167 (50.90%), Query Frame = 0
Query:    8 GGGIFSFLPIADPRHRDAFSPLFDTPHAVNFEGVCRSMGFVYRRASTATEFQKAFLKSQDSGAGQG---------RHFFIEAVTSREDNVPAHRSLSQIGKTAALKQLLRGVRLGWEFTPTPPMRASSEGVLGGGQTGCSEGGILEGGEGGRQMPTLVLLHGFMGSK 165
            G  IFSFLPIA  RH D FSP FDTPH ++FEGVC + G  Y RA+T  EF++ + +SQ                +H FIEAVT R DNV  HR L     TAA   LL  V L W+            G L  G++         G  G     T+VLLHGFMGS+
Sbjct:  114 GSAIFSFLPIA--RHADVFSPYFDTPHDLSFEGVCSTFGVRYARATTPQEFERIYRESQQPQXXXXXXXXXTTTVQHLFIEAVTDRADNVQVHRQLGAAATTAAHHVLLNDVHLAWDLH-------LPGGTLHSGRSSSXXXXXXRGARG-----TVVLLHGFMGSR 266          
BLAST of mRNA_D-dudresnayi_contig9560.28348.1 vs. uniprot
Match: A0A6H5JV35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV35_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 9.230e-21
Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    9 GGIFSFLPIADPRHRDAFSPLFDTPHAVNFEGVCRSMGFVYRRASTATEFQKAFLKSQ 66
            GGIFSFLPIAD RH DAFSPLFDTPH+V+FEGVC SMG  YRRA+TA EF+ A+L+SQ
Sbjct: 1273 GGIFSFLPIADARHGDAFSPLFDTPHSVDFEGVCLSMGLEYRRATTAREFRSAYLESQ 1330          
BLAST of mRNA_D-dudresnayi_contig9560.28348.1 vs. uniprot
Match: A0A0G4GZP4_VITBC (MR_MLE domain-containing protein n=5 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GZP4_VITBC)

HSP 1 Score: 97.4 bits (241), Expect = 2.390e-20
Identity = 64/162 (39.51%), Postives = 78/162 (48.15%), Query Frame = 0
Query:    8 GGGIFSFLPIADPRHRDAFSPLFDTPHAVNFEGVCRSMGFVYRRASTATEFQKAFLKSQDSGAGQGRHFF---IEAV-TSREDNVPAHRSLSQIGKTAALKQLLRGVRLGWEFTPTPPMRASSEGVLGGGQTGCSEGGILEGGEGGRQMPTLVLLHGFMGSK 165
            GGGIF FLPIA   H+D FSPLFDTPH V+FEG+C S+G  Y R  T+ E          S A  G+  F   IEAV T RE NV  HR + +    A +  L R +R  W                   + GC            R  PT+V LHG++GSK
Sbjct: 1226 GGGIFHFLPIA--AHKDVFSPLFDTPHDVSFEGICASVGLPYSRVKTSEEL---------SAAVSGKSAFPRVIEAVCTDRESNVSIHRDIQRAAGDAVVTHLARSIRWCWW------------------RGGC------------RDSPTVVFLHGWLGSK 1346          
BLAST of mRNA_D-dudresnayi_contig9560.28348.1 vs. uniprot
Match: A0A7S3VTC1_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VTC1_DUNTE)

HSP 1 Score: 82.0 bits (201), Expect = 4.750e-16
Identity = 47/104 (45.19%), Postives = 61/104 (58.65%), Query Frame = 0
Query:    8 GGGIFSFLPIADPRHRDAFSPLFDTPHAVNFEGVCRSMGFVYRRASTATEFQKAFLKSQDSGAGQGRHFFIEAVTSREDNVPAHRSLSQIGKTA-----ALKQL 106
            GGGIFSFLPIA+      F+ L+ TP  V+ EG+CR+ G  ++RAST  E+Q+A     +S  G  RH  +E VT R  NV  HR L Q  + A     AL+QL
Sbjct:  116 GGGIFSFLPIANAMPEQQFTQLWATPQNVDLEGMCRAHGIPHQRASTPEEYQQAL----NSAWGLNRHSVVEVVTGRSANVDVHRMLQQRVRRATHAYLALRQL 215          
BLAST of mRNA_D-dudresnayi_contig9560.28348.1 vs. uniprot
Match: E1Z4H3_CHLVA (MR_MLE domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z4H3_CHLVA)

HSP 1 Score: 81.3 bits (199), Expect = 1.020e-14
Identity = 53/123 (43.09%), Postives = 69/123 (56.10%), Query Frame = 0
Query:    8 GGGIFSFLPIADPRHRDAFSPLFDTPHAVNFEGVCRSMGFVYRRASTATEFQKAFLKSQDSGAGQGRHFFIEAVTSREDNVPAHRSLSQIGKTAALKQLLRGVRLGWEFTPTPPMRASSEGVL 130
            GGGIFSFLPIA+    D F+PL+ TP  V+ EG+CR+ G  ++   TA E   A L+S     G  RH  IE VTSR  N+  HR + Q G   A+   LR +    E  P+ P  +SS G+L
Sbjct: 1341 GGGIFSFLPIAEALPEDVFTPLWATPQHVDLEGMCRAHGIPHQTV-TAAEGLPAALRS---AWGSNRHSVIEVVTSRTSNLQRHREI-QAGVKEAVGAALRLL----EQPPSGPEASSSAGLL 1454          
BLAST of mRNA_D-dudresnayi_contig9560.28348.1 vs. uniprot
Match: A0A7S1FDF8_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FDF8_NOCSC)

HSP 1 Score: 80.5 bits (197), Expect = 1.810e-14
Identity = 42/107 (39.25%), Postives = 54/107 (50.47%), Query Frame = 0
Query:    8 GGGIFSFLPIADPRHRDAFSPLFDTPHAVNFEGVCRSMGFVYRRASTATEFQKAFLKSQDSGAGQGRHFFIEAVTSREDNVPAHRSLSQIGKTAALKQLLRGVRLGW 114
            GGGIFSFLPIA  +HRD FSP FD PH V+F   C + G  Y   ST  EF  A+ K+Q S +            S  +N   H+ + Q+        +L  V+L W
Sbjct: 1059 GGGIFSFLPIA--QHRDVFSPCFDEPHRVDFGAACGAFGLRYTCCSTLDEFTLAYSKAQGSSSSGACVIEARVALSHSENAALHKKIGQVVAARVRAAILCQVQLSW 1163          
BLAST of mRNA_D-dudresnayi_contig9560.28348.1 vs. uniprot
Match: A0A2P6V409_9CHLO (Chloroplastic isoform X2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V409_9CHLO)

HSP 1 Score: 78.2 bits (191), Expect = 1.200e-13
Identity = 43/99 (43.43%), Postives = 55/99 (55.56%), Query Frame = 0
Query:    8 GGGIFSFLPIADPRHRDAFSPLFDTPHAVNFEGVCRSMGFVYRRASTATEFQKAFLKSQDSGAGQGRHFFIEAVTSREDNVPAHRSLSQIGKTAALKQL 106
            GGGIFSFLPIAD    D F+PL+ TP  V+ EG+CR+ G  +++   A + + A      S  G  RH  IE VTSR  NV  HR +    K A  + L
Sbjct: 1283 GGGIFSFLPIADALPEDVFTPLWATPQHVDLEGMCRAHGIPHQKVVAAEDLEGALR----SAWGCNRHSVIEVVTSRLTNVDRHREIQTAVKHAVSRTL 1377          
BLAST of mRNA_D-dudresnayi_contig9560.28348.1 vs. uniprot
Match: A0A2P6TX44_CHLSO (Chloroplastic isoform X3 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TX44_CHLSO)

HSP 1 Score: 75.5 bits (184), Expect = 1.030e-12
Identity = 42/99 (42.42%), Postives = 53/99 (53.54%), Query Frame = 0
Query:    8 GGGIFSFLPIADPRHRDAFSPLFDTPHAVNFEGVCRSMGFVYRRASTATEFQKAFLKSQDSGAGQGRHFFIEAVTSREDNVPAHRSLSQIGKTAALKQL 106
            GGGIFSFLPIA     D F+PL+ TP  V+ EG+CR+ G  ++R +   +   A      S  G  RH  IE VTSR  NV  HR +    K A  + L
Sbjct: 1374 GGGIFSFLPIAQALPEDVFTPLWATPQHVDLEGMCRAHGIPHQRVTGVEDLGIALR----SAWGCNRHSVIEVVTSRHTNVQRHREVQDAVKQAVSRAL 1468          
BLAST of mRNA_D-dudresnayi_contig9560.28348.1 vs. uniprot
Match: I0Z960_COCSC (Thiamin diphosphate-binding protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z960_COCSC)

HSP 1 Score: 73.9 bits (180), Expect = 3.210e-12
Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 0
Query:    8 GGGIFSFLPIADPRHRDAFSPLFDTPHAVNFEGVCRSMGFVYRRASTATEFQKAFLKSQDSGAGQGRHFFIEAVTSREDNVPAHRSLSQIGKTAALKQL 106
            GGGIFSFLPIAD    D FS L+ TP  V+  G+CR+ G  ++R +   + +KA      +     +H  +E +T R+ NV  HRS+ +  + + L+ L
Sbjct:  600 GGGIFSFLPIADQLPPDTFSQLWATPQNVDLAGMCRAHGIAHQRVTERVDLRKAL----QAAWALNKHSVVEVITKRDSNVGHHRSIQERVRQSLLRAL 694          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9560.28348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMF2_ECTSI1.600e-5159.76Similar to Isochorismate Synthase n=1 Tax=Ectocarp... [more]
A0A835ZAA5_9STRA7.410e-2842.51Thiamine diphosphate-binding protein (Fragment) n=... [more]
A0A6H5JV35_9PHAE9.230e-2177.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4GZP4_VITBC2.390e-2039.51MR_MLE domain-containing protein n=5 Tax=Vitrella ... [more]
A0A7S3VTC1_DUNTE4.750e-1645.19Hypothetical protein (Fragment) n=1 Tax=Dunaliella... [more]
E1Z4H3_CHLVA1.020e-1443.09MR_MLE domain-containing protein n=1 Tax=Chlorella... [more]
A0A7S1FDF8_NOCSC1.810e-1439.25Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]
A0A2P6V409_9CHLO1.200e-1343.43Chloroplastic isoform X2 n=1 Tax=Micractinium cond... [more]
A0A2P6TX44_CHLSO1.030e-1242.42Chloroplastic isoform X3 n=1 Tax=Chlorella sorokin... [more]
I0Z960_COCSC3.210e-1237.37Thiamin diphosphate-binding protein (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.970coord: 4..105
e-value: 7.7E-18
score: 66.6
IPR0044332-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthasePANTHERPTHR42916FAMILY NOT NAMEDcoord: 8..103
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 30..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9560contigD-dudresnayi_contig9560:7588..10540 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9560.28348.1mRNA_D-dudresnayi_contig9560.28348.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9560 7588..10840 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9560.28348.1 ID=prot_D-dudresnayi_contig9560.28348.1|Name=mRNA_D-dudresnayi_contig9560.28348.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=171bp
MSVLSVIGGGIFSFLPIADPRHRDAFSPLFDTPHAVNFEGVCRSMGFVYR
RASTATEFQKAFLKSQDSGAGQGRHFFIEAVTSREDNVPAHRSLSQIGKT
AALKQLLRGVRLGWEFTPTPPMRASSEGVLGGGQTGCSEGGILEGGEGGR
QMPTLVLLHGFMGSKVRDAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004433MenaQ_synth_MenD
IPR029061THDP-binding