prot_D-dudresnayi_contig10448.488.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10448.488.1
Unique Nameprot_D-dudresnayi_contig10448.488.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length260
Homology
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BLAST of mRNA_D-dudresnayi_contig10448.488.1 vs. uniprot
Match: D8LQU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQU7_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 1.250e-9
Identity = 46/135 (34.07%), Postives = 71/135 (52.59%), Query Frame = 0 
Query:   71 ESQNVSIKCATGTVENNS--ITLETFLTSRELQMGHVDIVWAGDLSWEIETRTESQGFREVSSAGEDNVIFAVTGVFLLISVLFISRTSNCCCRTVRGEIDLVAANDFFSTMGSLVERLAVVLIVGQASVYFKLS 203
            +S  VS++CA GT+++ +  +TL  FL S  LQ   V +V AG+  WE E    ++ F +    GED +     G+ +L+ V+  +    CC     G+I        F+T GSLV R+A+VLI  Q S++   S
Sbjct:    5 DSPFVSLQCAEGTLDDGAPEVTLANFLASPGLQADRVHVVGAGEFPWETEEEITTEFFTDQEWEGEDALTLFALGL-VLVGVVVGAICEQCCSD---GKISRNVGA--FATAGSLVGRIALVLITAQGSIFLATS 133
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10448.488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQU7_ECTSI1.250e-934.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..154
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 155..182
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 222..241
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 242..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..202
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 203..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..136
NoneNo IPR availableTMHMMTMhelixcoord: 137..154
NoneNo IPR availableTMHMMTMhelixcoord: 220..242
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10448contigD-dudresnayi_contig10448:3734..4985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10448.488.1mRNA_D-dudresnayi_contig10448.488.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10448 3665..5080 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10448.488.1 ID=prot_D-dudresnayi_contig10448.488.1|Name=mRNA_D-dudresnayi_contig10448.488.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=260bp
MRTWDQDVHHSLAQSVAIGILESAVMGTFFTNGLSGNPYLSAHTVNDDLS
PPALLSAVALATANNRSITTESQNVSIKCATGTVENNSITLETFLTSREL
QMGHVDIVWAGDLSWEIETRTESQGFREVSSAGEDNVIFAVTGVFLLISV
LFISRTSNCCCRTVRGEIDLVAANDFFSTMGSLVERLAVVLIVGQASVYF
KLSVHEDASGKNNDLTSAVASVYKIISWTLLLLIFFGDAIFAPECWFPSG
RVISYPRKE*
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