prot_D-dudresnayi_contig9436.28239.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9436.28239.1
Unique Nameprot_D-dudresnayi_contig9436.28239.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length578
Homology
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BLAST of mRNA_D-dudresnayi_contig9436.28239.1 vs. uniprot
Match: A0A6H5KC47_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KC47_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 1.640e-54
Identity = 102/169 (60.36%), Postives = 124/169 (73.37%), Query Frame = 0 
Query:  410 DVMEGQSGNVLAALAVVNDTAAGTGEMLTYFRRMSDEYVGVRHAGVLAMFASVAVCGAAGMVGITAGLTNIKPCAPCINLLGLTCVVAVTATWMAFALSSLLFIGTVAWSDGCHFLALAARRGWETAGLDGQSAAVLDGCFRGRSVADEFNLTEALGFFDSYVVIADEV 578
            D M+GQS NV+AALA+ N+TA    +   YFRR SDEY GVR AGV  + A+V + GA G++G+ AGL   K C+PCINLL LTC V  T TW +F LSSL+ +G V WSDGC FL LAA RGWET G+DG SAAVLDGC RG +V +EFN+T+ALGFF+SY   A+EV
Sbjct:    3 DRMKGQSLNVIAALALANETALENRDRFAYFRRWSDEYAGVRTAGVQGLVAAVGISGAVGLLGVAAGLAKGKACSPCINLLRLTCAVTFTTTWASFILSSLVIVGAVTWSDGCQFLNLAATRGWETVGVDGLSAAVLDGCLRGNAVTEEFNITDALGFFESYPGTAEEV 171
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9436.28239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KC47_9PHAE1.640e-5460.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 478..488
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 489..513
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..277
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..207
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 278..452
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 453..477
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 208..231
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 232..258
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 514..578
NoneNo IPR availableTMHMMTMhelixcoord: 455..477
NoneNo IPR availableTMHMMTMhelixcoord: 484..506
NoneNo IPR availableTMHMMTMhelixcoord: 259..278
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 418..440
NoneNo IPR availableTMHMMTMhelixcoord: 207..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9436contigD-dudresnayi_contig9436:4955..11249 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9436.28239.1mRNA_D-dudresnayi_contig9436.28239.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9436 4685..11249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9436.28239.1 ID=prot_D-dudresnayi_contig9436.28239.1|Name=mRNA_D-dudresnayi_contig9436.28239.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=578bp
MLAALVWRSGQFAVTTAVFLLLGIVAIVSWGSLPSRQGRQQEESQSLPVT
LWPAYRHAVGRQVILANADDALDETCAARGIADQEVVAVVENNSLPLGMT
IATMLTKDTLWYEDTLEDLLVEYCEETRPNVHSRYVTSDNITAAKDDQGN
CVQVSDGDGDAYAAGLCETTGNCYWEEPREGQTRNRRYTDEQYAAEEDAA
RDYMEDIVLNYGTLGFVLAAAVFVGCVRFSILRGVYNKCVCDGDLQRERV
GYTATEQKAPAAVFVVGLAVVVVAGLLGSQGNKSVSDGLDVMFETMDEAS
DDMRELVSSVSSPLGSFVDTLDNSTGEVQLLLAATDEWLGELEAGLTLRL
DAFDSAHRHRFQGRGAEFDTLAAGVEDAGASFVSDVVDTISAALDVVQVR
GLEEFLDARDVMEGQSGNVLAALAVVNDTAAGTGEMLTYFRRMSDEYVGV
RHAGVLAMFASVAVCGAAGMVGITAGLTNIKPCAPCINLLGLTCVVAVTA
TWMAFALSSLLFIGTVAWSDGCHFLALAARRGWETAGLDGQSAAVLDGCF
RGRSVADEFNLTEALGFFDSYVVIADEV
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