prot_D-dudresnayi_contig10425.462.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10425.462.1
Unique Nameprot_D-dudresnayi_contig10425.462.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length269
Homology
BLAST of mRNA_D-dudresnayi_contig10425.462.1 vs. uniprot
Match: D8LSJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ6_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 9.910e-74
Identity = 126/145 (86.90%), Postives = 132/145 (91.03%), Query Frame = 0
Query:  125 PDMASLSSENPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRQMVDDDHGGGLQPDAVTYTSLIKAAARAAPPRVKEAEEIFATMQQRTNHFSTFARPTEVTYAHLMNASIMAGDFNRALEVWRRQLS 269
            P   S  + NPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVR MVDD  GGGLQPDAVTYTSLIKAAARA PPRV+EAEEIFATMQQRTNHFSTFARPTEVTYAHLM AS+MA D+ RALE+WR+QLS
Sbjct:  860 PSSTSSDNANPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLIKAAARAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAEDYGRALEIWRQQLS 1004          
BLAST of mRNA_D-dudresnayi_contig10425.462.1 vs. uniprot
Match: A0A836CEM1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM1_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.340e-38
Identity = 77/142 (54.23%), Postives = 105/142 (73.94%), Query Frame = 0
Query:  128 ASLSSENPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRQMVDDDHGGGLQPDAVTYTSLIKAAARAAPPRVKEAEEIFATMQQRTNHFSTFARPTEVTYAHLMNASIMAGDFNRALEVWRRQLS 269
            + ++  +PA DNLFRVFLVF EM+S+GV+PD  AYNAL+N+CA +G+ +RA+ V+RQM +D+H   L PDA+T+TSLIK AA A       AEEIFA MQQRTNHFSTF RP+E T+ H++ A++    F+R  E+W + L+
Sbjct:  648 SQMTHSDPAADNLFRVFLVFGEMKSQGVQPDRPAYNALINSCAAVGDLERAMAVLRQMYEDEHC--LPPDAITFTSLIKTAAAA--HNADAAEEIFAAMQQRTNHFSTFHRPSERTFRHMITANMNIKRFSRVQELWAQMLA 785          
BLAST of mRNA_D-dudresnayi_contig10425.462.1 vs. uniprot
Match: A0A7S0XEC2_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEC2_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.660e-20
Identity = 52/113 (46.02%), Postives = 76/113 (67.26%), Query Frame = 0
Query:  138 DNLFRVFLVFQEMR-SRGVRPDLRAYNALVNTCADLGEFDRALGVVRQMVDDDHGGGLQPDAVTYTSLIKAAA-RAAPPRVKEAEEIFATMQQRTNHFSTFARPTEVTYAHLM 248
            D+LFR++LVFQEM+ +  ++ D   YN L+N CA +G+ DRAL  +  M ++    G++P+ +TYTSLIKA A  +    ++ AE IF  MQQR+NHFS + +P E+TY  LM
Sbjct:  173 DDLFRLYLVFQEMKYNPAIQLDTAVYNTLINACAGVGDIDRALETMTAMQEN----GIEPNVITYTSLIKACAFNSRNEMIELAENIFNEMQQRSNHFSNYIQPNEMTYEKLM 281          
BLAST of mRNA_D-dudresnayi_contig10425.462.1 vs. uniprot
Match: A0A0G4F8K7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F8K7_VITBC)

HSP 1 Score: 72.4 bits (176), Expect = 1.070e-10
Identity = 46/136 (33.82%), Postives = 65/136 (47.79%), Query Frame = 0
Query:  129 SLSSENPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRQMVDDDHGGGLQPDAVTYTSLIKAAARAAPPRVKEAEEIFATMQQRTNHFSTFARPTEVTYAHLMNASIMAGDFNRALEVW 264
            SL  ++   +NLFR+FLVFQEM+S GV+PDL AYN L++ C   GE ++A+ V                                     A      MQQRTNHF++   P+E+T+  LM A+  A    R  E++
Sbjct:  633 SLEEQHYYRENLFRIFLVFQEMQSSGVQPDLCAYNTLLDACGRAGEVEKAMEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTA------MQQRTNHFASCVLPSELTFKQLMLANRNAYRLRRVFELF 762          
BLAST of mRNA_D-dudresnayi_contig10425.462.1 vs. uniprot
Match: A0A7S2E620_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E620_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 5.380e-9
Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = 0
Query:  123 FPPDMASLSSENPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRQMVDDDHGGGLQPDAVTYTSLIKAAAR 210
            F  D+A++   N A   L +VFLVFQEMR  G +PD   YN L+  CA  G+F RA  V+ +++D D    L+P  V++  +++AA+R
Sbjct:  743 FSRDIANI---NDAKTLLVKVFLVFQEMRDAGAKPDTACYNVLLGACARAGDFTRARDVLNKLMDSDD---LEPTHVSWREMLRAASR 824          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10425.462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LSJ6_ECTSI9.910e-7486.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CEM1_9STRA1.340e-3854.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0XEC2_9STRA1.660e-2046.02Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A0G4F8K7_VITBC1.070e-1033.82Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S2E620_9STRA5.380e-940.91Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 146..185
e-value: 1.4E-4
score: 21.8
coord: 191..228
e-value: 0.0018
score: 18.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 161..189
e-value: 7.2E-5
score: 20.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 197..229
score: 8.67
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 158..188
score: 9.197
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 240..269
score: 7.476
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 127..269
e-value: 2.9E-28
score: 101.3
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 146..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10425contigD-dudresnayi_contig10425:4966..7062 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10425.462.1mRNA_D-dudresnayi_contig10425.462.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10425 4965..7062 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10425.462.1 ID=prot_D-dudresnayi_contig10425.462.1|Name=mRNA_D-dudresnayi_contig10425.462.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=269bp
RVVGPSVDDLDVAEQSGGIGGGDEGRVPSGVAAASTQGKDDFSLTEVGRL
GDYQAGPVSPAPSSSSTLPPELEVTMEETSAGRRTVVAADPPTVASAPFA
FAPSSSSSGSPSSTSPPPSSPLFPPDMASLSSENPALDNLFRVFLVFQEM
RSRGVRPDLRAYNALVNTCADLGEFDRALGVVRQMVDDDHGGGLQPDAVT
YTSLIKAAARAAPPRVKEAEEIFATMQQRTNHFSTFARPTEVTYAHLMNA
SIMAGDFNRALEVWRRQLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf