prot_D-dudresnayi_contig10437.473.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10437.473.1
Unique Nameprot_D-dudresnayi_contig10437.473.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length350
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig10437.473.1 vs. uniprot
Match: A0A6H5KU49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU49_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.180e-16
Identity = 53/100 (53.00%), Postives = 61/100 (61.00%), Query Frame = 0 
Query:    3 LSAFSSLEAHNGCRALFNHAKGWAYIGPAGPIDSADFP-GTVAYEYK----GKTPSSATRGGAPPPAXXXQPTRPGDGLGRKTNEARLAYLDAADLEHLV 97
            LSAF+S +AHNGCRALFN  +GWAY GPAG ID    P GTV+Y YK    G T +S +  G           +PGD L RK+NE R  Y DA DL HLV
Sbjct:   16 LSAFTSGDAHNGCRALFNGTEGWAYFGPAGEIDEGALPAGTVSYPYKSGMFGMT-ASGSGSGRDGGGTSQAAKKPGDDLSRKSNEMRGVYFDAKDLAHLV 114
[Close]
BLAST of mRNA_D-dudresnayi_contig10437.473.1 vs. uniprot
Match: D8LKD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD3_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.240e-14
Identity = 55/106 (51.89%), Postives = 61/106 (57.55%), Query Frame = 0 
Query:    3 LSAFSSLEAHNGCRALFNHAKGWAYIGPAGPIDSADFP-GTVAYEYK---------GKTPSSATRGGAPPPAXXXQPTR-PGDGLGRKTNEARLAYLDAADLEHLV 97
            LSAF+S +AHNGCRALFN   GWAY GPAG ID    P GTV+Y Y          G T S +         XXXQ  + PGD L RK+NE R  Y DA DL HLV
Sbjct:   16 LSAFTSGDAHNGCRALFNGTAGWAYFGPAGEIDEGALPAGTVSYPYNVKGDKSGLFGVTASGSGXXXXXXXXXXXQAAKKPGDDLNRKSNEMRGVYFDAKDLAHLV 121
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10437.473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU49_9PHAE1.180e-1653.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKD3_ECTSI1.240e-1451.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10437contigD-dudresnayi_contig10437:7597..9597 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10437.473.1mRNA_D-dudresnayi_contig10437.473.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10437 7597..9597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10437.473.1 ID=prot_D-dudresnayi_contig10437.473.1|Name=mRNA_D-dudresnayi_contig10437.473.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=350bp
MSLSAFSSLEAHNGCRALFNHAKGWAYIGPAGPIDSADFPGTVAYEYKGK
TPSSATRGGAPPPAPPPQPTRPGDGLGRKTNEARLAYLDAADLEHLVHHA
ERFSSPPCSAVPGDGLEEGGDGDSGGGGGAEGPQEVLRRGRPIVLTLQAI
LAATTSSPRSPATSPSATADVTVGDGEGSTATVISATAGEEGGVGDSGDE
TVNHPPRVSDYADFPPLRGTRTTTGLLLAPPITMMKRRKKRQPAASGAAA
VSTKAVVDREYEDDAGGVSCSEAVAATSVAAAAHDGGAVAAVAVAVALQR
AANTSAAVGEGGSKASARNAGREDEDPYYARKRVGAFAFKTKPRGKAHK*
back to top